Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 6.3e-151 537.3 261 100.0
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.0e-149 532.3 261 98.9
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.3e-143 513.1 261 92.7
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 3.7e-143 511.5 261 93.1
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.4e-142 508.8 261 93.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 5.4e-126 454.5 261 85.8
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.9e-115 419.5 264 73.9
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 7.6e-112 407.5 264 72.3
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 3.2e-110 402.1 264 74.2
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.2e-109 400.2 261 71.6
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.6e-109 399.8 263 71.9
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 7.9e-109 397.5 264 70.5
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.7e-108 396.4 253 71.5
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.3e-108 396.0 261 70.1
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 6.6e-108 394.4 253 70.0
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.1e-107 393.7 264 70.5
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 2.5e-107 392.5 261 72.0
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.3e-107 391.7 253 71.5
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 4.3e-107 391.7 252 74.2
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 2.8e-106 389.0 258 70.5
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 3.6e-106 388.7 264 70.1
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 6.2e-106 387.9 253 70.4
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 6.2e-106 387.9 267 67.4
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 2.4e-105 386.0 262 69.5
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 3.1e-105 385.6 257 72.8
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 2.0e-104 382.9 253 69.2
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 3.4e-104 382.1 254 68.1
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 3.8e-103 378.6 262 67.6
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 4.9e-103 378.3 253 70.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 6.4e-103 377.9 253 69.2
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.4e-102 376.7 264 67.8
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.2e-101 373.6 262 67.6
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 2.7e-101 372.5 261 68.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.0e-100 370.5 262 66.0
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 1.5e-99 366.7 262 64.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 4.3e-99 365.2 305 58.0
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.4e-99 364.4 254 67.3
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 7.4e-99 364.4 263 65.0
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 7.4e-99 364.4 265 66.8
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 9.6e-99 364.0 253 66.0
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.8e-98 361.7 253 67.2
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 6.2e-98 361.3 253 67.2
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.1e-97 360.5 257 66.1
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 3.1e-97 359.0 220 75.5
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 4.0e-97 358.6 262 64.9
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 5.3e-97 358.2 262 63.7
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 9.0e-97 357.5 254 67.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.0e-97 357.5 254 67.7
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 9.0e-97 357.5 262 65.3
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-96 357.1 254 67.3
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 5.8e-96 354.8 255 65.1
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.0e-95 354.0 253 67.2
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.0e-95 354.0 254 64.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.3e-95 353.6 255 66.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.9e-95 352.4 263 63.9
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 3.8e-95 352.1 253 64.8
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 1.4e-94 350.1 260 64.2
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 4.2e-94 348.6 254 63.4
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 3.5e-93 345.5 264 64.0
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 3.9e-92 342.0 261 62.1
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 6.7e-92 341.3 254 63.0
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.9e-91 339.7 254 62.6
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.8e-90 335.1 246 66.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 5.3e-89 331.6 225 68.0
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.7e-87 326.6 265 60.4
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 1.7e-87 326.6 255 61.2
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.6e-85 320.1 255 61.6
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.8e-82 309.3 217 68.7
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.3e-79 300.4 220 60.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 8.5e-79 297.7 253 58.1
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 7.2e-78 294.7 255 56.1
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 4.5e-72 275.4 224 57.1
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.2e-69 267.3 228 56.1
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.2e-69 267.3 179 68.7
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 3.6e-69 265.8 178 69.1
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 5.9e-64 248.4 207 59.9
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 5.9e-64 248.4 207 59.9
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.2e-58 229.9 179 56.4
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.1e-54 217.6 282 45.0
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 3.6e-53 212.6 161 60.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 4.7e-53 212.2 181 57.5
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 8.8e-52 208.0 132 71.2
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 3.2e-46 189.5 121 73.6
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 8.8e-44 181.4 192 47.4
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 7.5e-43 178.3 131 64.1
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 3.8e-39 166.0 157 53.5
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.4e-36 157.5 106 69.8
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.6e-31 138.7 118 56.8
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.2e-29 134.4 106 58.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 3.6e-29 132.9 315 31.4
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.0e-28 131.3 315 31.4
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 7.8e-24 115.2 97 59.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.5e-22 110.9 92 55.4
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.8e-20 104.0 58 74.1
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.0e-20 102.8 58 72.4
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 1.7e-15 87.4 75 53.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.1e-13 80.5 113 40.7


User provided reference genes

Program Settings