Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000013g0160 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.8e-89 330.9 167 100.0
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.3e-43 180.3 185 50.3
Nitab4.5_0001109g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.2e-43 177.6 185 50.8
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.7e-40 169.9 181 50.3
Nitab4.5_0009593g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.7e-38 162.5 193 46.6
Nitab4.5_0009434g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.1e-37 158.3 148 55.4
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.7e-37 157.9 195 46.2
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.8e-35 151.8 172 50.0
Nitab4.5_0001914g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 4.8e-35 151.8 151 55.0
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.7e-32 143.3 186 45.2
Nitab4.5_0000077g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.5e-32 141.4 173 48.6
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.9e-31 139.8 162 47.5
Nitab4.5_0006538g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.5e-31 139.4 149 57.0
Nitab4.5_0021924g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.0e-29 132.5 187 40.1
Nitab4.5_0000330g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 9.1e-26 120.9 156 46.8
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.4e-25 119.0 165 40.6
Nitab4.5_0005190g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.0e-24 117.5 174 43.1
Nitab4.5_0007365g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.0e-24 117.5 159 48.4
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.7e-24 116.7 126 52.4
Nitab4.5_0010466g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.1e-23 114.0 142 41.5
Nitab4.5_0001024g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.5e-23 111.7 184 39.1
Nitab4.5_0000001g0290 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.4e-21 107.1 121 52.1
Nitab4.5_0003250g0070 Nicotiana tabacum HOM05D000060 ORTHO05D000434 2.6e-20 102.8 160 42.5
Nitab4.5_0000022g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.4e-20 102.1 90 64.4
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.7e-19 99.0 110 50.9
Nitab4.5_0000384g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.3e-18 95.1 155 43.2
Nitab4.5_0003525g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 7.7e-17 91.3 119 47.1
Nitab4.5_0001724g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.5e-15 86.3 165 41.2
Nitab4.5_0000409g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.5e-15 85.1 100 49.0
Nitab4.5_0003261g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.0e-13 80.9 94 47.9
Nitab4.5_0000104g0270 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.4e-13 80.5 137 39.4
Nitab4.5_0003401g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 5.2e-13 78.6 106 45.3
Nitab4.5_0002000g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.7e-12 75.1 100 41.0
Nitab4.5_0000253g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 9.7e-12 74.3 52 73.1
Nitab4.5_0000001g0300 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.4e-10 70.5 51 68.6
Nitab4.5_0013206g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.8e-10 70.1 71 53.5
Nitab4.5_0014106g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.4e-10 69.7 57 59.6
Nitab4.5_0008937g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.1e-10 67.8 89 41.6
Nitab4.5_0003824g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.2e-09 67.4 91 41.8
Nitab4.5_0000701g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.0e-09 66.6 60 58.3
Nitab4.5_0005377g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.0e-09 66.6 57 66.7
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.9e-09 65.1 165 32.7
Nitab4.5_0005377g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 7.7e-09 64.7 47 68.1
Nitab4.5_0001730g0180 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.3e-08 63.9 65 49.2
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 2.9e-08 62.8 171 28.7
Nitab4.5_0000409g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.9e-08 62.8 68 44.1
Nitab4.5_0000727g0060 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.5e-08 61.2 73 41.1
Nitab4.5_0000434g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.5e-07 59.7 102 38.2
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.6e-06 55.8 106 31.1
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 4.7e-06 55.5 75 42.7
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 6.1e-06 55.1 106 32.1
Sopen12g014500 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 55.1 80 42.5
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 6.1e-06 55.1 137 28.5
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 8.0e-06 54.7 106 32.1
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 8.0e-06 54.7 92 34.8
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.0e-06 54.7 131 29.8
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 8.0e-06 54.7 80 41.2
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 8.0e-06 54.7 80 41.2
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 8.0e-06 54.7 80 41.2
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 8.0e-06 54.7 80 41.2


User provided reference genes

Program Settings