Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.4e-107 392.9 191 100.0
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.6e-66 256.5 152 85.5
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 5.1e-65 251.5 141 87.9
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 6.9e-62 241.1 141 84.4
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 1.2e-61 240.4 141 84.4
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 1.5e-61 240.0 141 83.7
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 3.8e-60 235.3 141 80.9
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 1.3e-57 226.9 152 75.0
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.3e-57 226.1 141 77.3
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 2.3e-57 226.1 133 82.7
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 3.0e-57 225.7 141 78.7
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 3.0e-57 225.7 141 78.0
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 3.9e-57 225.3 141 77.3
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 5.1e-57 224.9 141 78.0
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 5.1e-57 224.9 131 82.4
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 5.1e-57 224.9 141 77.3
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.1e-56 223.8 134 82.8
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 1.1e-56 223.8 141 75.9
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.5e-56 223.4 141 78.7
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 3.3e-56 222.2 141 77.3
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 4.3e-56 221.9 141 75.9
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 5.6e-56 221.5 141 76.6
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 7.4e-56 221.1 141 75.9
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 7.4e-56 221.1 141 74.5
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 7.4e-56 221.1 131 80.2
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 9.6e-56 220.7 141 75.9
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.6e-55 219.9 141 76.6
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 2.8e-55 219.2 141 76.6
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 2.8e-55 219.2 141 76.6
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.8e-55 219.2 141 76.6
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 6.2e-55 218.0 141 75.9
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 8.1e-55 217.6 141 75.2
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 8.1e-55 217.6 131 79.4
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 1.1e-54 217.2 141 73.8
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 1.1e-54 217.2 141 74.5
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.8e-54 216.5 141 73.8
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 1.8e-54 216.5 145 73.8
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.8e-54 216.5 141 73.8
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 2.4e-54 216.1 141 73.0
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.4e-54 216.1 141 72.3
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 4.0e-54 215.3 141 73.0
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.0e-54 215.3 141 73.0
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 4.0e-54 215.3 160 69.4
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 4.0e-54 215.3 141 74.5
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 5.3e-54 214.9 133 78.2
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 5.3e-54 214.9 133 78.2
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.6e-53 212.6 141 72.3
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 5.8e-53 211.5 141 72.3
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 7.6e-53 211.1 141 73.0
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 7.6e-53 211.1 141 73.0
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.7e-52 209.9 141 72.3
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.7e-52 209.9 141 72.3
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 1.7e-52 209.9 141 71.6
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 3.8e-52 208.8 118 83.1
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 8.4e-52 207.6 141 70.9
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.4e-51 206.8 141 74.5
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 2.5e-51 206.1 141 70.2
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 4.2e-51 205.3 141 70.2
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 5.5e-51 204.9 138 71.7
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 5.5e-51 204.9 141 70.2
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 7.1e-51 204.5 141 70.9
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 2.1e-50 203.0 131 74.8
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.7e-50 202.6 131 74.0
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 2.7e-50 202.6 141 70.9
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 2.7e-50 202.6 141 70.2
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 3.5e-50 202.2 141 70.2
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 4.6e-50 201.8 142 70.4
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 6.0e-50 201.4 131 74.0
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 7.9e-50 201.1 131 74.0
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 1.0e-49 200.7 131 74.0
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 1.0e-49 200.7 131 74.0
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 1.0e-49 200.7 131 74.0
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 1.3e-49 200.3 130 74.6
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 1.3e-49 200.3 127 74.8
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 1.8e-49 199.9 131 74.0
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 3.0e-49 199.1 131 73.3
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 3.9e-49 198.7 141 67.4
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 6.7e-49 198.0 131 72.5
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 6.7e-49 198.0 135 68.9
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.5e-48 196.8 143 69.9
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.5e-48 196.8 141 66.7
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 2.5e-48 196.1 157 63.1
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 4.8e-47 191.8 141 64.5
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 2.4e-46 189.5 141 66.7
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 6.9e-46 188.0 129 69.0
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 3.4e-45 185.7 141 65.2
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 2.2e-44 183.0 106 83.0
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 2.5e-43 179.5 120 72.5
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 5.5e-43 178.3 141 64.5
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 7.4e-40 167.9 194 50.0
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.3e-39 167.2 118 72.0
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 3.7e-39 165.6 141 63.1
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 4.8e-39 165.2 141 61.7
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 4.8e-39 165.2 141 61.7
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 1.4e-38 163.7 107 72.9
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 2.0e-37 159.8 141 58.2
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 2.6e-37 159.5 141 58.9
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 5.9e-37 158.3 141 58.2
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.9e-35 153.3 141 58.2
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 4.2e-35 152.1 141 54.6
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 8.8e-33 144.4 80 83.8
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 2.8e-31 139.4 75 84.0
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 4.8e-31 138.7 141 50.4
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 6.3e-31 138.3 89 75.3
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 1.1e-30 137.5 111 58.6
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 1.1e-30 137.5 80 78.8
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.4e-30 137.1 80 78.8
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 2.0e-29 133.3 99 67.7
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 3.4e-29 132.5 157 45.9
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 4.5e-29 132.1 148 45.3
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 3.8e-28 129.0 77 75.3
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 5.3e-22 108.6 112 42.9
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 5.9e-21 105.1 132 46.2
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.0e-17 94.4 55 80.0
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 1.8e-17 93.6 51 84.3
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 2.3e-17 93.2 55 76.4
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.0e-17 92.8 56 78.6
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.0e-17 92.8 56 78.6
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 8.8e-17 91.3 51 80.4
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 8.8e-17 91.3 56 76.8
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.5e-16 90.5 45 88.9
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 1.2e-13 80.9 44 79.5
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 9.4e-11 71.2 135 34.8


User provided reference genes

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