Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000018g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-91 339.3 172 100.0
Nitab4.5_0012357g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.4e-59 230.7 190 66.8
Nitab4.5_0000819g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.8e-35 152.1 156 58.3
Nitab4.5_0000002g0370 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.1e-34 147.9 127 62.2
Nitab4.5_0008044g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.0e-33 144.8 173 52.6
Nitab4.5_0000063g0350 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.7e-32 141.0 88 84.1
Nitab4.5_0002557g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-30 137.1 160 50.0
Nitab4.5_0000190g0240 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.2e-30 134.4 80 77.5
Nitab4.5_0002017g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-29 133.7 80 78.8
Nitab4.5_0007731g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.1e-29 132.1 165 46.7
Nitab4.5_0015674g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.3e-29 131.7 165 50.9
Nitab4.5_0002227g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.9e-29 131.3 157 51.0
Nitab4.5_0005146g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-28 129.4 164 50.0
Nitab4.5_0002006g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.2e-27 126.3 167 46.7
Nitab4.5_0004671g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.9e-27 125.9 165 47.9
Nitab4.5_0006693g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-26 122.9 150 50.0
Nitab4.5_0000153g0180 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-26 122.5 80 80.0
Nitab4.5_0001163g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.5e-26 121.7 150 49.3
Nitab4.5_0012198g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-25 120.2 154 48.1
Nitab4.5_0012463g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-24 116.7 157 47.8
Nitab4.5_0001831g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-24 115.5 72 81.9
Nitab4.5_0009254g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-24 115.5 80 66.2
Nitab4.5_0003255g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-23 112.8 154 46.1
Nitab4.5_0004031g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.3e-23 112.5 150 44.7
Nitab4.5_0003077g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-22 110.2 63 81.0
Nitab4.5_0000193g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.7e-22 109.0 100 61.0
Nitab4.5_0000508g0260 Nicotiana tabacum HOM05D003106 ORTHO05D282996 1.1e-21 107.5 126 50.0
Nitab4.5_0000619g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-21 107.1 154 46.8
Nitab4.5_0000440g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-21 106.3 153 43.1
Nitab4.5_0000445g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.1e-21 105.5 63 77.8
Nitab4.5_0000565g0220 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.9e-21 104.8 67 77.6
Nitab4.5_0008221g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-20 104.0 84 60.7
Nitab4.5_0008044g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.5e-20 102.1 84 63.1
Nitab4.5_0005054g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-20 101.7 157 45.2
Nitab4.5_0010666g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.7e-20 101.3 154 44.2
Nitab4.5_0003077g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-19 100.5 63 74.6
Nitab4.5_0004067g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.2e-19 99.8 84 59.5
Nitab4.5_0000619g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.0e-19 98.6 84 60.7
Nitab4.5_0000670g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.0e-19 98.6 84 60.7
Nitab4.5_0027224g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.0e-19 98.6 83 60.2
Nitab4.5_0005054g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.5e-19 97.8 146 46.6
Nitab4.5_0009904g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-18 97.1 85 54.1
Nitab4.5_0000039g0200 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.9e-18 96.7 58 79.3
Nitab4.5_0000145g0240 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-18 95.5 81 54.3
Nitab4.5_0002040g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-17 94.0 58 72.4
Nitab4.5_0002681g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-17 94.0 84 57.1
Nitab4.5_0004354g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-17 94.0 189 37.0
Nitab4.5_0000067g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-17 93.2 81 54.3
Nitab4.5_0002345g0130 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-17 93.2 95 55.8
Nitab4.5_0005146g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.7e-17 92.0 156 42.3
Nitab4.5_0000065g0100 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-17 91.3 76 67.1
Nitab4.5_0006716g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-17 91.3 153 43.1
Nitab4.5_0019730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-16 90.5 85 51.8
Nitab4.5_0000970g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.0e-16 89.4 72 56.9
Nitab4.5_0000970g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.0e-16 89.4 135 43.7
Nitab4.5_0000619g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-16 89.0 136 42.6
Nitab4.5_0007408g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-16 89.0 85 51.8
Nitab4.5_0003625g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.1e-16 88.6 64 71.9
Nitab4.5_0009941g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-15 87.0 72 56.9
PGSC0003DMG400008745 Solanum tuberosum HOM05D003106 ORTHO05D004173 3.3e-15 85.9 82 54.9
