Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000008g0160 Nicotiana tabacum HOM05D020417 ORTHO05D000022 8.3e-128 460.3 219 100.0
Nitab4.5_0000230g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-22 110.5 82 61.0
Nitab4.5_0002707g0100 Nicotiana tabacum HOM05D020417 ORTHO05D049396 5.2e-21 105.5 59 84.7
Nitab4.5_0000009g0450 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.8e-19 99.0 75 61.3
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 4.8e-19 99.0 105 45.7
Nitab4.5_0005934g0070 Nicotiana tabacum HOM05D011511 ORTHO05D000022 3.1e-18 96.3 210 31.9
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-17 94.4 107 40.2
Nitab4.5_0003015g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-17 93.2 111 48.6
Nitab4.5_0001042g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-16 90.5 138 42.0
Peaxi162Scf00236g00081 Petunia axillaris HOM05D000155 ORTHO05D000022 2.2e-16 90.1 141 36.9
Nitab4.5_0000477g0190 Nicotiana tabacum HOM05D020417 ORTHO05D000022 3.8e-16 89.4 61 63.9
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 1.5e-15 87.4 135 37.0
Nitab4.5_0008964g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.5e-15 85.5 107 42.1
Nitab4.5_0007724g0010 Nicotiana tabacum HOM05D020417 ORTHO05D000022 7.2e-15 85.1 53 73.6
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 1.2e-14 84.3 135 36.3
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 1.6e-14 84.0 128 37.5
Nitab4.5_0004412g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-14 83.2 102 42.2
Peaxi162Scf01249g00004 Petunia axillaris HOM05D000155 ORTHO05D000022 3.6e-14 82.8 144 34.0
Nitab4.5_0000086g0320 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.1e-14 82.0 102 42.2
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.0e-13 79.3 184 29.9
Peaxi162Scf01052g00322 Petunia axillaris HOM05D003623 ORTHO05D035648 5.2e-13 79.0 103 36.9
Nitab4.5_0000025g0380 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.8e-13 78.6 55 69.1
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.8e-13 78.2 106 36.8
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 8.8e-13 78.2 103 36.9
Nitab4.5_0000571g0170 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-12 77.8 105 35.2
Nitab4.5_0001289g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.6e-12 76.6 135 34.8
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 4.4e-12 75.9 82 42.7
Nitab4.5_0007332g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.5e-12 75.1 104 32.7
Nitab4.5_0011501g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.8e-12 74.7 106 38.7
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-11 74.3 106 34.9
Peaxi162Scf01249g00027 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-11 74.3 144 33.3
Nitab4.5_0001856g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-11 72.4 106 33.0
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 4.9e-11 72.4 297 24.9
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 4.9e-11 72.4 99 35.4
Nitab4.5_0000190g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.3e-11 72.0 106 35.8
Nitab4.5_0002002g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.3e-11 72.0 162 29.0
Nitab4.5_0004217g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.3e-11 72.0 106 35.8
PGSC0003DMG400031354 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.3e-11 71.6 105 36.2
Nitab4.5_0005719g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-10 71.2 106 37.7
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-10 70.5 103 33.0
Nitab4.5_0003456g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.4e-10 68.9 113 31.9
CAN.G1715.2 Capsicum annuum HOM05D001135 ORTHO05D001005 1.2e-09 67.8 106 33.0
Nitab4.5_0004793g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-09 67.8 105 38.1
Nitab4.5_0000015g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-09 67.4 93 41.9
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-09 67.0 105 32.4
Nitab4.5_0006973g0070 Nicotiana tabacum HOM05D020417 ORTHO05D286827 2.0e-09 67.0 121 33.9
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-09 66.6 105 32.4
CAN.G229.11 Capsicum annuum HOM05D001426 ORTHO05D001389 3.5e-09 66.2 101 34.7
Nitab4.5_0000440g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.5e-09 66.2 114 33.3
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.5e-09 66.2 103 35.0
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 3.5e-09 66.2 107 31.8
Nitab4.5_0002372g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.5e-09 65.9 103 33.0
