Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000006g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-68 261.2 134 100.0
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-26 123.2 106 66.0
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-17 92.8 54 75.9
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-15 85.9 115 47.0
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-14 83.6 107 45.8
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-14 82.8 79 58.2
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-14 82.8 86 54.7
Nitab4.5_0000023g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-14 82.0 90 50.0
Nitab4.5_0001432g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-13 79.0 48 72.9
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-13 78.6 103 46.6
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-13 77.8 87 51.7
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-13 77.8 77 55.8
Nitab4.5_0001046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-12 75.9 93 44.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-12 75.9 102 40.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-12 75.1 55 56.4
Nitab4.5_0001360g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-12 74.7 48 66.7
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-12 74.3 102 40.2
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-11 73.6 57 56.1
Nitab4.5_0000659g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-11 73.2 43 79.1
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-11 73.2 90 47.8
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-11 72.8 87 48.3
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-11 72.8 95 49.5
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-11 72.8 59 50.8
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 72.4 67 58.2
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 72.4 78 47.4
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 72.4 48 64.6
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-11 72.4 114 36.0
Nitab4.5_0002171g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-11 72.0 98 45.9
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-11 71.6 101 41.6
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-11 71.6 95 45.3
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-11 71.2 77 50.6
Nitab4.5_0002880g0060 Nicotiana tabacum HOM05D011002 ORTHO05D000007 6.6e-11 71.2 96 45.8
Nitab4.5_0016046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-11 71.2 96 43.8
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-11 70.9 86 44.2
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-11 70.9 106 45.3
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 1.5e-10 70.1 83 47.0
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-10 70.1 108 40.7
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.3 40 70.0
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.3 73 52.1
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-10 68.6 101 41.6
Nitab4.5_0002956g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-10 68.6 68 47.1
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 4.3e-10 68.6 102 39.2
Nitab4.5_0001660g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-10 68.2 48 60.4
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-10 68.2 55 58.2
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 5.6e-10 68.2 70 44.3
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-10 67.8 63 54.0
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-10 67.8 124 37.1
Nitab4.5_0005210g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-10 67.8 51 54.9
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-10 67.8 72 50.0
Nitab4.5_0001760g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.0 82 43.9
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 66.6 43 65.1
Nitab4.5_0000090g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 66.2 105 36.2
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 66.2 89 43.8
Nitab4.5_0003605g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 66.2 84 47.6
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-09 65.9 48 56.2
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-09 65.9 87 37.9
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-09 65.9 106 36.8
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-09 65.9 43 60.5
Nitab4.5_0000028g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.5 64 53.1
Nitab4.5_0000459g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.5 45 60.0
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.5 51 56.9
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 65.5 72 44.4
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 65.1 56 46.4
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 65.1 88 42.0
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 76 44.7
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 76 44.7
Nitab4.5_0000654g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 63 50.8
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 113 38.1
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 116 38.8
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.2e-09 64.7 38 65.8
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.2e-09 64.7 104 39.4
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-09 64.3 109 34.9
Nitab4.5_0002737g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-09 64.3 78 46.2
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-09 64.3 83 42.2
Nitab4.5_0004621g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-09 64.3 62 50.0
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.1e-09 64.3 84 42.9
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 63.9 89 43.8
Nitab4.5_0001585g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 63.9 69 49.3
Nitab4.5_0007267g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 63.9 87 44.8
Nitab4.5_0006324g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 63.5 58 51.7
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 63.5 68 50.0
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 63.2 50 56.0
Nitab4.5_0007582g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 63.2 95 38.9
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 1.8e-08 63.2 102 39.2
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 62.4 48 58.3
Nitab4.5_0000541g0030 Nicotiana tabacum HOM05D000024 ORTHO05D283527 3.1e-08 62.4 72 54.2
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-08 62.4 54 50.0
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 62.0 74 43.2
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 62.0 45 55.6
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 62.0 48 58.3
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 62.0 106 34.0
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 62.0 75 48.0
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 61.6 115 36.5
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 61.6 110 36.4
Nitab4.5_0001696g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 61.6 115 38.3
Nitab4.5_0001987g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 61.6 48 52.1
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 5.2e-08 61.6 81 43.2
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-08 61.2 133 37.6
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 6.8e-08 61.2 36 63.9
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 1.2e-07 60.5 112 35.7
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 110 38.2
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 100 36.0
Nitab4.5_0007212g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 75 45.3
CAN.G529.7 Capsicum annuum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 46 56.5
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 45 55.6
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 98 40.8
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 75 40.0
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 85 38.8
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 121 34.7
Nitab4.5_0007963g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-07 59.7 48 54.2
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-07 58.9 110 34.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-07 58.9 135 33.3
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 58.5 46 52.2
Nitab4.5_0004489g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-07 58.2 63 50.8
Nitab4.5_0009728g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-07 58.2 51 47.1
Nitab4.5_0000031g0310 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-07 57.8 83 43.4
Nitab4.5_0000244g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-07 57.8 79 46.8
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-07 57.4 110 38.2
Nitab4.5_0002331g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-07 57.4 84 38.1
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.6 43 48.8
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-06 56.6 87 34.5
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.6 62 43.5
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 43 55.8
Nitab4.5_0000023g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 84 40.5
Nitab4.5_0000500g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 57 49.1
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 123 35.0
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 114 35.1
Nitab4.5_0004464g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 111 33.3
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-06 55.8 83 38.6
Nitab4.5_0000573g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-06 55.5 59 47.5
Nitab4.5_0000422g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-06 55.1 86 36.0
Nitab4.5_0009838g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-06 55.1 118 33.1
Nitab4.5_0000270g0200 Nicotiana tabacum HOM05D011002 ORTHO05D000007 6.4e-06 54.7 37 62.2
Nitab4.5_0002414g0080 Nicotiana tabacum HOM05D011951 ORTHO05D000007 6.4e-06 54.7 105 36.2


User provided reference genes

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