Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.5e-46 187.2 89 100.0
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 5.9e-32 140.6 119 63.9
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.5e-30 136.0 116 62.1
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 4.2e-30 134.4 121 58.7
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 5.5e-30 134.0 119 61.3
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.0e-28 129.8 113 61.9
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 5.9e-24 114.0 111 57.7
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 6.1e-21 104.0 118 46.6
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.0e-20 103.2 119 49.6
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.0e-20 101.3 120 45.8
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.3e-18 94.0 90 56.7
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.4e-17 92.0 120 44.2
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 9.1e-17 90.1 103 46.6
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.5e-16 87.8 121 43.0
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-14 82.4 57 64.9
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-14 82.4 118 42.4
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 3.3e-14 81.6 112 43.8
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 9.5e-14 80.1 111 39.6
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 9.5e-14 80.1 110 42.7
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.2e-13 79.7 117 38.5
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.6e-13 79.3 114 39.5
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.6e-13 79.3 112 42.0
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.6e-13 79.3 112 42.0
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.1e-13 79.0 112 42.0
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.8e-13 78.6 111 38.7
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 4.7e-13 77.8 117 38.5
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 8.0e-13 77.0 107 39.3
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 8.0e-13 77.0 116 37.9
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 1.4e-12 76.3 112 38.4
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.8e-12 75.9 118 37.3
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.8e-12 75.9 115 37.4
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.3e-12 75.5 109 40.4
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 2.3e-12 75.5 119 37.0
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 4.0e-12 74.7 116 36.2
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 5.2e-12 74.3 111 37.8
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 6.8e-12 73.9 109 38.5
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.2e-11 73.2 118 36.4
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.5e-11 72.8 115 38.3
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 1.5e-11 72.8 116 35.3
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 2.0e-11 72.4 112 37.5
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.0e-11 72.4 112 35.7
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 2.0e-11 72.4 112 35.7
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.6e-11 72.0 116 36.2
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 4.4e-11 71.2 119 36.1
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 5.7e-11 70.9 110 38.2
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 5.7e-11 70.9 111 36.9
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.7e-11 70.9 112 35.7
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 7.5e-11 70.5 115 37.4
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 7.5e-11 70.5 117 34.2
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.8e-11 70.1 108 36.1
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.3e-10 69.7 108 37.0
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.2e-10 68.9 111 34.2
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.2e-10 68.9 111 34.2
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.2e-10 68.9 111 34.2
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 2.8e-10 68.6 102 36.3
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.7e-10 68.2 115 33.0
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 8.3e-10 67.0 110 35.5
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.1e-09 66.6 111 35.1
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.8e-09 65.9 111 37.8
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.1e-09 65.1 117 32.5
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 3.1e-09 65.1 104 37.5
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.1e-09 64.7 118 31.4
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.4e-09 64.3 106 34.9
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 7.0e-09 63.9 114 34.2
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 7.0e-09 63.9 114 34.2
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 9.2e-09 63.5 117 32.5
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.2e-08 63.2 113 33.6
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-08 63.2 115 34.8
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 2.0e-08 62.4 108 37.0
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.7e-08 62.0 111 34.2
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.5e-08 61.2 114 34.2
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 5.9e-08 60.8 110 31.8
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 5.9e-08 60.8 110 36.4
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.0e-07 60.1 110 35.5
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 1.7e-07 59.3 115 31.3
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 2.3e-07 58.9 110 33.6
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 2.3e-07 58.9 105 35.2
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.3e-07 58.9 109 31.2
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.9e-07 58.5 111 33.3
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 3.9e-07 58.2 109 30.3
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 3.9e-07 58.2 107 34.6
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.6e-07 57.4 81 39.5
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 8.6e-07 57.0 111 31.5
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.1e-06 56.6 107 33.6
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.1e-06 56.6 102 32.4
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 1.5e-06 56.2 94 39.4
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.5e-06 55.5 102 31.4
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 3.3e-06 55.1 101 31.7
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 4.3e-06 54.7 110 30.0
Medtr6g055960 Medicago truncatula HOM05D000022 ORTHO05D010537 7.3e-06 53.9 71 42.3
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.5e-06 53.5 104 30.8


User provided reference genes

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