Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 7.4e-76 287.3 150 100.0
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 4.4e-68 261.5 160 88.8
Sopen04g001500 Solanum pennellii HOM05D003853 ORTHO05D004171 1.8e-58 229.6 155 83.2
Solyc04g005480.1 Solanum lycopersicum HOM05D003853 ORTHO05D004171 3.1e-58 228.8 155 82.6
PGSC0003DMG400035643 Solanum tuberosum HOM05D003853 ORTHO05D004171 4.5e-57 224.9 153 79.7
Peaxi162Scf00930g00051 Petunia axillaris HOM05D003853 ORTHO05D004171 3.6e-38 162.2 126 73.8
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 3.5e-33 145.6 138 59.4
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 4.0e-29 132.1 127 61.4
Cfa008902 Carpinus fangiana HOM05D003853 ORTHO05D004171 3.7e-27 125.6 152 53.3
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 2.4e-26 122.9 144 54.2
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 1.2e-25 120.6 152 52.6
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 2.0e-25 119.8 135 55.6
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 1.0e-24 117.5 125 56.0
Sc04g0007740 Simmondsia chinensis HOM05D003853 ORTHO05D004171 3.0e-24 115.9 152 52.0
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 4.3e-23 112.1 139 51.8
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 9.5e-23 110.9 120 55.8
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 1.2e-22 110.5 136 55.1
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 1.1e-21 107.5 128 53.9
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 1.4e-21 107.1 127 52.8
Eucgr.B03178 Eucalyptus grandis HOM05D003853 ORTHO05D004171 1.4e-21 107.1 164 43.9
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 1.4e-21 107.1 144 47.9
Cc11_g12330 Coffea canephora HOM05D003853 ORTHO05D004171 2.3e-21 106.3 161 45.3
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 5.2e-21 105.1 117 53.8
Cpa.g.sc1.96 Carica papaya HOM05D003853 ORTHO05D004171 6.8e-21 104.8 108 55.6
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 1.2e-20 104.0 138 48.6
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 1.5e-20 103.6 134 48.5
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 1.5e-20 103.6 133 51.1
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 2.0e-20 103.2 119 52.9
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 5.8e-20 101.7 119 52.1
COL.COLO4_27925 Corchorus olitorius HOM05D003853 ORTHO05D004171 9.8e-20 100.9 150 44.7
QL03p070993 Quercus lobata HOM05D003853 ORTHO05D004171 2.2e-19 99.8 124 53.2
Potri.008G093200 Populus trichocarpa HOM05D003853 ORTHO05D004171 4.9e-19 98.6 135 48.1
SGA_v2.0_scaffold16G07759 Striga asiatica HOM05D003853 ORTHO05D004171 8.3e-19 97.8 151 43.7
MSTRG.7763 Avicennia marina HOM05D003853 ORTHO05D004171 1.1e-18 97.4 142 45.1
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 1.1e-18 97.4 123 52.8
Sed0005785 Sechium edule HOM05D003853 ORTHO05D004171 1.9e-18 96.7 138 50.7
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 3.2e-18 95.9 118 51.7
Nitab4.5_0000334g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 3.2e-18 95.9 145 41.4
Ah.03g139150 Amaranthus hybridus HOM05D003853 ORTHO05D004171 9.2e-18 94.4 138 46.4
AT2G03440 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 4.6e-17 92.0 125 48.0
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 4.6e-17 92.0 117 49.6
BcaB07g30301 Brassica carinata HOM05D003853 ORTHO05D004171 7.8e-17 91.3 152 42.8
AL5G13190 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 1.0e-16 90.9 162 40.1
ClCG05G023860 Citrullus lanatus HOM05D003853 ORTHO05D004171 1.0e-16 90.9 128 48.4
