Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 0.0e+00 1123.2 551 100.0
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 8.1e-281 969.9 555 86.3
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 3.0e-267 924.9 580 82.6
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 4.5e-263 911.0 516 87.2
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.3e-257 892.9 554 81.8
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 6.1e-228 794.3 548 71.0
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 4.1e-224 781.6 529 71.8
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 8.5e-222 773.9 526 71.7
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 5.5e-221 771.2 520 71.7
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.6e-220 769.6 526 72.2
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 4.0e-219 765.0 527 71.0
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 4.0e-219 765.0 527 71.2
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.1e-216 756.9 527 70.6
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 1.1e-216 756.9 527 70.4
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.1e-216 756.9 521 70.6
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 4.1e-216 755.0 517 71.6
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 7.0e-216 754.2 527 70.4
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 7.0e-216 754.2 523 70.7
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 4.2e-213 745.0 526 69.4
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 2.1e-212 742.7 527 68.3
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 2.1e-212 742.7 526 70.2
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 6.1e-212 741.1 525 68.0
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 2.3e-211 739.2 529 68.2
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.0e-211 738.4 528 68.4
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.0e-211 738.4 529 68.1
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 5.2e-211 738.0 526 69.0
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 2.0e-210 736.1 528 68.2
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 7.5e-210 734.2 525 69.1
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 1.3e-209 733.4 530 68.1
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 1.7e-209 733.0 528 68.4
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 1.4e-208 729.9 527 67.9
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 1.8e-208 729.6 530 69.1
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 4.1e-208 728.4 566 64.7
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 2.0e-207 726.1 521 69.7
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 5.9e-207 724.5 522 69.9
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 7.7e-207 724.2 548 66.4
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 1.3e-206 723.4 530 67.5
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 1.5e-205 719.9 525 67.6
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.1e-204 716.1 580 62.6
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 6.1e-204 714.5 524 66.6
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 8.0e-204 714.1 550 65.6
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.0e-203 713.8 553 63.5
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 1.8e-203 713.0 517 68.1
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 3.0e-203 712.2 527 66.8
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 4.0e-203 711.8 525 66.3
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.8e-203 711.1 529 65.8
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.4e-202 708.8 522 67.8
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 7.0e-200 701.0 556 62.2
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 7.7e-199 697.6 563 62.2
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 6.6e-198 694.5 527 65.5
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 2.5e-197 692.6 526 64.3
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 3.6e-196 688.7 526 63.5
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.8e-195 686.4 525 64.0
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 3.0e-195 685.6 526 64.3
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 3.0e-195 685.6 504 66.1
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 4.4e-194 681.8 526 64.1
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 7.5e-194 681.0 525 64.2
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.7e-193 679.9 602 58.1
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 1.7e-193 679.9 531 63.7
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 4.9e-193 678.3 527 63.4
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 1.2e-191 673.7 527 63.2
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 1.9e-189 666.4 518 65.6
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 7.3e-189 664.5 524 64.7
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.5e-186 656.8 524 62.6
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.3e-185 653.7 526 63.3
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.2e-183 647.1 526 62.7
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.7e-183 646.0 572 57.9
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 9.5e-181 637.5 524 60.3
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 2.9e-177 625.9 516 62.6
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 1.1e-176 624.0 531 60.3
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.4e-176 623.6 531 60.5
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 2.4e-176 622.9 530 59.1
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 2.7e-175 619.4 525 60.6
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 3.0e-174 615.9 475 65.5
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 4.3e-173 612.1 528 60.0
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.0e-166 590.9 493 61.7
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 5.2e-163 578.6 522 55.9
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 3.8e-161 572.4 680 49.1
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 2.4e-160 569.7 421 67.0
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 9.3e-160 567.8 538 55.9
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 1.6e-159 567.0 536 56.5
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 7.8e-159 564.7 420 66.9
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 3.4e-154 549.3 419 66.1
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 3.8e-153 545.8 500 56.6
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 1.6e-151 540.4 548 54.0
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 8.1e-148 528.1 526 51.9
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 1.5e-146 523.9 526 50.6
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 2.7e-143 513.1 463 57.5
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 6.7e-142 508.4 545 49.5
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 2.2e-129 466.8 404 59.2
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 2.9e-113 413.3 263 71.1
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 2.0e-109 400.6 224 85.7
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 4.4e-109 399.4 264 68.2
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 2.6e-106 390.2 313 63.6
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 9.7e-101 371.7 240 71.2
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.4e-99 367.9 316 59.5
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.8e-99 367.5 732 34.6
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 2.8e-92 343.6 570 38.2
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 3.1e-91 340.1 320 56.2
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 1.0e-89 335.1 340 52.1
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 1.7e-84 317.8 184 85.3
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.5e-80 304.7 236 64.4
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 5.6e-80 302.8 555 32.3
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 2.9e-76 290.4 235 62.6
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 1.2e-71 275.0 210 61.9
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 4.7e-71 273.1 249 55.4
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 8.9e-70 268.9 270 48.1
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 5.0e-65 253.1 167 69.5
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 9.9e-61 238.8 140 75.7
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 6.0e-58 229.6 188 60.1
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 3.4e-53 213.8 264 44.7
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 1.1e-48 198.7 199 52.8
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 1.1e-48 198.7 308 36.7
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 1.5e-48 198.4 117 82.1
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 1.9e-48 198.0 173 61.8
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 6.0e-34 149.8 94 69.1
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 4.5e-29 133.7 150 50.0
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.7e-25 119.8 130 50.0
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 3.0e-17 94.4 46 91.3
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 1.3e-15 89.0 46 84.8
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 2.6e-13 81.3 70 54.3
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 5.9e-13 80.1 86 52.3
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 6.5e-12 76.6 64 57.8
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 1.1e-11 75.9 117 35.9


User provided reference genes

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