Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0640 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-47 192.2 95 100.0
Nitab4.5_0006409g0060 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-14 83.2 60 70.0
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-14 83.2 60 70.0
Peaxi162Scf01018g00211 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-14 83.2 60 70.0
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-14 82.8 44 86.4
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 2.0e-14 82.4 44 84.1
Nitab4.5_0000660g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-14 82.4 45 84.4
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 2.0e-14 82.4 44 84.1
Haze_22013 Corylus avellana HOM05D000001 ORTHO05D000003 2.7e-14 82.0 94 51.1
HanXRQChr09g0251511 Helianthus annuus HOM05D000533 ORTHO05D001069 2.7e-14 82.0 44 86.4
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 2.7e-14 82.0 44 86.4
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 2.7e-14 82.0 44 86.4
Lsat_1_v5_gn_9_49240 Lactuca sativa HOM05D000533 ORTHO05D001069 2.7e-14 82.0 44 86.4
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.7e-14 82.0 60 68.3
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.7e-14 82.0 60 68.3
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.7e-14 82.0 60 68.3
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 3.5e-14 81.6 45 82.2
Nitab4.5_0006502g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.5e-14 81.6 44 86.4
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.5e-14 81.3 44 84.1
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 4.5e-14 81.3 44 84.1
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 4.5e-14 81.3 44 84.1
FAN01G2373 Fragaria x ananassa HOM05D000533 ORTHO05D001069 4.5e-14 81.3 44 84.1
PGSC0003DMG401008783 Solanum tuberosum HOM05D000533 ORTHO05D001069 4.5e-14 81.3 60 66.7
Nn1g08631 Nelumbo nucifera HOM05D000533 ORTHO05D001069 5.9e-14 80.9 44 81.8
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 5.9e-14 80.9 44 81.8
SalBow1G1175 Salvia bowleyana HOM05D000533 ORTHO05D001069 5.9e-14 80.9 43 83.7
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 7.7e-14 80.5 44 81.8
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 7.7e-14 80.5 44 81.8
MELO3C027054.2 Cucumis melo HOM05D000533 ORTHO05D001069 7.7e-14 80.5 44 79.5
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.0e-13 80.1 44 81.8
Nitab4.5_0007400g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-13 79.7 44 84.1
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 1.3e-13 79.7 43 83.7
RhsimPtG0005000 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.3e-13 79.7 44 81.8
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.3e-13 79.7 44 81.8
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.3e-13 79.7 44 81.8
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 1.7e-13 79.3 44 81.8
arahy.Tifrunner.gnm1.ann1.V68ACY Arachis hypogaea HOM05D000533 ORTHO05D001069 1.7e-13 79.3 44 81.8
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 1.7e-13 79.3 44 81.8
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 1.7e-13 79.3 44 81.8
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 1.7e-13 79.3 44 81.8
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 1.7e-13 79.3 43 81.4
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 1.7e-13 79.3 43 81.4
EL10Ac1g02290 Beta vulgaris HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 79.5
EL10Ac6g14289 Beta vulgaris HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 79.5
EL10Ac9g21011 Beta vulgaris HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 79.5
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 81.8
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 81.8
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 81.8
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 2.3e-13 79.0 44 81.8
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.9e-13 78.6 43 81.4
AL9U11960 Arabidopsis lyrata HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolC2t10601H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolSC44t60826H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BolSC45t60905H Brassica oleracea HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BraSC59t46530Z Brassica rapa HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 2.9e-13 78.6 59 62.7
