Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.4e-187 658.7 334 100.0
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.1e-179 631.3 330 97.3
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 1.3e-164 583.2 359 85.0
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 1.3e-137 493.4 359 73.0
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 9.6e-136 487.3 359 71.6
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 2.4e-134 482.6 360 70.6
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 3.1e-134 482.3 358 70.1
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 7.2e-131 471.1 357 68.1
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 2.1e-130 469.5 258 93.4
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 2.7e-130 469.2 326 73.9
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 1.0e-129 467.2 361 68.4
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 1.0e-129 467.2 357 68.3
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.3e-129 466.8 357 68.6
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 3.9e-129 465.3 357 67.2
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 1.3e-127 460.3 358 67.9
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 5.3e-126 454.9 355 67.9
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.2e-125 453.8 353 67.1
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 3.8e-124 448.7 355 66.5
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 1.1e-123 447.2 351 67.0
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 3.2e-123 445.7 397 61.7
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 4.2e-123 445.3 355 66.2
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 5.5e-123 444.9 375 65.6
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 5.5e-123 444.9 375 63.5
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 2.1e-122 443.0 372 64.0
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 2.1e-122 443.0 378 63.8
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 3.6e-122 442.2 349 66.5
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 4.6e-122 441.8 372 64.0
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 4.6e-122 441.8 349 67.0
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 6.1e-122 441.4 351 67.2
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 7.9e-122 441.0 354 65.8
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 7.9e-122 441.0 365 64.9
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 3.0e-121 439.1 362 63.5
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 3.9e-121 438.7 371 64.4
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 1.1e-120 437.2 363 64.5
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 2.5e-120 436.0 364 64.6
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 3.3e-120 435.6 344 66.6
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 3.3e-120 435.6 369 64.0
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 9.7e-120 434.1 366 63.9
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 2.8e-119 432.6 356 64.3
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 3.7e-119 432.2 355 65.1
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 3.7e-119 432.2 352 65.1
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 1.4e-118 430.3 356 64.0
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 1.8e-118 429.9 364 63.7
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 1.8e-118 429.9 376 61.7
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 2.0e-117 426.4 349 65.3
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 2.0e-117 426.4 349 65.3
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 3.4e-117 425.6 355 65.1
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.4e-117 425.6 349 65.3
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 4.5e-117 425.2 377 61.0
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 4.5e-117 425.2 354 64.4
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 4.5e-117 425.2 336 67.3
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 7.7e-117 424.5 354 64.7
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 1.3e-116 423.7 368 62.8
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 1.9e-115 419.9 369 59.9
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 7.2e-115 417.9 356 61.8
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 2.1e-114 416.4 366 60.7
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 2.7e-114 416.0 347 64.0
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 3.0e-113 412.5 348 62.6
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 5.1e-113 411.8 376 59.0
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 8.8e-113 411.0 346 62.7
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.6e-112 409.5 377 60.5
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 7.4e-112 407.9 349 62.5
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 2.8e-111 406.0 370 59.5
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 3.7e-111 405.6 347 60.8
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 1.4e-110 403.7 341 61.6
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 3.1e-110 402.5 346 62.1
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 4.1e-110 402.1 349 61.9
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 7.0e-110 401.4 349 62.2
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 2.0e-109 399.8 349 61.9
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 3.5e-109 399.1 345 62.0
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 1.3e-108 397.1 357 60.2
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 1.7e-108 396.7 364 57.1
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 2.2e-108 396.4 345 61.4
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 6.5e-108 394.8 346 61.0
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 4.2e-107 392.1 328 63.7
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 2.7e-106 389.4 328 64.3
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 3.6e-106 389.0 361 59.0
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 6.1e-106 388.3 344 61.3
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.4e-105 387.1 310 65.5
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.4e-105 387.1 310 65.5
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 5.2e-105 385.2 310 65.2
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 9.7e-104 380.9 308 64.3
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 3.7e-103 379.0 320 60.9
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 9.1e-102 374.4 367 55.3
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 1.9e-99 366.7 347 56.2
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 4.0e-97 359.0 374 52.9
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 2.4e-94 349.7 242 72.3
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 4.1e-94 349.0 259 72.2
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 1.5e-91 340.5 323 56.3
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 4.2e-91 339.0 369 54.2
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 4.7e-90 335.5 344 52.6
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 6.8e-89 331.6 240 71.7
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 4.4e-80 302.4 361 47.6
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 1.1e-78 297.7 324 54.6
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 5.9e-77 292.0 364 46.2
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 1.9e-75 287.0 364 43.4
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 1.2e-72 277.7 352 45.2
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 3.2e-54 216.5 241 47.3
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 3.9e-36 156.4 105 79.0
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 8.1e-34 148.7 83 83.1
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 9.9e-32 141.7 77 89.6
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.1e-30 138.3 83 85.5
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 4.8e-26 122.9 132 52.3
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 1.7e-23 114.4 191 35.1
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 6.0e-21 105.9 88 61.4
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 5.0e-15 86.3 68 61.8
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 5.1e-12 76.3 147 36.7
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 2.2e-10 70.9 65 58.5
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 6.5e-07 59.3 34 76.5
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 8.5e-07 58.9 164 31.1
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 8.5e-07 58.9 164 31.1
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 9.4e-06 55.5 30 83.3
BraA09t38215Z Brassica rapa HOM05D006535 ORTHO05D033081 9.4e-06 55.5 30 83.3


User provided reference genes

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