Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000003g0090 Nicotiana tabacum HOM05D004889 ORTHO05D005478 2.2e-28 129.0 112 100.0
Nitab4.5_0003744g0040 Nicotiana tabacum HOM05D004889 ORTHO05D005478 1.1e-24 116.7 110 64.5
CAN.G628.53 Capsicum annuum HOM05D004889 ORTHO05D005478 1.8e-22 109.4 110 66.4
PGSC0003DMG400033066 Solanum tuberosum HOM05D004889 ORTHO05D005478 2.4e-22 109.0 110 59.1
Solyc06g071140.3 Solanum lycopersicum HOM05D004889 ORTHO05D005478 3.6e-18 95.1 110 62.7
Peaxi162Scf00496g00012 Petunia axillaris HOM05D004889 ORTHO05D005478 4.7e-18 94.7 110 78.2
Sopen06g027440 Solanum pennellii HOM05D004889 ORTHO05D005478 1.8e-17 92.8 110 64.5
Dinv38643 Davidia involucrata HOM05D004889 ORTHO05D005478 5.2e-17 91.3 115 59.1
CsaV3_1G008010 Cucumis sativus L. HOM05D004889 ORTHO05D005478 1.5e-16 89.7 114 57.9
Sed0005054 Sechium edule HOM05D004889 ORTHO05D005478 2.6e-16 89.0 114 64.9
Medtr4g107420 Medicago truncatula HOM05D004889 ORTHO05D005478 2.2e-15 85.9 117 57.3
Potri.015G090200 Populus trichocarpa HOM05D004889 ORTHO05D005478 2.2e-15 85.9 115 54.8
TAR039G0004 Trochodendron aralioides HOM05D004889 ORTHO05D005478 4.8e-15 84.7 115 60.0
TAR629G1437 Trochodendron aralioides HOM05D004889 ORTHO05D005478 4.8e-15 84.7 115 60.0
MELO3C002218.2 Cucumis melo HOM05D004889 ORTHO05D005478 8.2e-15 84.0 114 50.9
CiPaw.11G036000 Carya illinoinensis HOM05D004889 ORTHO05D005478 1.1e-14 83.6 117 54.7
Sc12g0006090 Simmondsia chinensis HOM05D004889 ORTHO05D005478 1.4e-14 83.2 113 50.4
Ca_21861_v3 Cicer arietinum L. HOM05D004889 ORTHO05D005478 1.8e-14 82.8 116 58.6
Medtr4g107410 Medicago truncatula HOM05D004889 ORTHO05D005478 3.1e-14 82.0 116 59.5
Sabra12G0067700 Salix brachista HOM05D004889 ORTHO05D005478 4.1e-14 81.6 114 49.1
TWI60G0433 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 4.1e-14 81.6 111 58.6
Thecc.03G076300 Theobroma cacao HOM05D004889 ORTHO05D005478 7.0e-14 80.9 116 57.8
TAR640G0002 Trochodendron aralioides HOM05D004889 ORTHO05D005478 7.0e-14 80.9 115 56.5
ClCG01G014310 Citrullus lanatus HOM05D004889 ORTHO05D005478 9.1e-14 80.5 114 50.9
GSVIVG01008085001 Vitis vinifera HOM05D004889 ORTHO05D005478 1.2e-13 80.1 113 55.8
Rhsim12G0159900 Rhododendron simsii HOM05D004889 ORTHO05D005478 1.6e-13 79.7 111 68.5
Psat4g054400 Pisum sativum HOM05D004889 ORTHO05D005478 2.0e-13 79.3 116 60.3
Haze_07757 Corylus avellana HOM05D004889 ORTHO05D005478 3.5e-13 78.6 116 55.2
vmacro16573 Vaccinium macrocarpon HOM05D004889 ORTHO05D005478 3.5e-13 78.6 112 58.0
TWI81G0893 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 4.5e-13 78.2 111 58.6
MD14G1191200 Malus domestica HOM05D004889 ORTHO05D005478 5.9e-13 77.8 116 56.9
MSTRG.23064 Avicennia marina HOM05D004889 ORTHO05D005478 7.7e-13 77.4 117 53.0
Hma1.2p1_0104F.1_g050430 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 7.7e-13 77.4 111 61.3
Sed0007285 Sechium edule HOM05D004889 ORTHO05D005478 7.7e-13 77.4 114 61.4
DCAR_016527 Daucus carota HOM05D004889 ORTHO05D005478 1.0e-12 77.0 111 64.9
AUR62031228 Chenopodium quinoa HOM05D004889 ORTHO05D005478 1.3e-12 76.6 114 54.4
Nn4g22998 Nelumbo nucifera HOM05D004889 ORTHO05D005478 1.7e-12 76.3 115 54.8
