Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 3.3e-217 758.1 378 100.0
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 4.6e-203 711.1 378 93.4
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 8.8e-186 653.7 378 85.7
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 1.4e-183 646.4 378 84.7
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 1.2e-182 643.3 378 84.4
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 4.5e-182 641.3 379 85.2
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 1.5e-172 609.8 379 80.7
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 4.4e-145 518.5 384 69.0
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 8.1e-139 497.7 372 68.8
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 8.4e-136 487.6 370 68.1
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 2.4e-135 486.1 370 68.4
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 4.4e-129 465.3 386 62.7
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 1.4e-127 460.3 346 65.9
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 4.2e-127 458.8 346 66.2
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 5.4e-127 458.4 382 60.2
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 9.3e-127 457.6 372 64.2
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 2.7e-126 456.1 371 62.8
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 2.3e-125 453.0 383 60.6
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 1.1e-124 450.7 377 62.6
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 1.9e-124 449.9 436 56.9
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 2.5e-124 449.5 375 61.9
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 3.3e-124 449.1 315 71.7
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 1.1e-122 444.1 370 63.0
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 9.0e-122 441.0 369 61.8
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 1.5e-121 440.3 373 61.1
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 2.0e-121 439.9 366 62.6
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 2.6e-121 439.5 368 62.8
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 5.8e-121 438.3 345 64.9
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 5.8e-121 438.3 372 60.2
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 3.8e-120 435.6 364 62.1
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 1.4e-119 433.7 371 60.9
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.4e-119 433.7 374 59.9
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 1.9e-119 433.3 370 62.7
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 5.4e-119 431.8 363 60.3
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 7.1e-119 431.4 377 59.7
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 9.3e-119 431.0 368 60.9
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 9.3e-119 431.0 377 58.9
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 9.3e-119 431.0 374 59.4
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 1.2e-118 430.6 368 60.6
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 4.6e-118 428.7 377 58.6
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 1.0e-117 427.6 360 60.6
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 3.0e-117 426.0 385 58.4
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 3.9e-117 425.6 376 62.0
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 8.7e-117 424.5 344 63.7
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 1.1e-116 424.1 358 60.6
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 2.5e-116 422.9 341 62.2
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 4.3e-116 422.2 368 59.8
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 1.6e-115 420.2 371 61.7
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 3.6e-115 419.1 403 55.1
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.1e-114 417.5 337 63.2
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 1.8e-114 416.8 329 64.4
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 2.4e-114 416.4 367 59.4
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 3.1e-114 416.0 356 59.8
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 4.0e-114 415.6 372 57.5
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 4.5e-113 412.1 340 59.1
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 7.6e-113 411.4 372 58.3
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 7.6e-113 411.4 362 59.9
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 1.3e-112 410.6 346 61.6
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 3.8e-112 409.1 371 60.1
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 4.9e-112 408.7 312 65.4
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 1.1e-111 407.5 342 60.2
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 1.4e-111 407.1 328 61.6
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 5.5e-111 405.2 368 57.3
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 7.1e-111 404.8 380 56.3
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 6.0e-110 401.7 376 57.7
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 2.3e-109 399.8 388 56.4
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 1.1e-108 397.5 374 57.8
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 2.5e-108 396.4 315 62.9
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 4.3e-108 395.6 317 63.1
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 4.3e-108 395.6 317 63.1
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 4.3e-108 395.6 354 57.3
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 4.3e-108 395.6 351 57.5
