Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 3.3e-86 321.6 157 100.0
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 9.6e-70 266.9 143 93.7
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 2.3e-39 166.0 130 64.6
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 2.0e-38 162.9 141 61.7
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 2.6e-38 162.5 130 66.2
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 2.8e-37 159.1 142 59.9
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 1.6e-35 153.3 142 60.6
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 2.0e-35 152.9 142 60.6
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 2.0e-35 152.9 142 60.6
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 1.0e-34 150.6 144 56.9
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 1.9e-33 146.4 118 65.3
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 1.8e-31 139.8 144 55.6
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 1.8e-31 139.8 150 52.0
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 6.7e-31 137.9 137 59.1
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 1.5e-30 136.7 131 58.0
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 2.6e-30 136.0 145 53.1
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 4.4e-30 135.2 154 51.3
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 1.7e-29 133.3 145 55.2
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 2.2e-29 132.9 139 51.8
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 4.8e-29 131.7 142 52.1
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 1.4e-28 130.2 150 50.0
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 1.8e-28 129.8 146 56.2
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 2.4e-28 129.4 131 50.4
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 2.4e-28 129.4 142 52.1
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 3.1e-28 129.0 142 53.5
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 4.1e-28 128.6 139 52.5
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 9.1e-28 127.5 139 51.1
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 1.6e-27 126.7 141 53.9
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 3.5e-27 125.6 138 51.4
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 3.5e-27 125.6 138 51.4
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 3.5e-27 125.6 154 50.0
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 4.5e-27 125.2 146 51.4
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 3.8e-26 122.1 135 50.4
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 8.5e-26 120.9 139 48.2
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 1.1e-25 120.6 137 49.6
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 1.5e-25 120.2 129 51.9
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 5.5e-25 118.2 144 50.0
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 5.5e-25 118.2 147 51.7
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 5.5e-25 118.2 140 50.0
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 7.2e-25 117.9 130 51.5
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 7.2e-25 117.9 149 51.0
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 9.4e-25 117.5 144 50.0
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 1.6e-24 116.7 143 49.7
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.6e-24 116.7 144 50.0
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 2.1e-24 116.3 137 54.0
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 2.1e-24 116.3 144 50.0
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 2.1e-24 116.3 142 50.7
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 2.1e-24 116.3 137 50.4
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 2.7e-24 115.9 122 53.3
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 3.6e-24 115.5 134 50.7
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 6.1e-24 114.8 139 49.6
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 8.0e-24 114.4 137 50.4
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 8.0e-24 114.4 144 49.3
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 8.0e-24 114.4 154 46.1
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 1.0e-23 114.0 150 44.0
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 1.4e-23 113.6 149 49.0
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.8e-23 113.2 160 47.5
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 1.8e-23 113.2 160 47.5
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 1.8e-23 113.2 141 48.9
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 2.3e-23 112.8 150 44.0
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 3.0e-23 112.5 118 58.5
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 3.0e-23 112.5 113 53.1
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 4.0e-23 112.1 101 59.4
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 4.0e-23 112.1 150 48.7
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 1.2e-22 110.5 129 48.8
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 1.5e-22 110.2 136 50.0
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 2.0e-22 109.8 112 53.6
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 2.6e-22 109.4 140 52.1
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 5.7e-22 108.2 157 42.7
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 9.8e-22 107.5 150 44.7
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 1.3e-21 107.1 134 47.0
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 1.3e-21 107.1 134 47.0
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 1.7e-21 106.7 103 54.4
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 6.3e-21 104.8 126 50.0
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 8.3e-21 104.4 143 49.7
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 1.1e-20 104.0 127 48.8
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 1.6e-19 100.1 134 45.5
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 3.5e-19 99.0 145 46.2
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 1.3e-18 97.1 139 47.5
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 5.0e-18 95.1 171 41.5
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 5.0e-18 95.1 131 46.6
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 5.0e-18 95.1 123 45.5
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 2.5e-17 92.8 100 51.0
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 6.1e-16 88.2 134 43.3
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 1.4e-15 87.0 123 45.5
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 2.3e-15 86.3 129 41.9
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 3.0e-15 85.9 123 45.5
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 4.0e-15 85.5 143 42.0
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 8.9e-15 84.3 142 43.0
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 8.9e-15 84.3 77 53.2
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 8.9e-15 84.3 95 50.5
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 1.5e-14 83.6 123 45.5
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 2.0e-14 83.2 153 39.9
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 2.6e-14 82.8 133 44.4
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 4.4e-14 82.0 152 43.4
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 7.5e-14 81.3 152 42.1
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 7.5e-14 81.3 152 42.1
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 9.8e-14 80.9 77 55.8
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 1.3e-13 80.5 142 40.8
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 2.8e-13 79.3 140 42.1
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 3.1e-12 75.9 137 43.1
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 9.2e-12 74.3 144 41.0
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 1.6e-11 73.6 121 40.5
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 2.0e-11 73.2 93 46.2
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 7.8e-11 71.2 139 41.0
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 3.8e-10 68.9 124 39.5
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 1.9e-09 66.6 173 33.5
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 9.5e-09 64.3 101 41.6
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 2.1e-08 63.2 142 36.6


User provided reference genes

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