Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 1.6e-149 532.7 273 100.0
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 9.6e-142 506.9 280 92.5
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 5.5e-137 491.1 270 93.3
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 9.3e-137 490.3 270 92.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 6.0e-136 487.6 270 91.5
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.3e-134 481.9 275 89.1
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.7e-122 443.0 249 90.4
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 2.4e-116 422.5 270 78.9
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 3.2e-113 412.1 270 77.4
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 3.9e-111 405.2 270 76.3
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 5.1e-111 404.8 270 76.3
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 5.1e-111 404.8 270 76.7
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 8.8e-111 404.1 271 76.0
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 2.0e-110 402.9 267 75.3
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.0e-110 402.9 270 77.0
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.6e-110 402.5 270 74.8
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 9.7e-110 400.6 271 75.3
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.8e-109 399.1 270 74.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.8e-109 399.1 270 74.1
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 8.2e-109 397.5 290 71.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.1e-108 397.1 270 75.9
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.4e-108 396.7 270 74.1
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.4e-108 396.7 270 74.1
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 4.1e-108 395.2 271 76.0
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 7.0e-108 394.4 270 74.4
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 7.0e-108 394.4 271 76.0
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 9.1e-108 394.0 272 73.9
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.0e-106 390.6 266 75.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.0e-106 388.3 271 75.6
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 6.5e-106 387.9 270 73.3
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.9e-105 386.3 269 72.9
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 4.2e-105 385.2 270 73.3
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.6e-104 383.3 270 71.5
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 2.7e-104 382.5 270 73.3
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 8.0e-104 380.9 270 71.1
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.8e-103 379.8 270 71.5
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 2.3e-103 379.4 271 71.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.3e-103 379.4 272 72.4
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-103 379.0 251 74.9
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 3.0e-103 379.0 270 71.9
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 3.9e-103 378.6 272 72.8
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 6.7e-103 377.9 270 70.7
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 2.6e-102 375.9 270 70.7
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 3.3e-102 375.6 270 70.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 4.4e-102 375.2 272 69.9
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 5.7e-102 374.8 270 73.3
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 7.4e-102 374.4 271 72.0
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 2.2e-101 372.9 278 71.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 4.8e-101 371.7 272 72.1
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 4.8e-101 371.7 272 72.1
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.8e-100 369.8 274 69.3
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.8e-100 369.8 270 71.9
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.4e-100 369.4 272 71.7
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.1e-100 369.0 270 70.0
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 9.1e-100 367.5 270 68.9
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.6e-99 366.7 279 70.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.0e-99 366.3 270 69.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 2.0e-99 366.3 270 68.5
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 2.0e-99 366.3 274 69.0
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.6e-99 365.9 270 71.1
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 2.6e-99 365.9 270 70.7
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 5.9e-99 364.8 270 71.1
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.0e-98 364.0 270 68.5
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.7e-98 363.2 283 67.1
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.7e-98 363.2 278 69.4
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.2e-98 362.8 270 70.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 3.8e-98 362.1 270 68.1
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 3.8e-98 362.1 270 69.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 5.0e-98 361.7 270 71.1
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 6.5e-98 361.3 270 70.4
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 8.5e-98 360.9 270 68.1
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 3.2e-97 359.0 270 70.4
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 5.5e-97 358.2 354 57.6
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.1e-96 356.3 270 70.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 3.6e-96 355.5 270 68.9
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 4.0e-95 352.1 255 69.8
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 2.0e-94 349.7 269 68.8
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.6e-94 349.4 271 69.4
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 3.3e-94 349.0 269 68.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.7e-93 346.7 284 64.8
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 7.0e-92 341.3 269 67.7
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 1.7e-90 336.7 267 66.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 6.1e-88 328.2 268 65.7
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 2.6e-86 322.8 351 52.4
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.7e-85 320.1 270 65.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 3.7e-85 318.9 276 63.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.5e-83 312.4 267 63.3
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 6.6e-82 308.1 269 62.5
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 3.5e-75 285.8 270 56.7
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.1e-73 280.8 270 59.3
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.0e-71 274.2 200 67.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.0e-71 274.2 271 55.4
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 6.8e-71 271.6 298 55.0
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.2e-68 262.7 272 52.6
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 3.0e-66 256.1 176 75.6
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 3.0e-66 256.1 271 53.5
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.7e-59 233.0 267 51.3
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 5.8e-54 215.3 246 51.6
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.6e-43 180.6 218 45.4
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 2.3e-42 176.8 222 46.4
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.8e-40 169.1 104 78.8
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 6.9e-39 165.2 178 51.7
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.7e-37 160.6 115 65.2
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 2.9e-37 159.8 166 55.4
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.8e-31 140.6 132 57.6
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.8e-24 115.9 78 71.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 9.0e-15 85.1 153 38.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 7.1e-12 75.5 49 65.3
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 7.9e-11 72.0 51 64.7


User provided reference genes

Program Settings