Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000019g0320 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-52 208.8 101 100.0
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-12 75.5 41 82.9
Nitab4.5_0001760g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-12 74.7 44 70.5
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-11 73.6 44 70.5
Nitab4.5_0009728g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-11 71.6 45 71.1
Nitab4.5_0007212g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-11 70.5 44 68.2
Nitab4.5_0001660g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-10 70.1 44 65.9
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 69.3 41 75.6
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-10 68.2 43 72.1
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-10 67.8 42 66.7
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 67.4 51 64.7
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 67.4 44 68.2
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 66.6 49 59.2
Nitab4.5_0001287g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 66.6 46 60.9
Nitab4.5_0004464g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 66.6 38 73.7
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 66.2 43 67.4
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.5 43 69.8
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.5 44 63.6
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.1 50 58.0
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.1 52 53.8
Nitab4.5_0016046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.1 43 58.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 64.7 43 67.4
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.7e-09 64.7 50 56.0
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-09 64.3 46 54.3
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-09 64.3 43 65.1
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 6.1e-09 64.3 50 56.0
Nitab4.5_0009838g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-09 64.3 39 71.8
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 63.9 50 58.0
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 63.9 50 60.0
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 63.9 43 62.8
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-08 63.5 43 58.1
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 63.2 44 65.9
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 63.2 43 67.4
Nitab4.5_0000925g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 62.8 37 75.7
Nitab4.5_0008738g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 62.8 45 60.0
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 1.8e-08 62.8 41 63.4
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.4 41 61.0
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 61.6 43 60.5
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 61.2 38 63.2
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-08 60.8 42 54.8
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-08 60.8 39 69.2
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-08 60.8 49 51.0
Nitab4.5_0002171g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 60.5 42 59.5
Nitab4.5_0005210g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 60.5 41 61.0
Nitab4.5_0000023g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 38 63.2
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 43 62.8
Nitab4.5_0027927g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.1 41 58.5
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.3 38 57.9
Nitab4.5_0003605g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.3 41 63.4
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.3 42 54.8
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.3 45 57.8
Nitab4.5_0007963g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.3 44 54.5
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 3.3e-07 58.5 44 54.5
Nitab4.5_0001360g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.5 42 57.1
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.5 42 57.1
Nitab4.5_0002880g0060 Nicotiana tabacum HOM05D011002 ORTHO05D000007 3.3e-07 58.5 39 61.5
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.5 42 57.1
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.5 45 55.6
Nitab4.5_0001432g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.2 44 54.5
Nitab4.5_0004621g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.2 38 60.5
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.2 40 57.5
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-07 57.8 36 66.7
Nitab4.5_0000032g0120 Nicotiana tabacum HOM05D000173 ORTHO05D000007 7.5e-07 57.4 38 63.2
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 57.0 38 60.5
Nitab4.5_0000422g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 57.0 42 57.1
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 57.0 38 57.9
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 56.6 43 51.2
Nitab4.5_0001046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 56.6 44 56.8
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 56.6 42 54.8
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 56.6 39 59.0
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 56.6 50 52.0
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.2 45 55.6
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.2 52 48.1
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.2 37 64.9
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.2 42 54.8
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 2.2e-06 55.8 44 54.5
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 55.8 50 48.0
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-06 55.8 44 54.5
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 55.8 42 54.8
Nitab4.5_0004489g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 55.8 42 59.5
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.1 40 62.5
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.1 39 56.4
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.8e-06 54.7 38 60.5
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 54.3 39 59.0
Nitab4.5_0007582g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 54.3 57 45.6
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 6.3e-06 54.3 42 57.1
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 6.3e-06 54.3 42 50.0
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 53.9 38 57.9
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 53.9 50 52.0
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 53.9 41 53.7
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 53.9 38 55.3
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 53.9 38 57.9


User provided reference genes

Program Settings