Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 7.2e-278 959.9 477 100.0
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.2e-273 944.5 477 98.5
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 4.4e-259 897.5 477 92.0
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 1.3e-258 896.0 477 92.2
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 2.4e-257 891.7 477 91.8
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 3.3e-214 748.4 462 79.7
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 1.6e-213 746.1 459 79.5
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 3.1e-212 741.9 458 79.9
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 2.9e-210 735.3 464 78.9
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 4.2e-209 731.5 473 77.2
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 5.5e-209 731.1 471 79.2
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 2.7e-208 728.8 461 78.5
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 3.9e-207 724.9 446 79.4
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 3.9e-207 724.9 456 78.5
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 1.1e-206 723.4 462 75.3
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.4e-206 720.7 478 76.6
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 7.4e-206 720.7 453 76.4
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 9.7e-206 720.3 467 76.0
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 6.3e-205 717.6 460 76.3
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 1.1e-204 716.8 448 79.0
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 1.8e-204 716.1 455 78.5
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 2.4e-204 715.7 442 78.1
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 6.9e-204 714.1 442 77.4
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 2.0e-203 712.6 459 76.5
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 2.6e-203 712.2 436 79.6
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 7.7e-203 710.7 459 76.3
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 7.7e-203 710.7 455 76.9
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 1.0e-202 710.3 469 74.4
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 1.3e-202 709.9 469 74.4
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.2e-202 709.1 455 76.5
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 2.2e-202 709.1 455 76.5
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 3.8e-202 708.4 463 75.2
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 1.1e-201 706.8 468 74.4
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 1.9e-201 706.1 452 76.1
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 2.5e-201 705.7 448 77.2
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 5.5e-201 704.5 449 77.1
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 5.5e-201 704.5 464 75.0
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.2e-200 703.4 455 75.6
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.2e-200 703.4 455 75.6
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.6e-200 703.0 455 76.3
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 2.1e-200 702.6 474 73.2
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 3.6e-200 701.8 455 75.8
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 7.9e-200 700.7 462 75.1
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.0e-199 700.3 473 72.9
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 1.0e-199 700.3 458 76.2
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 1.4e-199 699.9 469 73.3
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 3.0e-199 698.7 465 74.6
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 3.0e-199 698.7 494 71.1
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 6.7e-199 697.6 451 75.4
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.1e-198 696.8 464 74.8
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 2.5e-198 695.7 462 75.3
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 5.7e-198 694.5 450 75.6
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 1.3e-197 693.3 455 74.3
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 2.8e-197 692.2 459 73.2
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 2.8e-197 692.2 459 75.2
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 3.7e-197 691.8 464 74.6
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 4.8e-197 691.4 477 72.3
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 6.3e-197 691.0 450 74.9
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 6.3e-197 691.0 450 74.9
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 8.2e-197 690.6 458 73.4
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 8.2e-197 690.6 469 72.3
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 1.4e-196 689.9 462 74.5
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 1.8e-196 689.5 469 72.7
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 3.1e-196 688.7 467 71.9
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 5.3e-196 688.0 464 73.9
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 9.1e-196 687.2 471 72.0
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.5e-195 686.4 447 75.6
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 1.5e-195 686.4 464 72.2
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 4.5e-195 684.9 463 73.0
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.3e-194 683.3 462 72.5
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 1.7e-194 682.9 471 72.2
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 2.9e-194 682.2 430 76.5
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 8.5e-194 680.6 459 72.8
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 1.9e-193 679.5 435 74.3
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 1.9e-193 679.5 433 76.0
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 1.9e-193 679.5 458 72.5
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 7.2e-193 677.6 461 74.0
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 7.2e-193 677.6 433 76.2
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 1.2e-192 676.8 444 73.9
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 2.1e-192 676.0 439 74.5
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 3.6e-192 675.2 433 75.8
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 6.1e-192 674.5 462 71.4
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 1.4e-191 673.3 459 73.0
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 8.8e-191 670.6 453 72.8
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 8.8e-191 670.6 466 71.7
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 3.3e-190 668.7 452 73.0
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 4.4e-190 668.3 463 70.6
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 7.4e-190 667.5 455 72.3
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 9.7e-190 667.2 461 70.9
