Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 0.0e+00 1603.6 980 100.0
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 0.0e+00 1310.8 935 88.1
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 0.0e+00 1115.5 888 75.8
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 2.3e-310 1068.9 846 77.1
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.9e-309 1065.8 835 77.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 3.9e-185 652.9 931 49.9
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.7e-156 557.8 933 46.9
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 4.2e-155 553.1 764 49.5
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 1.5e-149 534.6 905 46.2
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 2.9e-140 503.8 911 42.6
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 4.2e-139 500.0 919 45.7
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 4.7e-138 496.5 916 45.1
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.5e-136 491.5 918 43.4
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.6e-133 481.5 917 42.2
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 4.5e-133 479.9 922 45.3
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 6.5e-132 476.1 894 43.8
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 6.5e-132 476.1 893 44.2
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.5e-131 474.9 985 42.7
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.5e-131 474.9 945 43.9
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 3.0e-129 467.2 896 44.2
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 3.5e-125 453.8 801 47.1
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 1.3e-124 451.8 887 45.2
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 4.2e-123 446.8 871 45.0
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 4.0e-121 440.3 703 45.8
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 5.2e-121 439.9 565 50.4
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 8.8e-121 439.1 880 42.5
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.1e-118 432.2 918 42.7
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.8e-118 431.4 918 42.7
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 4.5e-117 426.8 856 41.4
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 2.3e-116 424.5 921 41.4
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 2.3e-116 424.5 866 41.8
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 5.0e-116 423.3 904 41.9
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 3.3e-115 420.6 922 43.0
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 3.3e-115 420.6 903 42.4
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 8.0e-114 416.0 884 42.1
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 6.3e-111 406.4 915 41.1
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 7.0e-110 402.9 897 42.3
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 2.7e-109 401.0 926 40.0
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 7.8e-109 399.4 907 40.5
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 2.3e-108 397.9 906 39.8
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.3e-108 397.9 803 40.8
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 1.1e-107 395.6 850 40.8
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 9.5e-107 392.5 874 41.0
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 6.1e-106 389.8 898 41.1
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 2.0e-104 384.8 945 38.3
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 4.4e-104 383.6 847 41.4
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 1.7e-103 381.7 867 40.1
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 3.7e-103 380.6 743 41.7
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.7e-103 380.6 952 37.1
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 3.2e-102 377.5 901 38.4
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 7.0e-102 376.3 844 39.1
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 1.2e-101 375.6 892 39.8
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 1.6e-101 375.2 912 37.8
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.0e-100 372.5 767 40.8
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.7e-100 371.7 869 39.6
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.6e-98 364.0 926 37.6
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 1.8e-97 361.7 943 37.0
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 2.3e-97 361.3 889 38.6
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 3.1e-97 360.9 888 39.5
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.7e-95 355.1 859 40.3
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 3.9e-92 344.0 909 39.7
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 2.5e-91 341.3 877 36.1
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.5e-91 341.3 713 44.3
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 1.6e-90 338.6 850 37.4
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 1.6e-90 338.6 256 71.9
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 2.1e-90 338.2 836 37.8
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 2.0e-88 331.6 879 37.4
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 6.4e-87 326.6 916 36.1
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 4.1e-86 323.9 899 38.8
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 2.1e-85 321.6 712 42.7
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 6.6e-84 316.6 876 37.1
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 5.6e-83 313.5 876 37.7
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 2.1e-82 311.6 585 43.8
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 1.2e-80 305.8 905 35.4
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.2e-77 295.8 780 37.1
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 2.7e-77 294.7 736 40.9
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 2.7e-77 294.7 908 37.8
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 7.8e-77 293.1 887 35.2
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 2.1e-74 285.0 782 37.1
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 2.8e-74 284.6 899 38.4
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 1.3e-68 265.8 432 44.4
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 5.3e-65 253.8 478 41.8
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 6.9e-57 226.9 944 31.6
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 3.8e-55 221.1 896 33.5
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 7.1e-54 216.9 916 30.3
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 2.3e-52 211.8 928 31.6
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 9.6e-51 206.5 367 42.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 6.9e-49 200.3 911 32.8
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.0e-48 198.7 894 33.1
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.4e-46 192.6 945 30.5
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 4.1e-41 174.5 871 31.5
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 9.0e-41 173.3 862 29.6
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 1.1e-38 166.4 407 36.4
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 7.4e-35 153.7 905 28.8
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 9.7e-35 153.3 930 29.9
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.7e-34 152.5 524 34.2
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.8e-33 149.1 927 28.6
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.5e-32 146.0 945 28.7
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 8.8e-28 130.2 253 39.9
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 2.6e-27 128.6 548 32.7
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 1.8e-25 122.5 708 31.8
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 2.2e-23 115.5 893 29.0
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 3.2e-22 111.7 392 32.9
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 4.7e-21 107.8 819 29.1
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 1.0e-20 106.7 905 28.8
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.8e-20 105.9 173 45.7
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 4.0e-20 104.8 889 28.2
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 4.0e-20 104.8 145 48.3
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 2.6e-19 102.1 226 40.7
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 1.1e-14 86.7 131 45.8
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 1.5e-14 86.3 869 25.3
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 4.2e-14 84.7 87 65.5
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 4.4e-11 74.7 114 45.6
Lj6P812T17 Lonicera japonica HOM05D002002 ORTHO05D008797 1.4e-09 69.7 161 39.8
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 7.2e-06 57.4 111 39.6


User provided reference genes

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