Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-74 281.2 138 100.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-47 191.4 214 51.9
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-45 186.4 214 49.5
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-45 184.9 195 53.3
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-43 179.5 205 52.2
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-43 177.2 205 51.2
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-41 170.6 202 49.5
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-40 167.9 116 75.0
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-39 166.8 116 75.0
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-39 166.8 116 74.1
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-38 161.8 107 75.7
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.0e-38 161.4 116 72.4
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-36 156.0 115 70.4
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-35 153.3 168 50.6
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-35 150.6 183 49.2
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-34 150.2 103 76.7
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-34 149.8 191 47.6
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-33 145.6 159 49.1
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-32 142.5 116 67.2
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-31 139.8 117 65.8
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-31 139.8 159 50.9
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.7e-31 137.5 107 67.3
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-30 137.1 193 46.1
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-30 135.2 106 66.0
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-28 128.3 70 85.7
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.0e-28 127.5 70 85.7
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-24 115.9 87 69.0
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.2e-24 115.5 138 46.4
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-24 115.2 70 80.0
Nitab4.5_0002695g0020 Nicotiana tabacum HOM05D006864 ORTHO05D285932 6.1e-20 101.3 78 67.9
Nitab4.5_0000021g0990 Nicotiana tabacum HOM05D006864 ORTHO05D282769 2.9e-17 92.4 106 53.8
Nitab4.5_0000924g0030 Nicotiana tabacum HOM05D006864 ORTHO05D285280 4.1e-16 88.6 73 69.9
Nitab4.5_0007137g0050 Nicotiana tabacum HOM05D006864 ORTHO05D284446 1.3e-14 83.6 106 48.1
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 6.6e-14 81.3 43 86.0
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-12 76.6 158 32.3
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.1e-12 74.3 125 36.8
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-10 70.5 162 27.8
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-10 70.5 182 27.5
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.1 184 27.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-10 69.3 161 30.4
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.5e-10 67.8 182 25.3
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.8e-10 67.4 176 25.0
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.0 171 26.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.3e-09 67.0 97 34.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-09 66.2 104 35.6
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-09 65.9 97 33.0
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-09 65.1 103 35.0
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-09 65.1 169 29.0
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.3e-09 64.3 105 35.2
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-08 63.2 103 34.0
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-08 61.2 72 38.9
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.1e-08 61.2 95 40.0
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-08 60.8 94 34.0
Nitab4.5_0005092g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.5 173 26.0
Nitab4.5_0007137g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-07 60.1 31 80.6
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-07 60.1 103 34.0
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-07 60.1 94 38.3
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 2.1e-07 59.7 96 32.3
Nitab4.5_0002870g0050 Nicotiana tabacum HOM05D006864 ORTHO05D286406 2.7e-07 59.3 42 64.3
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.5e-07 58.9 131 31.3
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.6e-07 58.5 114 30.7
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-07 58.5 39 66.7
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.0e-07 58.2 103 34.0
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.8e-07 57.8 121 28.9
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.8e-07 57.8 116 28.4
Nitab4.5_0000021g0980 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-06 57.4 39 61.5
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-06 57.4 96 32.3
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-06 57.0 59 45.8
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-06 55.8 69 47.8
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-06 55.5 96 32.3
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-06 55.5 108 32.4
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 3.9e-06 55.5 93 34.4
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.1e-06 55.1 93 38.7
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 5.1e-06 55.1 145 24.8
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.6e-06 54.7 94 33.0
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.6e-06 54.7 94 33.0
Nitab4.5_0001329g0170 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.6e-06 54.3 56 42.9
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-06 54.3 94 34.0


User provided reference genes

Program Settings