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.3e-16 90.5 79 62.0
BraA02t08366Z Brassica rapa HOM05D003853 ORTHO05D004171 1.3e-16 90.5 129 45.0
CsaV3_5G033160 Cucumis sativus L. HOM05D003853 ORTHO05D004171 1.7e-16 90.1 139 46.0
Sp1g12030 Schrenkiella parvula HOM05D003853 ORTHO05D004171 1.7e-16 90.1 121 47.1
BcaC03g17214 Brassica carinata HOM05D003853 ORTHO05D004171 2.3e-16 89.7 129 44.2
C02p51440 Brassica napus HOM05D003853 ORTHO05D004171 2.3e-16 89.7 129 44.2
BolC2t11232H Brassica oleracea HOM05D003853 ORTHO05D004171 2.3e-16 89.7 129 44.2
CSS0028215 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 2.3e-16 89.7 134 46.3
CARHR145780 Cardamine hirsuta HOM05D003853 ORTHO05D004171 2.3e-16 89.7 158 39.9
Sopen05g007400 Solanum pennellii HOM05D003853 ORTHO05D004171 3.0e-16 89.4 97 53.6
BcaC06g31183 Brassica carinata HOM05D003853 ORTHO05D004171 3.9e-16 89.0 136 44.1
Actinidia12318 Actinidia chinensis HOM05D003853 ORTHO05D004171 5.1e-16 88.6 128 50.0
CSS0045101 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 5.1e-16 88.6 138 44.9
COL.COLO4_27926 Corchorus olitorius HOM05D003853 ORTHO05D004171 5.1e-16 88.6 129 45.7
Sabra08G0070000 Salix brachista HOM05D003853 ORTHO05D004171 5.1e-16 88.6 127 50.4
QL03p071021 Quercus lobata HOM05D003853 ORTHO05D004171 6.6e-16 88.2 156 42.3
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 8.6e-16 87.8 146 41.1
Rhsim03G0019300 Rhododendron simsii HOM05D003853 ORTHO05D004171 1.9e-15 86.7 167 41.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.5e-15 86.3 155 40.0
Potri.010G161200 Populus trichocarpa HOM05D003853 ORTHO05D004171 2.5e-15 86.3 127 48.0
DCAR_027453 Daucus carota HOM05D003853 ORTHO05D004171 3.3e-15 85.9 136 45.6
A02p33450 Brassica napus HOM05D003853 ORTHO05D004171 4.3e-15 85.5 129 44.2
Peaxi162Scf00314g00022 Petunia axillaris HOM05D003853 ORTHO05D004171 5.6e-15 85.1 98 53.1
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 7.3e-15 84.7 129 45.0
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 7.3e-15 84.7 129 45.0
A06p43140 Brassica napus HOM05D003853 ORTHO05D004171 9.5e-15 84.3 165 38.8
BraA06t27202Z Brassica rapa HOM05D003853 ORTHO05D004171 9.5e-15 84.3 165 38.8
SGA_v2.0_scaffold287G47154 Striga asiatica HOM05D003853 ORTHO05D004171 9.5e-15 84.3 109 49.5
Thhalv10004968m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 1.2e-14 84.0 147 41.5
vmacro22355 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 2.1e-14 83.2 126 44.4
Sp2g14360 Schrenkiella parvula HOM05D003853 ORTHO05D004171 2.8e-14 82.8 160 39.4
BcaC06g33998 Brassica carinata HOM05D003853 ORTHO05D004171 3.6e-14 82.4 158 41.1
C07p33870 Brassica napus HOM05D003853 ORTHO05D004171 3.6e-14 82.4 158 41.1
BolC7t43901H Brassica oleracea HOM05D003853 ORTHO05D004171 3.6e-14 82.4 158 41.1
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 3.6e-14 82.4 144 41.7
MBI16_g00500_MAGBIO Magnolia biondii HOM05D003853 ORTHO05D004171 3.6e-14 82.4 91 54.9
BcaB03g13120 Brassica carinata HOM05D003853 ORTHO05D004171 4.7e-14 82.0 122 44.3
Sabra10G0122600 Salix brachista HOM05D003853 ORTHO05D004171 4.7e-14 82.0 130 46.2
Sabra10G0122700 Salix brachista HOM05D003853 ORTHO05D004171 4.7e-14 82.0 130 46.2
Thhalv10008975m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 6.2e-14 81.6 125 41.6
MSTRG.2322 Avicennia marina HOM05D003853 ORTHO05D004171 8.1e-14 81.3 120 46.7
Carub.0005s0241 Capsella rubella HOM05D003853 ORTHO05D004171 8.1e-14 81.3 166 37.3
BolC8t49263H Brassica oleracea HOM05D003853 ORTHO05D004171 1.1e-13 80.9 122 44.3
Zm00001eb007060 Zea mays HOM05D003853 ORTHO05D004171 1.1e-13 80.9 121 46.3