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 1.7e-189 666.4 433 75.1
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 1.7e-189 666.4 433 75.1
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.2e-189 666.0 447 72.0
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 2.8e-189 665.6 459 70.8
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 3.7e-189 665.2 437 75.7
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 1.4e-188 663.3 464 70.5
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 1.8e-188 662.9 464 70.9
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 3.1e-188 662.1 465 70.8
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 9.1e-188 660.6 432 75.0
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 9.1e-188 660.6 464 69.8
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 1.2e-187 660.2 451 71.8
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 1.6e-187 659.8 477 68.8
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 2.6e-187 659.1 438 74.4
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 1.3e-186 656.8 464 69.8
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 1.3e-186 656.8 451 71.6
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 3.8e-186 655.2 465 68.6
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 1.6e-184 649.8 453 70.4
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 3.6e-184 648.7 451 68.7
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 1.0e-183 647.1 425 73.4
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 1.4e-183 646.7 452 71.2
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 3.0e-183 645.6 418 75.1
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 6.7e-183 644.4 466 70.4
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 8.8e-183 644.0 451 70.1
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 1.5e-182 643.3 448 70.1
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 6.3e-181 637.9 446 69.7
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 8.2e-181 637.5 436 71.1
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 3.1e-180 635.6 446 68.6
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 3.1e-180 635.6 448 68.5
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.2e-179 633.6 446 68.6
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.2e-179 633.6 446 68.6
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 2.7e-179 632.5 451 68.3
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 5.9e-179 631.3 404 76.5
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 7.7e-179 630.9 450 68.7
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.7e-178 629.8 403 75.7
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 2.9e-178 629.0 443 68.2
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.9e-178 629.0 447 68.9
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 5.0e-178 628.2 409 74.6
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 5.0e-178 628.2 384 79.9
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.1e-177 627.1 448 67.6
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 1.2e-176 623.6 431 69.4
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.5e-174 616.7 436 68.3
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 5.7e-174 614.8 425 69.4
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 7.5e-174 614.4 425 69.2
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 1.7e-173 613.2 425 69.2
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 6.3e-173 611.3 442 69.9
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.2e-171 607.1 452 67.7
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 2.1e-168 596.3 452 63.7
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 1.4e-167 593.6 367 77.9
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 2.6e-166 589.3 392 73.7
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 8.3e-165 584.3 375 75.7
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 3.8e-162 575.5 383 73.4
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 2.5e-161 572.8 393 72.3
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 6.8e-159 564.7 457 63.7
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 1.5e-150 537.0 373 71.3
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.9e-149 532.7 431 61.9
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 2.3e-146 523.1 442 62.2
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 8.1e-144 514.6 430 59.5
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 2.0e-142 510.0 420 59.3
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 1.1e-135 487.6 419 57.3
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 9.9e-134 481.1 452 58.6
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 3.9e-130 469.2 478 52.7
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 7.3e-121 438.3 283 75.6
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 2.2e-117 426.8 315 65.7
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 7.1e-116 421.8 446 49.8
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 1.3e-112 411.0 235 83.8
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 1.1e-105 387.9 426 46.5
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.1e-100 371.3 274 66.4
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 6.7e-98 362.1 231 74.0
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 3.7e-96 356.3 439 45.1
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 1.8e-95 354.0 381 46.2
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 9.1e-71 271.9 269 56.1
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 2.6e-70 270.4 165 78.2
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 1.3e-64 251.5 473 37.4
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 6.8e-58 229.2 155 73.5
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 4.5e-54 216.5 473 34.9
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.5e-46 189.9 113 75.2
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.5e-41 174.9 95 84.2
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.2e-40 171.0 129 68.2
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 1.3e-21 108.6 82 64.6
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 5.6e-20 103.2 96 54.2
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 1.1e-15 89.0 60 66.7
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 1.5e-12 78.6 79 54.4
Dinv35628 Davidia involucrata HOM05D001886 ORTHO05D005666 2.9e-08 64.3 200 28.0
MBI14_g24315_MAGBIO Magnolia biondii HOM05D001886 ORTHO05D005666 8.4e-08 62.8 195 28.2
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 4.2e-07 60.5 105 26.7
Medtr7g099870 Medicago truncatula HOM05D001886 ORTHO05D005666 7.1e-07 59.7 200 25.5
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 2.1e-06 58.2 43 65.1
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 4.6e-06 57.0 43 62.8


User provided reference genes

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