Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000007g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.4e-56 220.7 108 100.0
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-30 135.2 154 50.0
Nitab4.5_0000044g0610 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.3e-28 127.5 78 78.2
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.5e-24 115.5 220 36.8
Nitab4.5_0000159g0210 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.4e-24 113.6 207 37.7
Nitab4.5_0004496g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.6e-23 112.8 211 37.4
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-23 111.7 186 40.3
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-22 109.4 185 39.5
Nitab4.5_0009030g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.3e-22 109.0 199 38.2
Nitab4.5_0008559g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.1e-22 107.8 219 34.7
Nitab4.5_0003730g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 8.8e-22 107.1 199 36.7
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-21 105.9 219 35.2
Nitab4.5_0000709g0030 Nicotiana tabacum HOM05D000017 ORTHO05D002765 2.6e-21 105.5 219 35.2
Nitab4.5_0000067g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.3e-21 105.1 124 49.2
Nitab4.5_0002151g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.7e-21 104.4 145 43.4
Nitab4.5_0002612g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 9.7e-21 103.6 185 37.8
Nitab4.5_0004143g0050 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.3e-20 103.2 192 37.5
Nitab4.5_0000207g0340 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.8e-20 101.3 183 37.2
Nitab4.5_0010618g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.8e-20 101.3 199 36.2
Nitab4.5_0000095g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 6.3e-20 100.9 159 40.3
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.2e-20 100.5 220 34.1
Nitab4.5_0006644g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.4e-19 99.8 197 37.1
Nitab4.5_0001472g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.8e-19 99.4 124 46.8
Nitab4.5_0013575g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-19 98.2 146 43.2
Nitab4.5_0011126g0030 Nicotiana tabacum HOM05D007248 ORTHO05D000013 2.6e-18 95.5 129 45.7
Nitab4.5_0003033g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-18 94.7 90 58.9
Nitab4.5_0001446g0040 Nicotiana tabacum HOM05D007248 ORTHO05D000013 7.7e-18 94.0 118 47.5
Nitab4.5_0001030g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.2e-17 92.4 144 41.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-17 91.7 102 49.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.5e-17 90.5 203 34.5
Nitab4.5_0011727g0050 Nicotiana tabacum HOM05D000017 ORTHO05D002765 1.9e-16 89.4 144 40.3
Nitab4.5_0010319g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.2e-16 88.2 120 44.2
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-16 87.8 127 44.9
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-15 85.9 120 43.3
Nitab4.5_0002755g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-15 85.5 107 47.7
Nitab4.5_0000596g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-15 85.1 108 45.4
Nitab4.5_0000444g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.1e-15 84.3 114 45.6
Nitab4.5_0000376g0210 Nicotiana tabacum HOM05D007248 ORTHO05D000013 8.0e-15 84.0 45 86.7
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.0e-15 84.0 120 43.3
Nitab4.5_0011642g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.0e-15 84.0 120 42.5
Nitab4.5_0004211g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.3e-14 82.4 144 38.9
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.3e-14 82.4 114 44.7
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-14 81.6 102 46.1
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-13 80.1 114 44.7
Nitab4.5_0008752g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-13 79.0 107 48.6
Nitab4.5_0003264g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-13 78.6 110 43.6
Nitab4.5_0000980g0130 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.7e-13 77.8 101 44.6
Sopen09g020250 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-13 77.8 144 34.0
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 5.7e-13 77.8 144 34.0
Nitab4.5_0001179g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.7e-13 77.0 205 31.2
Nitab4.5_0000692g0140 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-12 76.6 120 42.5
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-12 76.3 116 42.2
Nitab4.5_0003037g0080 Nicotiana tabacum HOM05D007248 ORTHO05D000013 6.3e-12 74.3 73 57.5
Sopen08g004190 Solanum pennellii HOM05D000017 ORTHO05D000013 6.3e-12 74.3 144 33.3
Nitab4.5_0003533g0070 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-11 72.8 45 75.6
Nitab4.5_0026338g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-11 72.8 45 73.3
Nitab4.5_0008985g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.3e-11 71.2 45 73.3
Nitab4.5_0011716g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.0e-11 70.9 91 46.2
Nitab4.5_0005210g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.1e-11 70.5 45 77.8
Nitab4.5_0013025g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.1e-11 70.5 115 39.1
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-10 69.7 158 32.3
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-10 69.3 58 58.6
Sopen12g007420 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-10 68.9 122 37.7
Nitab4.5_0007068g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-10 68.2 45 68.9
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-10 67.4 117 38.5
Nitab4.5_0006458g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-08 63.5 45 68.9
Nitab4.5_0000431g0290 Nicotiana tabacum HOM05D007248 ORTHO05D036936 5.5e-08 61.2 35 80.0
Nitab4.5_0005258g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 5.5e-08 61.2 129 34.9
PGSC0003DMG400020001 Solanum tuberosum HOM05D007248 ORTHO05D000013 1.6e-07 59.7 45 64.4
Nitab4.5_0004510g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-07 58.9 48 56.2
Sopen10g020700 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-07 58.2 144 27.1
Sopen05g015880 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-07 57.4 45 55.6
Nitab4.5_0002373g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.4e-06 56.6 35 74.3
PGSC0003DMG400020974 Solanum tuberosum HOM05D007248 ORTHO05D002765 1.4e-06 56.6 45 62.2
Sopen04g016440 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-06 56.2 90 38.9
TWI59G0348 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.3e-06 55.8 72 41.7
Nitab4.5_0003264g0060 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.0e-06 55.5 39 64.1
Nitab4.5_0006375g0060 Nicotiana tabacum HOM05D000017 ORTHO05D002765 5.2e-06 54.7 127 26.8
Sopen06g011940 Solanum pennellii HOM05D000017 ORTHO05D000013 8.8e-06 53.9 39 59.0


User provided reference genes

Program Settings