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 1.4e-13 80.5 111 49.5
QL03p071009 Quercus lobata HOM05D003853 ORTHO05D004171 1.4e-13 80.5 150 42.0
Sed0019389 Sechium edule HOM05D003853 ORTHO05D004171 1.4e-13 80.5 131 45.8
SEGI_33923 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 1.4e-13 80.5 133 41.4
Migut.E00060 Erythranthe guttata HOM05D003853 ORTHO05D004171 1.8e-13 80.1 120 47.5
CARHR014300 Cardamine hirsuta HOM05D003853 ORTHO05D004171 2.3e-13 79.7 114 45.6
AUR62007952 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.3e-13 79.7 112 48.2
Glyma.07G226567 Glycine max HOM05D003853 ORTHO05D004171 2.3e-13 79.7 129 44.2
Glyma.07G226633 Glycine max HOM05D003853 ORTHO05D004171 2.3e-13 79.7 129 44.2
Lj4g0005239 Lotus japonicus HOM05D003853 ORTHO05D004171 3.1e-13 79.3 123 43.1
BcaC07g38709 Brassica carinata HOM05D003853 ORTHO05D004171 6.8e-13 78.2 113 45.1
BraA08t35142Z Brassica rapa HOM05D003853 ORTHO05D004171 6.8e-13 78.2 128 42.2
SGA_v2.0_scaffold36G14434 Striga asiatica HOM05D003853 ORTHO05D004171 6.8e-13 78.2 92 51.1
ECA246G1290 Erigeron canadensis HOM05D003853 ORTHO05D004171 8.9e-13 77.8 81 51.9
AL1G25770 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 1.2e-12 77.4 122 42.6
MELO3C012136.2 Cucumis melo HOM05D003853 ORTHO05D004171 1.2e-12 77.4 141 43.3
Phvul.002G168000 Phaseolus vulgaris HOM05D003853 ORTHO05D004171 1.2e-12 77.4 116 44.0
Solyc05g012570.3 Solanum lycopersicum HOM05D003853 ORTHO05D004171 1.2e-12 77.4 88 50.0
BcaB03g13123 Brassica carinata HOM05D003853 ORTHO05D004171 2.6e-12 76.3 76 55.3
Carub.0001s1363 Capsella rubella HOM05D003853 ORTHO05D004171 2.6e-12 76.3 81 53.1
PGSC0003DMG400028384 Solanum tuberosum HOM05D003853 ORTHO05D004171 2.6e-12 76.3 166 36.7
Sc04g0007730 Simmondsia chinensis HOM05D003853 ORTHO05D004171 3.4e-12 75.9 109 43.1
vmacro22356 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 3.4e-12 75.9 167 37.1
MSTRG.735 Avicennia marina HOM05D003853 ORTHO05D004171 4.4e-12 75.5 74 59.5
CDE02G2907 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 4.4e-12 75.5 78 53.8
HanXRQChr10g0308121 Helianthus annuus HOM05D003853 ORTHO05D004171 5.8e-12 75.1 146 37.7
unitig_699.g19910 Utricularia gibba HOM05D003853 ORTHO05D004171 5.8e-12 75.1 106 45.3
VMungo0251G2653 Vigna mungo HOM05D003853 ORTHO05D004171 5.8e-12 75.1 129 40.3
Aa31LG4G16180 Aethionema arabicum HOM05D003853 ORTHO05D004171 7.5e-12 74.7 95 48.4
Migut.L01216 Erythranthe guttata HOM05D003853 ORTHO05D004171 9.9e-12 74.3 159 35.2
Peaxi162Scf00314g00031 Petunia axillaris HOM05D003853 ORTHO05D004171 9.9e-12 74.3 105 45.7
C08p16390 Brassica napus HOM05D003853 ORTHO05D004171 1.3e-11 73.9 81 51.9
Lj2g0020869 Lotus japonicus HOM05D003853 ORTHO05D004171 1.7e-11 73.6 115 43.5
Ah.03g139140 Amaranthus hybridus HOM05D003853 ORTHO05D004171 2.2e-11 73.2 86 50.0
A08p32180 Brassica napus HOM05D003853 ORTHO05D004171 2.2e-11 73.2 117 41.9
HanXRQChr15g0477051 Helianthus annuus HOM05D003853 ORTHO05D004171 2.2e-11 73.2 82 48.8
Actinidia28167 Actinidia chinensis HOM05D003853 ORTHO05D004171 2.9e-11 72.8 127 45.7
CAN.G1340.8 Capsicum annuum HOM05D003853 ORTHO05D004171 2.9e-11 72.8 171 35.1
QL03p070977 Quercus lobata HOM05D003853 ORTHO05D004171 2.9e-11 72.8 125 43.2
Nitab4.5_0015741g0010 Nicotiana tabacum HOM05D003853 ORTHO05D004171 3.7e-11 72.4 188 33.5
PSO017G6890 Papaver somniferum HOM05D003853 ORTHO05D004171 3.7e-11 72.4 140 41.4
HPP92_023639 Vanilla planifolia HOM05D003853 ORTHO05D004171 3.7e-11 72.4 136 37.5
Lalb_Chr17g0341041 Lupinus albus HOM05D003853 ORTHO05D004171 6.4e-11 71.6 103 43.7
