Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-74 282.3 150 100.0
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-51 204.1 173 68.8
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.9e-48 193.7 198 60.1
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-47 191.4 193 60.6
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-47 190.7 198 61.6
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-46 190.3 193 62.7
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-46 189.5 175 65.1
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-46 188.0 198 60.1
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-45 185.3 176 65.9
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-45 184.1 198 58.6
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-44 183.7 198 59.6
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-43 179.1 195 60.0
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-43 177.9 181 63.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-43 177.6 198 57.1
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-43 177.2 198 58.6
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-43 177.2 193 59.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-43 177.2 175 64.6
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-42 175.3 169 65.1
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-41 171.8 170 61.2
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-41 171.0 167 64.1
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-41 171.0 196 58.2
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-40 170.2 151 65.6
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-40 169.5 193 56.0
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-40 167.9 183 59.0
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-40 167.5 178 60.1
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-39 165.2 156 62.8
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-39 164.9 193 56.5
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-38 162.5 181 57.5
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-38 160.6 182 56.0
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-37 158.3 175 58.9
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-36 156.8 167 61.7
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-36 155.2 180 57.8
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-36 154.8 164 61.6
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-35 151.0 174 54.6
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-34 148.3 181 54.7
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-34 147.5 157 60.5
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-33 147.1 192 52.6
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-31 139.8 147 57.1
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-31 139.0 174 51.7
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-31 138.7 147 59.9
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-31 137.5 170 55.9
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-30 134.0 179 52.5
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-29 133.3 170 51.8
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-29 132.1 166 55.4
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-28 127.9 129 60.5
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-27 127.1 127 62.2
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-27 124.8 124 63.7
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 8.2e-26 120.9 198 41.4
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-25 118.6 159 52.2
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-24 116.7 129 57.4
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-24 116.7 124 59.7
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-24 114.8 128 54.7
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-24 114.8 146 54.8
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-24 114.4 129 57.4
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-22 110.5 139 55.4
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-22 110.2 107 62.6
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-22 109.0 115 60.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-22 108.6 128 54.7
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-22 108.2 155 49.0
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-21 107.1 100 65.0
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-20 103.6 154 50.6
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-20 101.3 157 48.4
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-19 100.1 124 55.6
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-19 97.8 161 47.2
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-19 97.8 108 56.5
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.6e-18 96.7 109 55.0
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-18 95.9 174 39.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-18 94.4 129 50.4
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-18 94.4 136 48.5
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-17 93.6 111 54.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 5.3e-17 91.7 190 36.8
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 6.9e-17 91.3 185 36.2
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 9.0e-17 90.9 134 44.8
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-17 90.9 195 38.5
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-16 90.5 107 56.1
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-16 89.0 201 34.3
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-16 89.0 199 33.2
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 87.4 203 35.0
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.7e-15 86.7 165 40.6
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-15 86.7 109 52.3
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-15 85.9 128 47.7
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-14 84.0 173 38.7
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.9e-14 83.2 183 36.1
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-14 83.2 200 32.5
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.5e-14 82.8 200 35.5
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-14 82.0 200 35.0
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-14 81.3 106 50.0
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-13 80.5 157 38.9
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 80.5 46 87.0
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-13 79.0 97 53.6
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-12 77.0 128 41.4
Nitab4.5_0007170g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-12 77.0 44 88.6
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-12 75.5 181 30.4
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-12 74.7 186 31.2
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 1.1e-11 73.9 134 42.5
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-11 73.9 167 34.1
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-11 72.4 46 80.4
Nitab4.5_0001859g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-11 70.9 44 81.8
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-10 70.5 191 30.9
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-10 70.5 137 38.0
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-10 70.1 177 31.1
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-10 69.3 85 52.9
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.8e-10 68.6 76 55.3
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-10 68.6 200 31.5
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 6.3e-10 68.2 168 35.1
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-10 67.8 206 27.7
Nitab4.5_0011788g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-10 67.8 44 77.3
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 8.2e-10 67.8 170 33.5
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.4 83 49.4
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.4 160 34.4
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-09 66.6 122 42.6
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-09 66.2 135 34.8
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 3.1e-09 65.9 130 37.7
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-09 65.9 96 45.8
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-09 64.7 167 32.9
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 6.9e-09 64.7 206 28.6
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-09 64.3 187 33.7
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 118 38.1
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-08 63.5 206 28.6
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-08 62.4 94 48.9
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-08 62.0 206 29.1
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-07 60.8 113 43.4
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-07 60.8 113 43.4
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-07 60.1 72 50.0
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-07 58.5 74 51.4
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.0e-07 58.5 206 27.2
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 8.5e-07 57.8 59 55.9
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 8.5e-07 57.8 201 27.9
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-06 55.8 136 30.9
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-06 55.8 136 30.9
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-06 55.5 136 30.9
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.2e-06 55.5 186 28.5
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-06 55.5 138 38.4
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-06 55.1 184 28.3
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 7.2e-06 54.7 140 31.4
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 9.4e-06 54.3 125 32.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-06 54.3 206 25.7
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 9.4e-06 54.3 83 41.0


User provided reference genes

Program Settings