Nitab4.5_0009163g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.7e-15 85.1 72 56.9
Nitab4.5_0006091g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.7e-15 84.3 143 42.7
Nitab4.5_0023064g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.7e-15 84.3 140 40.0
Nitab4.5_0010129g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-14 83.6 102 47.1
Nitab4.5_0000039g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-14 82.8 61 67.2
Nitab4.5_0000109g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.7e-14 82.4 56 73.2
Sopen02g006680 Solanum pennellii HOM05D003106 ORTHO05D004173 3.7e-14 82.4 88 47.7
Nitab4.5_0006247g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.8e-14 82.0 70 55.7
Nitab4.5_0001167g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.2e-14 81.3 147 37.4
Nitab4.5_0008400g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.2e-14 81.3 108 45.4
Nitab4.5_0006358g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-13 80.9 61 60.7
Nitab4.5_0000606g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-13 80.1 64 65.6
Nitab4.5_0009941g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-13 79.7 84 53.6
Nitab4.5_0009941g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.1e-13 79.3 84 50.0
Nitab4.5_0002812g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.9e-13 78.2 62 61.3
Nitab4.5_0000392g0110 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.1e-13 77.8 60 60.0
Nitab4.5_0000561g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-12 77.4 116 40.5
Nitab4.5_0008400g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-12 77.4 82 53.7
Solyc05g021240.1 Solanum lycopersicum HOM05D003106 ORTHO05D004173 1.2e-12 77.4 88 45.5
Nitab4.5_0007510g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-12 77.0 81 49.4
Nitab4.5_0001881g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.5e-12 75.5 113 44.2
Nitab4.5_0000619g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-12 75.1 77 53.2
Nitab4.5_0000664g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-12 75.1 48 68.8
Nitab4.5_0007453g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-12 75.1 135 37.0
Nitab4.5_0010129g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-12 75.1 84 53.6
Nitab4.5_0007874g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.7e-12 74.7 62 58.1
Nitab4.5_0001025g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.0e-11 74.3 102 46.1
Nitab4.5_0002040g0040 Nicotiana tabacum HOM05D003106 ORTHO05D282640 1.3e-11 73.9 101 48.5
Nitab4.5_0003485g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.2e-11 73.2 126 43.7
Nitab4.5_0007692g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.5e-11 71.6 52 61.5
Nitab4.5_0002080g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.5e-11 71.2 69 50.7
Nitab4.5_0000878g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-10 70.9 118 39.8
Nitab4.5_0009730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-10 70.9 61 50.8
Nitab4.5_0003812g0080 Nicotiana tabacum HOM05D005753 ORTHO05D004173 2.5e-10 69.7 52 61.5
Nitab4.5_0009730g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-10 69.7 62 53.2
Nitab4.5_0011105g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-10 69.3 98 42.9
Nitab4.5_0002812g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-10 68.9 45 66.7
Nitab4.5_0001831g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.2e-10 68.2 56 62.5
Nitab4.5_0006406g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.2e-10 68.2 66 51.5
Nitab4.5_0014952g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.2e-10 68.2 44 68.2
Nitab4.5_0002434g0050 Nicotiana tabacum HOM05D003106 ORTHO05D283647 1.6e-09 67.0 78 51.3
Nitab4.5_0000779g0130 Nicotiana tabacum HOM05D003106 ORTHO05D283428 2.7e-09 66.2 44 68.2
Nitab4.5_0000696g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.6e-09 65.9 61 49.2
Nitab4.5_0001222g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.1e-09 65.1 63 54.0
Nitab4.5_0001465g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.1e-09 65.1 63 58.7
Nitab4.5_0000181g0150 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-08 63.9 60 58.3
Nitab4.5_0003361g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-08 62.4 69 46.4
Nitab4.5_0008583g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-08 62.4 53 52.8
Nitab4.5_0014390g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.2e-08 62.0 134 32.8
Nitab4.5_0005146g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-07 60.1 61 49.2
Nitab4.5_0010883g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-07 60.1 66 56.1
Solyc12g062447.1 Solanum lycopersicum HOM05D003106 ORTHO05D004173 2.0e-07 60.1 73 45.2
Nitab4.5_0003713g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-07 59.7 76 46.1
Nitab4.5_0011274g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-07 59.7 63 50.8
Nitab4.5_0003936g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.3e-07 59.3 44 68.2
Nitab4.5_0000504g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-06 57.0 30 80.0
Nitab4.5_0000483g0200 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.2e-06 56.6 30 80.0
Nitab4.5_0009730g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-06 56.2 40 60.0
Nitab4.5_0010413g0010 Nicotiana tabacum HOM05D003106 ORTHO05D284194 2.8e-06 56.2 86 46.5
Nitab4.5_0001417g0130 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.7e-06 55.8 49 59.2
CAN.G1332.4 Capsicum annuum HOM05D000158 ORTHO05D004173 6.3e-06 55.1 54 50.0
Nitab4.5_0001167g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.3e-06 55.1 98 37.8


User provided reference genes

Program Settings