PGSC0003DMG400016975 Solanum tuberosum HOM05D001426 ORTHO05D001389 4.5e-09 65.9 107 34.6
Nitab4.5_0000758g0170 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.9e-09 65.5 109 32.1
Nitab4.5_0003985g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.9e-09 65.5 98 34.7
Solyc00g230060.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 7.8e-09 65.1 106 31.1
Nitab4.5_0000365g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-08 64.7 98 31.6
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-08 64.3 107 30.8
PGSC0003DMG400046426 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.3e-08 64.3 102 35.3
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-08 63.5 216 23.6
Nitab4.5_0000173g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-08 63.5 98 33.7
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 2.3e-08 63.5 103 32.0
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-08 63.2 97 30.9
Nitab4.5_0000101g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-08 63.2 108 33.3
Nitab4.5_0001704g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-08 63.2 102 31.4
Peaxi162Scf00366g00315 Petunia axillaris HOM05D000155 ORTHO05D000022 2.9e-08 63.2 89 39.3
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 2.9e-08 63.2 89 33.7
Nitab4.5_0000538g0090 Nicotiana tabacum HOM05D011660 ORTHO05D000007 3.8e-08 62.8 83 38.6
Nitab4.5_0002286g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-08 62.8 62 48.4
Nitab4.5_0006961g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-08 62.8 187 27.8
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-08 62.8 102 30.4
Nitab4.5_0009040g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.8e-08 62.8 81 38.3
PGSC0003DMG400018630 Solanum tuberosum HOM05D001426 ORTHO05D001389 3.8e-08 62.8 97 37.1
MBI05_g02408_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-08 62.4 86 38.4
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-08 62.4 130 29.2
Nitab4.5_0002654g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.0e-08 62.4 123 27.6
MBI11_g05090_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-08 62.0 123 30.9
MBI17_g07952_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-08 62.0 102 34.3
Nitab4.5_0000009g0390 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.6e-08 62.0 103 29.1
Nitab4.5_0000669g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.6e-08 62.0 92 37.0
TWI39G0789 Tripterygium wilfordii HOM05D000155 ORTHO05D000022 6.6e-08 62.0 100 36.0
Peaxi162Scf00524g00063 Petunia axillaris HOM05D001426 ORTHO05D001389 8.6e-08 61.6 123 37.4
Nitab4.5_0001099g0040 Nicotiana tabacum HOM05D034958 ORTHO05D000022 1.1e-07 61.2 87 39.1
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-07 61.2 99 33.3
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-07 61.2 105 36.2
Nitab4.5_0000062g0590 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-07 60.8 82 40.2
Nitab4.5_0000365g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-07 60.8 104 28.8
Nitab4.5_0008049g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-07 60.8 104 27.9
Peaxi162Scf00035g00127 Petunia axillaris HOM05D001426 ORTHO05D001389 1.5e-07 60.8 115 30.4
FvH4_5g27791 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-07 60.5 100 34.0
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 1.9e-07 60.5 110 33.6
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 1.9e-07 60.5 75 42.7
Nitab4.5_0000651g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.5e-07 60.1 98 32.7
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 3.3e-07 59.7 100 32.0
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 3.3e-07 59.7 100 32.0
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 3.3e-07 59.7 137 32.8
Peaxi162Scf01147g00005 Petunia axillaris HOM05D000155 ORTHO05D000022 3.3e-07 59.7 99 30.3
Nitab4.5_0000036g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.3e-07 59.3 102 32.4
Nitab4.5_0000493g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-07 59.3 89 33.7
Peaxi162Scf00251g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 4.3e-07 59.3 100 31.0
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 4.3e-07 59.3 94 37.2
MBI18_g29981_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.6e-07 58.9 98 30.6
Nitab4.5_0001021g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.6e-07 58.9 98 31.6
Nitab4.5_0009468g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.6e-07 58.9 88 34.1
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 7.3e-07 58.5 100 32.0
