Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.3e-151 539.7 268 100.0
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.6e-136 489.6 270 91.5
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.4e-121 439.9 278 79.9
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 7.0e-121 437.6 280 80.4
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.2e-117 426.8 272 79.8
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 1.4e-113 413.3 272 77.9
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.9e-113 412.9 273 77.3
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 2.5e-86 322.8 280 60.0
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.2e-83 313.9 276 58.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.2e-80 303.9 191 78.5
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 7.4e-78 294.7 277 56.7
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.6e-75 286.2 272 55.1
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.9e-73 280.0 216 61.6
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.7e-72 276.2 274 54.7
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 6.0e-72 275.0 278 55.4
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.0e-71 274.2 214 61.7
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 8.7e-71 271.2 272 53.3
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.5e-70 270.4 272 53.3
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 3.3e-70 269.2 280 52.9
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 5.6e-70 268.5 273 52.4
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 7.4e-70 268.1 259 55.6
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 9.6e-70 267.7 286 50.0
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 9.6e-70 267.7 239 58.2
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 8.2e-69 264.6 214 62.1
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.1e-68 264.2 274 52.6
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.4e-68 263.8 211 61.1
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.8e-68 263.5 217 61.3
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 4.0e-68 262.3 214 61.7
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 4.0e-68 262.3 274 53.3
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 1.2e-67 260.8 253 54.9
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.5e-67 260.4 272 52.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.0e-67 260.0 222 61.3
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.6e-67 259.6 226 57.5
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 5.8e-67 258.5 206 62.6
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.0e-66 257.7 222 55.0
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.3e-66 257.3 218 57.8
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.7e-66 256.9 221 57.9
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 2.2e-66 256.5 261 52.5
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 2.9e-66 256.1 258 53.1
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 4.9e-66 255.4 281 50.9
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 6.5e-66 255.0 241 56.4
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 8.4e-66 254.6 257 52.9
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 8.4e-66 254.6 197 65.0
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.1e-65 254.2 222 58.1
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 5.5e-65 251.9 273 51.3
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.2e-64 250.8 237 54.4
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 3.5e-64 249.2 250 54.8
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 6.0e-64 248.4 271 49.8
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 7.9e-64 248.1 274 50.4
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 7.9e-64 248.1 270 51.9
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.3e-63 246.5 234 54.3
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 5.1e-63 245.4 276 50.7
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.1e-63 245.4 276 50.7
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 5.1e-63 245.4 270 50.0
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 6.7e-63 245.0 207 58.5
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 8.7e-63 244.6 234 53.8
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.5e-62 243.8 213 58.7
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.5e-62 243.0 225 52.4
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.5e-62 243.0 243 51.4
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 7.4e-62 241.5 277 49.1
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.4e-62 241.5 276 50.4
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 2.8e-61 239.6 254 49.2
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.7e-61 239.2 225 53.8
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 6.3e-61 238.4 276 49.6
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 6.3e-61 238.4 277 48.7
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 8.2e-61 238.0 208 57.2
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.1e-60 237.7 264 49.2
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.8e-60 236.9 237 50.2
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.8e-60 236.9 277 48.0
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 9.0e-60 234.6 222 55.0
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 9.0e-60 234.6 213 54.0
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.9e-57 226.9 222 52.3
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 2.5e-57 226.5 208 56.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-56 223.8 274 47.1
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 2.1e-56 223.4 266 48.1
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.6e-56 222.6 198 54.5
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.6e-56 222.6 198 54.5
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.6e-56 222.6 198 54.5
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.0e-55 221.1 273 45.4
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 1.0e-55 221.1 273 45.4
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.0e-55 221.1 208 54.3
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-55 220.3 274 46.4
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 3.9e-55 219.2 277 45.8
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.8e-53 213.0 237 47.7
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 3.7e-53 212.6 192 55.2
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 3.7e-53 212.6 259 44.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 8.2e-53 211.5 267 44.2
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.4e-52 210.7 192 53.6
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 1.8e-52 210.3 192 55.7
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 3.1e-52 209.5 273 45.4
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 4.1e-52 209.1 217 49.3
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 6.9e-52 208.4 222 50.5
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.0e-50 204.5 264 43.9
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 5.0e-50 202.2 229 47.6
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 5.5e-49 198.7 192 53.1
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.8e-47 193.7 157 61.1
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-46 191.0 205 50.7
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 4.8e-45 185.7 190 51.6
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 5.3e-44 182.2 221 44.3
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 7.0e-44 181.8 140 60.7
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 5.9e-43 178.7 160 57.5
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.7e-40 169.1 234 39.7
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.2e-39 165.6 213 40.4
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 9.4e-33 144.8 177 44.6
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 7.0e-28 128.6 199 32.7
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.5e-25 120.9 183 35.5
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 8.8e-23 111.7 181 36.5
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 8.0e-16 88.6 186 30.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.0e-14 84.0 53 67.9
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 2.0e-14 84.0 154 29.9
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.6e-14 83.6 122 36.9
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.8e-13 80.1 183 30.6
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-11 74.3 90 46.7
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.6e-11 74.3 53 62.3
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 2.7e-11 73.6 69 52.2
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 3.9e-10 69.7 69 49.3


User provided reference genes

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