Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 3.3e-253 877.9 436 100.0
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 3.1e-235 818.1 433 94.5
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.3e-225 786.2 425 92.0
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.2e-223 779.6 433 90.5
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.6e-223 779.2 433 90.5
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 6.1e-223 777.3 434 90.3
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 1.3e-185 653.3 432 73.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.5e-184 649.8 432 73.6
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 9.5e-184 647.1 432 72.7
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 8.0e-183 644.0 438 73.1
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.8e-182 642.9 441 72.1
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.3e-182 642.5 431 75.2
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 2.3e-182 642.5 430 72.8
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.4e-181 638.3 432 73.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 5.8e-181 637.9 434 72.6
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 2.2e-180 636.0 433 73.2
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.7e-180 635.2 434 73.7
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.4e-179 633.3 438 71.7
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.9e-179 632.9 433 70.9
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 3.2e-179 632.1 436 70.6
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.2e-179 632.1 430 71.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 5.4e-179 631.3 433 72.3
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 9.2e-179 630.6 428 68.5
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.2e-179 630.6 432 72.0
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.6e-178 629.8 430 69.5
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 3.5e-178 628.6 430 70.7
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.0e-177 627.1 431 68.9
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.3e-177 626.7 432 71.8
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.7e-177 626.3 432 71.5
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 2.3e-177 625.9 430 69.5
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.0e-177 625.5 432 71.5
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.0e-177 625.5 432 71.8
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 3.9e-177 625.2 433 72.3
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 1.1e-176 623.6 433 72.3
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 1.1e-176 623.6 435 71.0
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.3e-176 621.7 432 71.3
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 7.3e-176 620.9 433 70.9
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 7.3e-176 620.9 431 70.5
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.6e-175 619.8 436 71.3
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 2.1e-175 619.4 432 72.2
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.1e-174 617.1 421 73.2
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.3e-174 615.9 433 70.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 5.2e-174 614.8 436 70.6
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 5.2e-174 614.8 431 69.6
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 2.0e-173 612.8 432 73.1
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 9.9e-173 610.5 407 75.4
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.9e-172 609.0 431 67.7
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 4.9e-172 608.2 434 70.0
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 3.2e-171 605.5 433 70.2
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 4.6e-170 601.7 432 70.1
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.0e-169 600.5 433 69.3
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 5.1e-169 598.2 432 69.2
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 1.5e-168 596.7 456 68.6
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 5.6e-168 594.7 430 68.4
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 9.5e-168 594.0 431 66.6
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 4.7e-167 591.7 432 68.3
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.1e-166 590.5 450 64.7
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 2.4e-166 589.3 432 68.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 6.8e-166 587.8 431 65.7
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 8.9e-166 587.4 430 67.2
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 2.6e-165 585.9 405 73.6
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.4e-165 585.5 431 66.1
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 2.1e-162 576.2 431 64.5
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 5.6e-160 568.2 431 63.8
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.1e-158 563.9 435 63.9
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 9.0e-158 560.8 355 75.8
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 4.4e-157 558.5 430 63.0
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 2.2e-156 556.2 431 61.0
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 4.9e-156 555.1 431 60.8
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 4.9e-156 555.1 430 63.0
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 8.4e-156 554.3 436 64.4
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 3.2e-155 552.4 431 62.4
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 9.3e-155 550.8 431 60.6
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 3.5e-154 548.9 434 63.8
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 3.5e-154 548.9 430 60.7
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.5e-154 548.9 416 62.3
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.0e-153 547.4 430 59.1
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 3.9e-153 545.4 431 60.3
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 3.9e-153 545.4 431 60.3
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.5e-152 543.5 426 68.1
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.6e-151 540.0 430 59.5
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 8.1e-151 537.7 397 68.5
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 3.1e-150 535.8 422 60.4
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.5e-149 533.5 462 59.3
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 1.5e-149 533.5 443 64.1
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 5.8e-149 531.6 431 59.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.9e-148 529.3 329 76.9
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 9.3e-147 524.2 412 66.3
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 2.1e-146 523.1 388 69.6
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 3.3e-144 515.8 305 87.2
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.5e-141 506.9 419 60.4
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.8e-140 502.3 421 61.5
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 8.4e-140 501.1 422 59.0
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.4e-139 500.4 400 60.2
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.6e-138 496.9 431 57.3
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.1e-138 496.5 404 62.6
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 4.6e-138 495.4 425 63.1
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 6.0e-138 495.0 425 58.6
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-134 484.2 428 57.7
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 4.5e-133 478.8 403 59.8
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.8e-126 456.8 326 69.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 4.3e-120 435.6 264 80.7
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 9.4e-107 391.3 431 50.8
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 2.1e-98 363.6 319 53.9
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 9.1e-94 348.2 400 48.2
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 2.9e-92 343.2 218 71.1
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 5.5e-91 339.0 417 45.3
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 9.8e-88 328.2 320 54.4
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 7.5e-80 302.0 420 41.9
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.9e-77 292.4 307 48.9
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.8e-72 275.0 197 66.5
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 7.3e-67 258.8 135 91.9
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 2.0e-56 224.2 135 71.9
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.1e-54 216.5 171 60.8
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 6.2e-50 202.6 223 46.6
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.1e-49 200.3 160 63.1
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.3e-36 158.3 127 60.6
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.0e-36 157.1 127 60.6
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.1e-34 151.0 109 66.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 9.3e-30 135.6 134 53.7
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.1e-29 134.4 82 78.0
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 2.5e-27 127.5 92 76.1
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.1e-18 97.8 127 47.2
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 3.8e-15 87.0 67 56.7
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.5e-11 74.3 96 46.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.3e-11 73.9 67 50.7


User provided reference genes

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