Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000006g0700 Nicotiana tabacum HOM05D031049 ORTHO05D001422 1.8e-86 322.4 146 100.0
Nitab4.5_0001544g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.7e-44 183.0 137 62.8
Nitab4.5_0005614g0060 Nicotiana tabacum HOM05D031049 ORTHO05D001422 4.2e-43 178.3 148 63.5
Nitab4.5_0000765g0030 Nicotiana tabacum HOM05D031049 ORTHO05D286305 7.9e-34 147.5 113 65.5
Nitab4.5_0000032g0170 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.7e-33 144.4 81 85.2
Nitab4.5_0004906g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.7e-26 121.7 103 60.2
Nitab4.5_0000053g0240 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-25 120.2 100 59.0
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 8.5e-20 100.9 160 35.0
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-19 100.5 160 34.4
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-18 96.7 155 34.8
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 2.1e-18 96.3 160 35.0
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 2.7e-18 95.9 151 35.1
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 4.7e-18 95.1 140 36.4
Nitab4.5_0000488g0020 Nicotiana tabacum HOM05D031049 ORTHO05D001422 1.0e-17 94.0 53 79.2
Sopen07g017450 Solanum pennellii HOM05D008695 ORTHO05D001422 1.0e-17 94.0 160 33.1
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 3.0e-17 92.4 140 35.7
Sopen09g024660 Solanum pennellii HOM05D002047 ORTHO05D001422 5.2e-17 91.7 155 32.9
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-16 90.5 140 35.7
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 2.0e-16 89.7 159 32.1
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 3.3e-16 89.0 140 34.3
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 4.4e-16 88.6 160 32.5
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 9.7e-16 87.4 153 32.0
Nitab4.5_0000118g0050 Nicotiana tabacum HOM05D008695 ORTHO05D001422 3.7e-15 85.5 85 52.9
Nitab4.5_0003684g0020 Nicotiana tabacum HOM05D008695 ORTHO05D001422 1.4e-14 83.6 47 74.5
Nitab4.5_0000318g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 9.1e-14 80.9 123 35.8
Solyc04g025755.1 Solanum lycopersicum HOM05D002047 ORTHO05D001422 3.5e-13 79.0 78 47.4
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.7e-12 76.6 140 37.1
Nitab4.5_0000605g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.8e-12 75.5 133 30.1
Nitab4.5_0000116g0480 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.9e-11 73.2 81 43.2
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 3.2e-11 72.4 122 33.6
Nitab4.5_0000157g0060 Nicotiana tabacum HOM05D004926 ORTHO05D001422 4.2e-11 72.0 81 43.2
Nitab4.5_0004122g0030 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.7e-10 69.3 139 30.2
Nitab4.5_0005522g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.7e-10 69.3 80 47.5
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.6e-10 68.9 81 40.7
Nitab4.5_0000915g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.6e-10 68.9 81 39.5
Sopen05g025520 Solanum pennellii HOM05D000047 ORTHO05D000044 4.7e-10 68.6 81 40.7
Nitab4.5_0002031g0150 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-09 67.4 120 30.8
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.0e-09 67.4 116 34.5
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-09 67.0 106 35.8
Nitab4.5_0000023g0250 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.0e-09 65.5 123 30.9
Nitab4.5_0000087g0200 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.2e-09 65.1 133 26.3
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 8.8e-09 64.3 115 31.3
Nitab4.5_0003519g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-08 63.5 124 29.8
Nitab4.5_0028309g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-08 62.4 108 29.6
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 4.4e-08 62.0 77 37.7
Nitab4.5_0000006g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-08 61.6 120 31.7
Nitab4.5_0003379g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.7e-08 61.6 108 29.6
Nitab4.5_0004446g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.7e-08 60.8 121 28.9
Sopen03g009290 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-07 60.5 77 36.4
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-07 60.5 79 36.7
Nitab4.5_0001619g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-07 60.1 120 28.3
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 1.7e-07 60.1 126 27.0
Nitab4.5_0002147g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-07 59.7 120 28.3
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 2.2e-07 59.7 126 27.0
Nitab4.5_0001407g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.8e-07 59.3 27 88.9
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.8e-07 59.3 106 32.1
Nitab4.5_0003091g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.8e-07 58.5 120 29.2
Nitab4.5_0001560g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-07 58.2 120 29.2
Nitab4.5_0004477g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-07 58.2 124 29.8
Nitab4.5_0008613g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.3e-07 58.2 107 27.1
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 6.3e-07 58.2 126 26.2
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-07 58.2 126 27.0
Nitab4.5_0000765g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.2e-07 57.8 28 82.1
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 8.2e-07 57.8 27 85.2
Nitab4.5_0001877g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-06 57.4 124 26.6
Nitab4.5_0006110g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-06 57.4 120 27.5
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-06 57.4 126 27.0
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-06 57.4 126 27.0
Nitab4.5_0000093g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-06 57.0 120 26.7
Nitab4.5_0012783g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-06 57.0 120 26.7
Nitab4.5_0000727g0030 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.8e-06 56.6 81 40.7
Nitab4.5_0001165g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-06 56.6 117 26.5
Nitab4.5_0002622g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-06 56.6 121 26.4
Nitab4.5_0007497g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.8e-06 56.6 96 31.2
Nitab4.5_0000640g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-06 56.2 27 81.5
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 2.4e-06 56.2 123 28.5
Sopen02g001990 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.2 126 27.0
Nitab4.5_0001510g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-06 55.8 104 26.9
Nitab4.5_0001747g0060 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.1e-06 55.8 56 50.0
Nitab4.5_0003979g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-06 55.8 120 25.8
Nitab4.5_0007535g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.5 104 26.9
Nitab4.5_0010914g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.5 120 26.7
Nitab4.5_0005994g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.3e-06 55.1 57 36.8
Sopen05g009810 Solanum pennellii HOM05D002047 ORTHO05D001422 5.3e-06 55.1 126 26.2
CAN.G661.3 Capsicum annuum HOM05D000196 ORTHO05D000279 9.1e-06 54.3 71 35.2


User provided reference genes

Program Settings