MD13G1065700 Malus domestica HOM05D003853 ORTHO05D004171 6.4e-11 71.6 161 31.7
vmacro22354 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 6.4e-11 71.6 76 55.3
Lsat_1_v5_gn_4_11980 Lactuca sativa HOM05D003853 ORTHO05D004171 8.3e-11 71.2 88 46.6
AUR62003132 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.1e-10 70.9 119 41.2
ECA234G0349 Erigeron canadensis HOM05D003853 ORTHO05D004171 1.1e-10 70.9 131 38.2
Lalb_Chr05g0215091 Lupinus albus HOM05D003853 ORTHO05D004171 1.1e-10 70.9 70 58.6
TPR.G2267 Trifolium pratense HOM05D003853 ORTHO05D004171 1.1e-10 70.9 139 41.7
Lsat_1_v5_gn_3_56161 Lactuca sativa HOM05D003853 ORTHO05D004171 1.4e-10 70.5 83 48.2
Psat7g135200 Pisum sativum HOM05D003853 ORTHO05D004171 1.4e-10 70.5 153 39.9
SalBow2G1698 Salvia bowleyana HOM05D003853 ORTHO05D004171 2.4e-10 69.7 129 37.2
Glyma.20G027200 Glycine max HOM05D003853 ORTHO05D004171 3.2e-10 69.3 81 51.9
PSO478G4998 Papaver somniferum HOM05D003853 ORTHO05D004171 3.2e-10 69.3 98 48.0
MD16G1064200 Malus domestica HOM05D003853 ORTHO05D004171 5.4e-10 68.6 71 49.3
Medtr4g082860 Medicago truncatula HOM05D003853 ORTHO05D004171 5.4e-10 68.6 121 43.0
Prupe.1G282500 Prunus persica HOM05D003853 ORTHO05D004171 5.4e-10 68.6 131 40.5
AUR62003131 Chenopodium quinoa HOM05D003853 ORTHO05D004171 7.1e-10 68.2 123 42.3
BcaC07g38710 Brassica carinata HOM05D003853 ORTHO05D004171 9.2e-10 67.8 82 48.8
C08p16400 Brassica napus HOM05D003853 ORTHO05D004171 9.2e-10 67.8 82 48.8
BolC8t49264H Brassica oleracea HOM05D003853 ORTHO05D004171 9.2e-10 67.8 82 48.8
SalBow2G1975 Salvia bowleyana HOM05D003853 ORTHO05D004171 9.2e-10 67.8 111 40.5
AT1G13930 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 1.2e-09 67.4 121 39.7
SEGI_07999 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 1.6e-09 67.0 112 42.9
THA.LOC104805946 Tarenaya hassleriana HOM05D003853 ORTHO05D004171 1.6e-09 67.0 81 48.1
Ca_18813_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 2.1e-09 66.6 130 39.2
Psat7g135240 Pisum sativum HOM05D003853 ORTHO05D004171 2.1e-09 66.6 130 40.0
Zm00001eb334140 Zea mays HOM05D003853 ORTHO05D004171 3.5e-09 65.9 90 46.7
CANSAT64G1198 Cannabis sativa HOM05D003853 ORTHO05D004171 4.6e-09 65.5 99 46.5
AUR62007951 Chenopodium quinoa HOM05D003853 ORTHO05D004171 6.0e-09 65.1 120 40.8
FAN17G1589 Fragaria x ananassa HOM05D003853 ORTHO05D004171 6.0e-09 65.1 134 37.3
HPP92_023625 Vanilla planifolia HOM05D003853 ORTHO05D004171 6.0e-09 65.1 136 36.8
Os10g0330000 Oryza sativa ssp. japonica HOM05D003853 ORTHO05D004171 1.0e-08 64.3 73 45.2
TPR.G34052 Trifolium pratense HOM05D003853 ORTHO05D004171 1.0e-08 64.3 118 42.4
Ah.02g126530 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.7e-08 63.5 81 49.4
Sopen05g007410 Solanum pennellii HOM05D003853 ORTHO05D004171 3.9e-08 62.4 127 35.4
vmacro22463 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 3.9e-08 62.4 64 57.8
MD13G1065600 Malus domestica HOM05D003853 ORTHO05D004171 6.6e-08 61.6 72 52.8
FAN12G3704 Fragaria x ananassa HOM05D002141 ORTHO05D002119 8.6e-08 61.2 142 34.5
TPR.G34063 Trifolium pratense HOM05D003853 ORTHO05D004171 1.9e-07 60.1 79 46.8
A08p32170 Brassica napus HOM05D003853 ORTHO05D004171 3.3e-07 59.3 80 41.2
BraA08t35141Z Brassica rapa HOM05D003853 ORTHO05D004171 3.3e-07 59.3 80 41.2
Medtr4g082830 Medicago truncatula HOM05D003853 ORTHO05D004171 5.6e-07 58.5 96 42.7
Psat2g127960 Pisum sativum HOM05D003853 ORTHO05D004171 9.5e-07 57.8 115 40.9
Rhsim12G0134200 Rhododendron simsii HOM05D003853 ORTHO05D004171 1.6e-06 57.0 51 56.9


User provided reference genes

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