Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000009g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.2e-68 261.2 124 100.0
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 2.6e-33 145.6 100 63.0
Nitab4.5_0005955g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 2.2e-32 142.5 93 67.7
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 4.8e-32 141.4 101 62.4
Nitab4.5_0010074g0040 Nicotiana tabacum HOM05D009389 ORTHO05D012243 5.9e-30 134.4 102 58.8
Nitab4.5_0001519g0220 Nicotiana tabacum HOM05D009389 ORTHO05D004636 2.0e-25 119.4 102 49.0
Nitab4.5_0002089g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 2.6e-25 119.0 84 64.3
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 5.7e-25 117.9 89 60.7
Nitab4.5_0002091g0100 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.5e-22 108.6 90 55.6
Nitab4.5_0000629g0070 Nicotiana tabacum HOM05D009389 ORTHO05D012243 7.7e-22 107.5 97 48.5
Nitab4.5_0006004g0030 Nicotiana tabacum HOM05D012456 ORTHO05D012243 3.8e-21 105.1 67 68.7
Nitab4.5_0002253g0030 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.5e-20 101.3 88 52.3
Nitab4.5_0007586g0060 Nicotiana tabacum HOM05D009389 ORTHO05D012243 5.5e-20 101.3 89 56.2
Nitab4.5_0004461g0050 Nicotiana tabacum HOM05D009389 ORTHO05D012243 5.7e-17 91.3 73 52.1
Nitab4.5_0001919g0190 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.7e-16 89.7 69 56.5
Nitab4.5_0010207g0010 Nicotiana tabacum HOM05D009389 ORTHO05D012243 4.8e-16 88.2 75 52.0
Nitab4.5_0005185g0060 Nicotiana tabacum HOM05D012456 ORTHO05D004636 3.5e-14 82.0 109 41.3
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 5.9e-14 81.3 102 35.3
Nitab4.5_0004525g0080 Nicotiana tabacum HOM05D009389 ORTHO05D012243 8.5e-13 77.4 73 46.6
Nitab4.5_0002499g0140 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.5e-12 74.7 55 56.4
Nitab4.5_0007618g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 5.5e-12 74.7 55 56.4
Nitab4.5_0000025g0460 Nicotiana tabacum HOM05D009389 ORTHO05D012243 9.4e-12 73.9 69 44.9
Nitab4.5_0007709g0050 Nicotiana tabacum HOM05D009389 ORTHO05D012243 1.0e-10 70.5 73 43.8
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.8e-10 69.7 114 38.6
Nitab4.5_0001175g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.3e-10 69.3 108 34.3
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.3e-10 69.3 99 34.3
Nitab4.5_0001684g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 4.0e-10 68.6 99 33.3
Nitab4.5_0013367g0010 Nicotiana tabacum HOM05D009389 ORTHO05D004636 4.0e-10 68.6 88 39.8
PGSC0003DMG400026063 Solanum tuberosum HOM05D009389 ORTHO05D004636 8.8e-10 67.4 99 32.3
CAN.G79.41 Capsicum annuum HOM05D001795 ORTHO05D001741 2.0e-09 66.2 101 33.7
PGSC0003DMG400029619 Solanum tuberosum HOM05D008381 ORTHO05D004636 8.3e-08 60.8 101 32.7
Nitab4.5_0004086g0090 Nicotiana tabacum HOM05D012456 ORTHO05D012243 1.4e-07 60.1 43 55.8
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 1.4e-07 60.1 111 29.7
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.8e-07 59.7 58 43.1
Nitab4.5_0005472g0060 Nicotiana tabacum HOM05D004616 ORTHO05D005860 5.4e-07 58.2 91 35.2
Nitab4.5_0005020g0020 Nicotiana tabacum HOM05D009389 ORTHO05D012243 7.0e-07 57.8 42 64.3
Nitab4.5_0000593g0290 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.2e-06 57.0 100 30.0
Nitab4.5_0013383g0010 Nicotiana tabacum HOM05D012456 ORTHO05D004636 1.2e-06 57.0 63 39.7
Peaxi162Scf00000g56011 Petunia axillaris HOM05D008306 ORTHO05D004636 1.6e-06 56.6 98 31.6
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.7e-06 55.8 85 31.8
Peaxi162Scf00049g00029 Petunia axillaris HOM05D005774 ORTHO05D006516 2.7e-06 55.8 111 32.4
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-06 55.5 99 28.3
Nitab4.5_0002269g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.5e-06 55.5 112 31.2
Nitab4.5_0004325g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.5e-06 55.5 97 32.0
PGSC0003DMG400019143 Solanum tuberosum HOM05D012456 ORTHO05D000022 4.5e-06 55.1 56 41.1
Nitab4.5_0002138g0090 Nicotiana tabacum HOM05D008306 ORTHO05D004636 7.7e-06 54.3 113 28.3
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 7.7e-06 54.3 71 36.6


User provided reference genes

Program Settings