Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000004g0200 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.6e-62 241.9 124 100.0
Nitab4.5_0008111g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.6e-48 196.1 123 80.5
Nitab4.5_0007363g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.7e-43 178.7 123 71.5
Nitab4.5_0010476g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.1e-43 177.6 123 73.2
Nitab4.5_0010234g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 8.8e-42 173.7 123 72.4
Nitab4.5_0002978g0070 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.1e-41 173.3 123 72.4
Nitab4.5_0000779g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 3.7e-40 168.3 119 75.6
Nitab4.5_0006719g0040 Nicotiana tabacum HOM05D008313 ORTHO05D002376 3.7e-40 168.3 123 69.9
Nitab4.5_0002103g0060 Nicotiana tabacum HOM05D008313 ORTHO05D002376 8.2e-40 167.2 123 71.5
Nitab4.5_0019451g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.6e-38 162.2 120 70.0
Nitab4.5_0002329g0170 Nicotiana tabacum HOM05D008313 ORTHO05D002376 5.5e-36 154.5 123 65.9
Nitab4.5_0005267g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.7e-34 147.5 95 76.8
Nitab4.5_0001142g0050 Nicotiana tabacum HOM05D008313 ORTHO05D002376 3.3e-33 145.2 95 77.9
Nitab4.5_0005752g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.2e-32 142.5 105 68.6
Nitab4.5_0001243g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.8e-32 142.1 123 62.6
Nitab4.5_0002472g0080 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.3e-32 141.0 87 83.9
Nitab4.5_0004111g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.3e-29 133.3 123 59.3
Nitab4.5_0001305g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.9e-29 132.1 105 67.6
Nitab4.5_0004144g0050 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.5e-29 131.0 107 66.4
Nitab4.5_0002234g0110 Nicotiana tabacum HOM05D008313 ORTHO05D002376 4.2e-28 128.3 86 70.9
Nitab4.5_0008510g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 4.7e-27 124.8 86 76.7
Nitab4.5_0000578g0040 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.1e-27 124.4 120 59.2
Nitab4.5_0002311g0070 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.1e-27 124.4 109 65.1
Nitab4.5_0000044g0540 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.3e-26 122.5 94 70.2
Nitab4.5_0005047g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.5e-25 119.8 86 66.3
Nitab4.5_0008194g0070 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.3e-24 116.7 91 67.0
Nitab4.5_0007610g0040 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.4e-23 112.5 78 76.9
Nitab4.5_0000183g0050 Nicotiana tabacum HOM05D008313 ORTHO05D002376 3.1e-23 112.1 86 67.4
Nitab4.5_0007880g0080 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.0e-22 109.4 96 65.6
Nitab4.5_0003841g0100 Nicotiana tabacum HOM05D008313 ORTHO05D002376 4.5e-22 108.2 87 66.7
Nitab4.5_0004268g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 4.5e-22 108.2 83 66.3
Nitab4.5_0009553g0040 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.9e-21 105.5 68 79.4
Nitab4.5_0001645g0110 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.5e-20 103.2 61 86.9
Nitab4.5_0003671g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.5e-20 103.2 83 62.7
Nitab4.5_0000868g0060 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.5e-20 102.4 126 48.4
Nitab4.5_0011597g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.2e-19 100.1 120 49.2
Nitab4.5_0008908g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 6.1e-19 97.8 57 87.7
Nitab4.5_0000553g0090 Nicotiana tabacum HOM05D008313 ORTHO05D002376 8.0e-19 97.4 56 82.1
Nitab4.5_0006496g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 8.0e-19 97.4 76 69.7
Nitab4.5_0006434g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.0e-18 97.1 74 64.9
Nitab4.5_0002208g0040 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.8e-18 96.3 61 80.3
Nitab4.5_0010916g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.8e-18 96.3 87 58.6
Nitab4.5_0007610g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.0e-17 92.8 78 67.9
Nitab4.5_0016645g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 7.5e-17 90.9 124 45.2
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-15 87.0 102 51.0
Nitab4.5_0002671g0060 Nicotiana tabacum HOM05D008313 ORTHO05D002376 3.5e-14 82.0 54 81.5
Nitab4.5_0004255g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.0e-13 80.5 53 81.1
Nitab4.5_0002685g0010 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.3e-13 80.1 57 78.9
Nitab4.5_0000242g0050 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.5e-12 75.9 53 75.5
Solyc10g039297.1 Solanum lycopersicum HOM05D008313 ORTHO05D002376 2.5e-12 75.9 88 48.9
Nitab4.5_0001664g0070 Nicotiana tabacum HOM05D008313 ORTHO05D002376 7.2e-12 74.3 52 73.1
Nitab4.5_0004134g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 7.2e-12 74.3 66 59.1
Nitab4.5_0002138g0110 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.4e-10 70.1 90 48.9
Nitab4.5_0002337g0120 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.4e-10 70.1 73 54.8
Nitab4.5_0000774g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 2.8e-08 62.4 56 57.1
PGSC0003DMG400034321 Solanum tuberosum HOM05D028689 ORTHO05D026163 4.9e-08 61.6 121 37.2
Nitab4.5_0001306g0020 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.1e-07 60.5 57 57.9
PGSC0003DMG400004245 Solanum tuberosum HOM05D028689 ORTHO05D026163 7.0e-07 57.8 120 39.2
Nitab4.5_0001964g0030 Nicotiana tabacum HOM05D008313 ORTHO05D002376 1.2e-06 57.0 43 69.8
PGSC0003DMG400024196 Solanum tuberosum HOM05D028689 ORTHO05D026163 3.5e-06 55.5 122 37.7


User provided reference genes

Program Settings