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 5.6e-108 395.2 364 57.4
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 2.8e-107 392.9 317 63.4
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 3.7e-107 392.5 385 56.4
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 1.4e-106 390.6 364 55.8
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 1.8e-106 390.2 321 62.9
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 2.4e-106 389.8 326 62.6
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 2.4e-106 389.8 368 56.0
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 1.2e-105 387.5 321 61.7
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 1.5e-105 387.1 320 61.6
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 2.6e-105 386.3 385 56.9
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 2.6e-105 386.3 337 59.9
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 4.5e-105 385.6 320 61.6
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 5.8e-105 385.2 319 60.8
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 7.6e-105 384.8 321 61.4
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 8.4e-104 381.3 320 60.6
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 1.1e-103 380.9 370 54.9
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 1.4e-103 380.6 377 55.2
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 1.9e-103 380.2 377 53.8
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 1.9e-103 380.2 371 55.8
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 5.5e-103 378.6 317 62.1
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 2.1e-102 376.7 373 54.4
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 2.7e-102 376.3 350 57.4
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 6.0e-102 375.2 376 54.3
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 1.0e-101 374.4 361 56.5
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 1.9e-100 370.2 377 52.8
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.6e-99 367.1 272 66.9
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 6.3e-99 365.2 375 54.7
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.1e-98 364.4 272 66.5
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 1.4e-98 364.0 296 60.1
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 2.0e-97 360.1 270 67.8
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 1.0e-96 357.8 350 54.3
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 5.0e-96 355.5 292 59.9
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 1.1e-95 354.4 272 65.8
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 3.9e-93 345.9 288 60.8
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 4.3e-92 342.4 318 59.4
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 3.7e-91 339.3 286 59.8
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 3.4e-89 332.8 316 55.1
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 5.9e-89 332.0 328 54.9
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 8.8e-85 318.2 293 55.3
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 2.6e-81 306.6 259 64.1
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 3.3e-76 289.7 328 50.3
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 5.3e-74 282.3 288 52.8
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 5.3e-66 255.8 287 48.8
arahy.Tifrunner.gnm1.ann1.70CJD0 Arachis hypogaea HOM05D005476 ORTHO05D006886 9.1e-66 255.0 240 57.5
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 7.7e-65 251.9 276 45.3
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 3.2e-63 246.5 276 45.3
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 3.2e-63 246.5 266 49.2
Pp3c7_18020 Physcomitrium patens HOM05D005476 ORTHO05D006886 9.4e-63 245.0 275 45.1
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 1.4e-61 241.1 187 64.2
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 4.0e-61 239.6 278 46.4
CBR_g23861 Chara braunii HOM05D005476 ORTHO05D006886 1.6e-57 227.6 289 43.6
Gohir.D05G089750 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.3e-48 198.0 174 58.0
A03p12050 Brassica napus HOM05D005476 ORTHO05D006886 4.0e-45 186.4 176 55.7
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 6.0e-33 146.0 144 52.1
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 2.1e-30 137.5 131 52.7
HanXRQChr16g0507541 Helianthus annuus HOM05D005476 ORTHO05D006886 6.8e-29 132.5 88 73.9
SalBow8G2493 Salvia bowleyana HOM05D005476 ORTHO05D006886 8.6e-24 115.5 179 41.3
BraA03t10517Z Brassica rapa HOM05D005476 ORTHO05D006886 1.1e-23 115.2 106 57.5
C03p15890 Brassica napus HOM05D000062 ORTHO05D021669 4.0e-21 106.7 122 50.8
BolC3t14020H Brassica oleracea HOM05D000062 ORTHO05D006886 4.0e-21 106.7 122 50.8
Actinidia23243 Actinidia chinensis HOM05D005476 ORTHO05D006886 7.1e-18 95.9 62 79.0
RcHm_v2.0_Chr7g0242751 Rosa chinensis HOM05D005476 ORTHO05D006886 2.3e-16 90.9 86 53.5
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 3.6e-14 83.6 106 47.2
Pp3c11_9540 Physcomitrium patens HOM05D005476 ORTHO05D006886 2.6e-12 77.4 94 41.5
SalBow5G5594 Salvia bowleyana HOM05D005476 ORTHO05D006886 7.6e-12 75.9 71 54.9
RcHm_v2.0_Chr6g0303391 Rosa chinensis HOM05D005476 ORTHO05D006886 6.0e-09 66.2 50 62.0
BolC4t22609H Brassica oleracea HOM05D005476 ORTHO05D032808 4.8e-06 56.6 47 63.8
TAR374G1348 Trochodendron aralioides HOM05D000559 ORTHO05D000596 6.2e-06 56.2 78 41.0
Mapoly0043s0096 Marchantia polymorpha HOM05D000559 ORTHO05D000596 8.1e-06 55.8 101 36.6


User provided reference genes

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