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 7.3e-07 58.5 100 32.0
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 7.3e-07 58.5 100 32.0
Nitab4.5_0000084g0250 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.3e-07 58.5 93 32.3
Nitab4.5_0000923g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-07 58.5 79 38.0
Nitab4.5_0001121g0040 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.3e-07 58.5 100 32.0
Nitab4.5_0003841g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-07 58.5 106 30.2
PGSC0003DMG400043208 Solanum tuberosum HOM05D000003 ORTHO05D000022 7.3e-07 58.5 56 42.9
Lj2P493T14 Lonicera japonica HOM05D000155 ORTHO05D000022 9.5e-07 58.2 102 30.4
MBI19_g32405_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.5e-07 58.2 98 30.6
Peaxi162Scf02408g00006 Petunia axillaris HOM05D001426 ORTHO05D001389 9.5e-07 58.2 110 33.6
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 9.5e-07 58.2 110 33.6
FvH4_4g13392 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-06 57.8 64 42.2
MBI18_g23800_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.8 91 35.2
Nitab4.5_0003295g0210 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-06 57.8 73 34.2
MBI01_g30858_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 100 31.0
Nitab4.5_0006044g0010 Nicotiana tabacum HOM05D001426 ORTHO05D030280 1.6e-06 57.4 92 31.5
Peaxi162Scf00064g00007 Petunia axillaris HOM05D000155 ORTHO05D000022 1.6e-06 57.4 104 27.9
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.6e-06 57.4 135 29.6
MBI06_g05819_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 57.0 98 33.7
Nitab4.5_0003667g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-06 57.0 98 31.6
Nitab4.5_0008654g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-06 57.0 62 40.3
Peaxi162Scf00075g00204 Petunia axillaris HOM05D001426 ORTHO05D001389 2.1e-06 57.0 134 33.6
Peaxi162Scf00688g10013 Petunia axillaris HOM05D000385 ORTHO05D000269 2.1e-06 57.0 106 30.2
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 57.0 108 28.7
PGSC0003DMG400012094 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.1e-06 57.0 102 29.4
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.1e-06 57.0 98 29.6
Lju1058C1G0 Lonicera japonica HOM05D000155 ORTHO05D000022 2.8e-06 56.6 139 23.7
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 56.6 100 30.0
Nitab4.5_0003368g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-06 56.6 62 40.3
Nitab4.5_0004197g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.8e-06 56.6 80 37.5
PGSC0003DMG400029986 Solanum tuberosum HOM05D011511 ORTHO05D000022 2.8e-06 56.6 48 45.8
FvH4_4g30261 Fragaria vesca HOM05D000003 ORTHO05D000006 3.6e-06 56.2 76 38.2
MBI18_g01154_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 56.2 98 29.6
Nitab4.5_0003465g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-06 56.2 92 32.6
Hund03119 Selenicereus undatus HOM05D000003 ORTHO05D050926 3.6e-06 56.2 84 42.9
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 4.7e-06 55.8 76 38.2
Nitab4.5_0000555g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.7e-06 55.8 94 30.9
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 4.7e-06 55.8 56 44.6
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 6.1e-06 55.5 100 32.0
Nitab4.5_0000278g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.1e-06 55.5 92 31.5
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 6.1e-06 55.5 111 30.6
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-06 55.5 128 30.5
PGSC0003DMG400009055 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.1e-06 55.5 99 29.3
Aqoxy4G02475 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 8.0e-06 55.1 106 34.0
MBI07_g03178_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-06 55.1 84 32.1
MBI18_g04361_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-06 55.1 109 31.2
Nitab4.5_0000024g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.0e-06 55.1 87 32.2
Nitab4.5_0000048g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.0e-06 55.1 92 30.4
Nitab4.5_0000252g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.0e-06 55.1 105 30.5
Nitab4.5_0000340g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.0e-06 55.1 94 27.7
Nitab4.5_0000397g0380 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.0e-06 55.1 94 28.7
Nitab4.5_0007215g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.0e-06 55.1 88 37.5


User provided reference genes

Program Settings