Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000021g0530 Nicotiana tabacum HOM05D004064 ORTHO05D009561 7.5e-21 103.2 64 100.0
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.6e-16 87.0 64 67.2
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.1e-15 85.1 64 65.6
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.1e-15 85.1 64 65.6
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.7e-15 84.0 64 67.2
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.0e-14 82.8 64 64.1
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-14 82.4 64 64.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-14 81.6 64 64.1
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-13 79.3 64 62.5
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.4e-13 77.4 64 76.6
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.7e-10 68.2 63 58.7
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.3e-09 65.9 61 55.7
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-09 65.5 63 57.1
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.0e-09 64.7 65 55.4
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.9e-09 64.3 65 55.4
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.9e-09 64.3 61 54.1
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.5e-08 62.4 61 50.8
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.5e-08 62.4 60 53.3
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 1.9e-08 62.0 61 50.8
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 2.5e-08 61.6 61 50.8
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 5.6e-08 60.5 62 50.0
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 7.3e-08 60.1 61 49.2
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.3e-08 60.1 61 49.2
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 9.5e-08 59.7 61 50.8
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 9.5e-08 59.7 61 47.5
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-08 59.7 61 50.8
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.2e-07 59.3 65 50.8
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.6e-07 58.9 61 49.2
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.1e-07 58.5 61 49.2
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-07 58.5 60 48.3
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 2.8e-07 58.2 61 49.2
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 3.6e-07 57.8 61 49.2
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-07 57.4 49 61.2
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.7e-07 57.4 65 49.2
CAN.G321.28 Capsicum annuum HOM05D004064 ORTHO05D009909 8.1e-07 56.6 61 49.2
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-06 56.2 56 51.8
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 1.1e-06 56.2 56 48.2
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-06 55.5 65 49.2
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-06 55.1 61 45.9
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-06 54.7 63 42.9
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.0e-06 54.3 65 46.2
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.2e-06 53.9 75 45.3
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 5.2e-06 53.9 60 46.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 6.8e-06 53.5 63 41.3
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 6.8e-06 53.5 52 51.9
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 8.9e-06 53.1 63 41.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-06 53.1 63 41.3
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 8.9e-06 53.1 63 42.9


User provided reference genes

Program Settings