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 2.9e-13 78.6 44 79.5
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 2.9e-13 78.6 44 79.5
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 3.8e-13 78.2 43 76.7
arahy.Tifrunner.gnm1.ann1.G8ZYC2 Arachis hypogaea HOM05D000533 ORTHO05D001069 3.8e-13 78.2 45 77.8
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 3.8e-13 78.2 43 76.7
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Psat3g095040 Pisum sativum HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Psat7g126800 Pisum sativum HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 5.0e-13 77.8 44 79.5
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 6.5e-13 77.4 43 81.4
Solyc10g047400.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.6e-13 77.0 50 70.0
AUR62028573 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.1e-12 76.6 44 77.3
CAN.G30.7 Capsicum annuum HOM05D000533 ORTHO05D001069 1.9e-12 75.9 44 81.8
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 2.5e-12 75.5 60 60.0
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 2.5e-12 75.5 43 74.4
Eucgr.K01620 Eucalyptus grandis HOM05D000533 ORTHO05D001069 3.2e-12 75.1 43 76.7
Psat5g037800 Pisum sativum HOM05D000533 ORTHO05D001069 3.2e-12 75.1 44 77.3
AUR62043262 Chenopodium quinoa HOM05D000533 ORTHO05D001069 5.5e-12 74.3 44 75.0
Psat0s1160g0400 Pisum sativum HOM05D000533 ORTHO05D002807 5.5e-12 74.3 78 55.1
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.2e-12 73.9 44 81.8
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 9.5e-12 73.6 44 72.7
BolSC29t60550H Brassica oleracea HOM05D000533 ORTHO05D001069 1.2e-11 73.2 61 60.7
GSVIVG01012613001 Vitis vinifera HOM05D000533 ORTHO05D001069 1.2e-11 73.2 44 75.0
Gorai.003G071300 Gossypium raimondii HOM05D000533 ORTHO05D001069 1.6e-11 72.8 39 84.6
A08p24980 Brassica napus HOM05D000533 ORTHO05D001069 2.1e-11 72.4 59 59.3
BraA08t34453Z Brassica rapa HOM05D000533 ORTHO05D001069 2.1e-11 72.4 59 59.3
SEGI_11816 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.8e-11 72.0 44 70.5
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.8e-11 72.0 44 70.5
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.8e-11 72.0 44 70.5
SEGI_41539 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.8e-11 72.0 44 70.5
HanXRQChr00c0504g0575321 Helianthus annuus HOM05D000533 ORTHO05D001069 3.6e-11 71.6 40 82.5
Psat0s1920g0160 Pisum sativum HOM05D000533 ORTHO05D001069 1.0e-10 70.1 44 75.0
CAN.G615.5 Capsicum annuum HOM05D000533 ORTHO05D001069 2.3e-10 68.9 37 89.2
Gohir.D09G085250 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.0e-10 68.6 44 72.7
Gorai.006G101200 Gossypium raimondii HOM05D000533 ORTHO05D001069 4.0e-10 68.2 44 70.5
Mapoly0048s0043 Marchantia polymorpha HOM05D000533 ORTHO05D001069 4.0e-10 68.2 43 67.4
BolSC49t61147H Brassica oleracea HOM05D000533 ORTHO05D001069 6.8e-10 67.4 53 62.3
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 2.0e-09 65.9 37 81.1
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 9.8e-09 63.5 35 82.9
MELO3C031837.2 Cucumis melo HOM05D000533 ORTHO05D001069 9.8e-09 63.5 44 65.9
C02p28810 Brassica napus HOM05D000533 ORTHO05D001069 1.3e-08 63.2 40 70.0
arahy.Tifrunner.gnm1.ann1.JUM97N Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-08 62.4 43 72.1
CAN.G127.9 Capsicum annuum HOM05D000533 ORTHO05D001069 4.9e-08 61.2 37 81.1
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.4e-07 59.7 36 77.8
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.8e-07 59.3 41 63.4
Nitab4.5_0001478g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.0e-07 57.4 34 76.5
Eucgr.B00847 Eucalyptus grandis HOM05D000533 ORTHO05D001069 9.2e-07 57.0 43 60.5
Solyc07g032430.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.2e-07 57.0 37 73.0
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 1.2e-06 56.6 30 86.7
ClCG10G006000 Citrullus lanatus HOM05D000533 ORTHO05D001069 2.0e-06 55.8 30 80.0
Hund28343 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.5e-06 54.7 41 65.9
Hund29094 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.5e-06 54.7 41 65.9
Hund30925 Selenicereus undatus HOM05D000533 ORTHO05D001069 4.5e-06 54.7 41 65.9


User provided reference genes

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