Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.7e-181 637.9 358 100.0
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.1e-166 590.1 351 95.7
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 6.9e-156 554.3 354 87.9
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 5.6e-150 534.6 355 87.0
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 9.0e-140 500.7 359 82.7
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 3.1e-124 449.1 360 70.8
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.0e-114 417.5 363 63.6
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.2e-114 416.4 359 64.1
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 2.3e-111 406.4 356 62.4
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 5.2e-111 405.2 356 65.7
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.6e-110 402.9 364 66.2
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.8e-109 399.4 360 64.7
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 7.7e-107 391.3 356 64.3
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.9e-105 386.7 355 62.0
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.9e-105 386.7 361 64.0
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 2.7e-104 382.9 358 60.6
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 6.1e-104 381.7 361 60.7
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 1.8e-103 380.2 360 59.4
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 3.0e-103 379.4 353 64.0
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 4.0e-103 379.0 384 60.2
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 1.2e-102 377.5 367 64.3
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 2.0e-102 376.7 368 59.0
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.8e-101 372.9 366 60.1
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 6.3e-101 371.7 358 60.1
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.1e-100 370.9 360 61.4
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.4e-100 370.5 360 58.6
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 5.4e-100 368.6 358 64.2
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 7.0e-100 368.2 355 63.9
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 7.0e-100 368.2 362 60.8
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.6e-99 367.1 358 62.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 2.0e-99 366.7 362 56.6
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 7.7e-99 364.8 362 61.6
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.7e-98 363.6 362 58.0
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.7e-98 363.6 367 65.1
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 8.6e-98 361.3 366 57.7
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.1e-97 360.9 361 63.7
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 2.5e-97 359.8 362 58.3
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 2.5e-97 359.8 362 58.3
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 2.5e-97 359.8 412 57.3
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 5.5e-97 358.6 366 57.1
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.5e-97 358.6 366 57.1
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 2.1e-96 356.7 363 60.6
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.1e-96 356.7 366 57.1
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 3.6e-96 355.9 360 60.6
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 4.7e-96 355.5 338 62.7
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 1.0e-95 354.4 366 58.2
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 1.0e-95 354.4 366 58.2
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 1.8e-95 353.6 364 64.0
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 5.2e-95 352.1 368 55.7
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 8.9e-95 351.3 362 57.7
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.0e-94 350.1 364 63.7
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 2.0e-94 350.1 355 58.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 3.4e-94 349.4 361 66.2
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 5.7e-94 348.6 356 61.8
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 5.7e-94 348.6 368 56.8
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 9.8e-94 347.8 368 56.0
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.3e-93 347.4 356 61.5
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 2.2e-93 346.7 366 58.7
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.2e-93 346.7 375 59.2
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 3.7e-93 345.9 364 54.9
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 1.4e-92 344.0 363 59.2
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.4e-92 344.0 355 58.6
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 3.1e-92 342.8 356 59.3
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 7.0e-92 341.7 354 56.2
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 9.2e-92 341.3 360 59.4
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.2e-91 340.9 365 54.5
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.2e-91 340.9 363 55.9
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.6e-91 340.5 357 58.3
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 3.5e-91 339.3 368 54.3
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.9e-91 338.6 337 58.2
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 3.8e-90 335.9 287 67.9
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.9e-89 333.6 363 63.1
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 9.5e-89 331.3 374 55.6
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 2.1e-88 330.1 193 81.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 6.1e-88 328.6 350 54.6
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 8.0e-88 328.2 366 57.9
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 3.0e-87 326.2 361 52.9
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 4.0e-87 325.9 377 57.6
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 4.0e-87 325.9 352 57.1
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 5.2e-87 325.5 361 58.7
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 2.6e-86 323.2 338 55.3
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 2.6e-86 323.2 191 81.2
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 4.4e-86 322.4 361 53.5
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 4.1e-84 315.8 360 51.7
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 5.4e-84 315.5 351 55.0
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 3.5e-83 312.8 291 59.8
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 4.6e-83 312.4 244 67.2
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.5e-81 306.6 360 53.9
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 3.3e-81 306.2 354 57.1
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 4.3e-81 305.8 193 76.7
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 1.2e-80 304.3 330 57.0
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.6e-80 303.9 192 75.5
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 4.0e-79 299.3 250 62.4
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 4.0e-79 299.3 441 47.2
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.1e-76 291.2 399 55.4
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 4.9e-69 265.8 353 49.6
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 4.9e-69 265.8 290 54.8
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 1.1e-68 264.6 283 58.3
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 3.3e-65 253.1 289 58.5
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 8.1e-64 248.4 294 57.8
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 4.0e-63 246.1 287 58.5
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 1.5e-62 244.2 228 57.9
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.9e-61 240.0 195 62.6
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 2.7e-59 233.4 266 57.5
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 5.1e-58 229.2 289 60.6
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 2.2e-53 213.8 191 78.5
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 5.1e-50 202.6 191 51.8
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 4.3e-49 199.5 184 53.3
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 4.0e-47 193.0 173 53.2
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 5.3e-47 192.6 183 54.1
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 9.3e-44 181.8 193 46.6
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 3.4e-22 110.2 82 61.0
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 5.9e-22 109.4 131 42.7
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 6.1e-19 99.4 74 64.9
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 3.0e-18 97.1 130 42.3
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.7e-16 91.3 159 34.0
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 4.8e-16 89.7 49 85.7
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.1e-15 88.6 191 31.4
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 2.2e-13 80.9 46 87.0
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.7e-10 69.3 44 63.6
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.7e-08 64.7 93 43.0


User provided reference genes

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