Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.8e-166 589.3 333 100.0
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.8e-158 562.8 333 94.9
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.2e-116 422.9 349 70.2
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.8e-113 413.3 333 73.9
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 3.7e-111 405.6 333 72.7
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 8.2e-111 404.4 333 72.4
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 4.4e-80 302.4 370 54.1
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 2.0e-77 293.5 350 55.1
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 5.0e-76 288.9 363 52.1
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 4.2e-75 285.8 366 55.5
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 1.8e-73 280.4 356 54.5
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 8.9e-73 278.1 350 52.6
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.5e-72 277.3 350 53.1
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 2.6e-72 276.6 362 52.2
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 1.3e-71 274.2 369 50.7
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 2.8e-71 273.1 350 51.7
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 4.9e-71 272.3 358 50.8
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 6.3e-71 271.9 346 53.8
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 1.1e-70 271.2 376 50.5
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.4e-70 270.8 374 49.5
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 3.2e-70 269.6 353 55.2
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.7e-69 266.5 360 49.4
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 5.9e-69 265.4 362 50.6
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 2.9e-68 263.1 378 50.5
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 2.9e-68 263.1 367 51.0
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 8.6e-68 261.5 360 48.6
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.9e-67 260.4 364 49.5
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 9.5e-67 258.1 334 50.9
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.2e-66 257.7 360 50.8
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.6e-66 257.3 359 49.6
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 1.6e-66 257.3 346 51.2
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 2.1e-66 256.9 364 49.7
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 6.1e-66 255.4 366 48.4
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 8.0e-66 255.0 374 47.6
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 8.9e-65 251.5 340 53.8
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 2.6e-64 250.0 364 51.4
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 7.5e-64 248.4 346 52.0
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 2.2e-63 246.9 349 49.9
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 4.9e-63 245.7 349 49.6
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 6.4e-63 245.4 345 48.4
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.4e-63 245.4 360 47.5
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.1e-62 244.6 357 48.7
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.1e-62 244.6 364 46.4
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 1.1e-62 244.6 337 50.4
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.9e-62 243.8 364 49.2
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.9e-62 243.8 344 50.3
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 3.2e-62 243.0 372 47.8
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 7.0e-62 241.9 358 47.8
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 7.0e-62 241.9 355 49.9
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 1.2e-61 241.1 344 49.4
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 1.6e-61 240.7 360 47.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.6e-61 239.2 407 42.8
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 1.7e-60 237.3 340 50.0
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 5.0e-60 235.7 345 53.3
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 1.1e-59 234.6 351 48.1
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.1e-58 230.3 341 48.4
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 6.2e-58 228.8 342 49.1
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.1e-57 228.0 386 45.9
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 1.8e-57 227.3 347 47.6
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 1.8e-57 227.3 347 48.7
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 6.4e-55 218.8 367 43.1
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 8.3e-55 218.4 318 48.1
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 2.7e-53 213.4 420 42.1
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 6.6e-52 208.8 368 44.8
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.8e-50 203.4 292 49.0
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 8.1e-50 201.8 454 41.4
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 4.4e-48 196.1 292 47.3
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 8.3e-47 191.8 421 36.8
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 1.4e-46 191.0 364 43.7
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 4.6e-45 186.0 285 47.0
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 6.0e-45 185.7 322 42.9
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 6.6e-44 182.2 402 40.0
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 2.5e-43 180.3 405 41.5
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 8.1e-42 175.3 358 40.2
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.1e-41 174.9 358 42.7
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.1e-41 174.9 358 42.7
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 1.8e-41 174.1 368 40.5
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 2.4e-41 173.7 358 42.2
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.2e-40 171.4 358 40.2
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 2.0e-40 170.6 283 43.5
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 5.8e-40 169.1 352 40.6
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 1.7e-39 167.5 366 39.6
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 3.8e-39 166.4 367 40.3
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 3.8e-39 166.4 367 40.3
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.2e-38 163.3 327 41.6
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.2e-37 161.4 277 43.0
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 7.8e-37 158.7 349 39.8
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 3.0e-36 156.8 375 37.6
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 1.9e-35 154.1 358 38.5
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 2.5e-35 153.7 180 55.6
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 7.3e-35 152.1 354 41.2
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 2.8e-34 150.2 356 37.9
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 6.2e-34 149.1 356 37.6
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 9.0e-33 145.2 292 39.7
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 7.6e-32 142.1 341 37.5
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 7.3e-27 125.6 348 34.8
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 2.1e-26 124.0 344 32.8
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.6e-26 123.2 304 38.5
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 6.2e-26 122.5 346 32.9
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 2.0e-24 117.5 383 33.7
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 3.4e-24 116.7 314 36.6
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 8.4e-23 112.1 334 33.8
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 5.4e-22 109.4 276 38.4
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 1.8e-17 94.4 298 33.9
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-14 83.6 47 78.7
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-14 83.6 47 78.7
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.3e-14 82.0 47 76.6
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 9.3e-14 82.0 47 78.7
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 4.6e-13 79.7 131 40.5
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.0e-12 78.6 47 74.5
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 1.8e-12 77.8 203 31.0
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.3e-12 77.4 47 74.5
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.7e-12 75.9 154 37.7
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 47 72.3
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.5e-11 74.7 134 36.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.5e-11 74.7 134 36.6
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 1.9e-11 74.3 99 45.5
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 7.4e-11 72.4 104 45.2
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 1.4e-09 68.2 151 35.1
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 5.3e-09 66.2 49 61.2
Cpa.g.sc939.1 Carica papaya HOM05D006327 ORTHO05D007952 5.3e-09 66.2 58 65.5
SMO361G0449 Selaginella moellendorffii HOM05D063101 ORTHO05D007952 2.6e-08 63.9 206 33.0
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 9.3e-06 55.5 66 47.0


User provided reference genes

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