AUR62027699 Chenopodium quinoa HOM05D004889 ORTHO05D005478 2.9e-12 75.5 114 54.4
CSS0046467 Camellia sinensis var. sinensis HOM05D004889 ORTHO05D005478 5.0e-12 74.7 115 57.4
Hma1.2p1_3047F.1_g332100 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 5.0e-12 74.7 111 57.7
Hma1.2p1_3047F.1_g332110 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 5.0e-12 74.7 111 57.7
CANSAT80G0562 Cannabis sativa HOM05D004889 ORTHO05D005478 6.5e-12 74.3 117 54.7
QL03p038490 Quercus lobata HOM05D004889 ORTHO05D005478 6.5e-12 74.3 117 59.0
Manes.14G073400 Manihot esculenta HOM05D004889 ORTHO05D005478 8.5e-12 73.9 119 51.3
SalBow5G2608 Salvia bowleyana HOM05D004889 ORTHO05D005478 1.5e-11 73.2 114 57.0
MD06G1185300 Malus domestica HOM05D004889 ORTHO05D005478 2.5e-11 72.4 116 56.0
RcHm_v2.0_Chr7g0180311 Rosa chinensis HOM05D004889 ORTHO05D005478 2.5e-11 72.4 117 55.6
MBI04_g18038_MAGBIO Magnolia biondii HOM05D004889 ORTHO05D005478 3.2e-11 72.0 120 61.7
FAN13G0367 Fragaria x ananassa HOM05D004889 ORTHO05D005478 4.2e-11 71.6 117 47.0
Lj5A118T73 Lonicera japonica HOM05D004889 ORTHO05D005478 4.2e-11 71.6 113 62.8
Potri.012G093000 Populus trichocarpa HOM05D004889 ORTHO05D005478 4.2e-11 71.6 116 54.3
Migut.I00111 Erythranthe guttata HOM05D004889 ORTHO05D005478 9.4e-11 70.5 115 48.7
ATR0712G167 Amborella trichopoda HOM05D004889 ORTHO05D005478 1.2e-10 70.1 119 53.8
FAN08G0221 Fragaria x ananassa HOM05D002295 ORTHO05D002789 1.2e-10 70.1 117 52.1
PSO161G0045 Papaver somniferum HOM05D004889 ORTHO05D005478 1.6e-10 69.7 116 56.0
Sabra15G0112400 Salix brachista HOM05D004889 ORTHO05D005478 1.6e-10 69.7 113 58.4
Cpa.g.sc17.179 Carica papaya HOM05D004889 ORTHO05D005478 2.1e-10 69.3 119 63.9
Manes.06G097700 Manihot esculenta HOM05D004889 ORTHO05D005478 2.7e-10 68.9 115 53.9
Dinv19901 Davidia involucrata HOM05D004889 ORTHO05D005478 3.6e-10 68.6 111 73.9
EL10Ac8g20579 Beta vulgaris HOM05D004889 ORTHO05D005478 6.1e-10 67.8 114 61.4
Duzib084G1322 Durio zibethinus HOM05D004889 ORTHO05D005478 6.1e-10 67.8 116 49.1
Duzib068G1437 Durio zibethinus HOM05D004889 ORTHO05D005478 8.0e-10 67.4 115 40.0
Prupe.5G184200 Prunus persica HOM05D004889 ORTHO05D005478 1.0e-09 67.0 117 61.5
TAR622G0909 Trochodendron aralioides HOM05D004889 ORTHO05D005478 1.0e-09 67.0 113 72.6
COL.COLO4_33419 Corchorus olitorius HOM05D004889 ORTHO05D005478 1.4e-09 66.6 116 63.8
Ciclev10019625m.g Citrus clementina HOM05D004889 ORTHO05D005478 2.3e-09 65.9 119 37.8
Lalb_Chr13g0298111 Lupinus albus HOM05D004889 ORTHO05D005478 4.0e-09 65.1 112 59.8
Duzib205G1395 Durio zibethinus HOM05D004889 ORTHO05D005478 5.2e-09 64.7 116 60.3
Ah.09g233410 Amaranthus hybridus HOM05D004889 ORTHO05D005478 6.8e-09 64.3 114 62.3
Glyma.05G031100 Glycine max HOM05D004889 ORTHO05D005478 8.8e-09 63.9 118 52.5
Lj4g0007492 Lotus japonicus HOM05D004889 ORTHO05D005478 1.2e-08 63.5 120 67.5
FAN18G0072 Fragaria x ananassa HOM05D002295 ORTHO05D002789 1.5e-08 63.2 117 53.8
FvH4_5g15820 Fragaria vesca HOM05D004889 ORTHO05D005478 2.0e-08 62.8 117 53.8
Glyma.17G095700 Glycine max HOM05D004889 ORTHO05D005478 2.0e-08 62.8 120 60.0
Sp2g25820 Schrenkiella parvula HOM05D004889 ORTHO05D005478 2.0e-08 62.8 106 51.9
Hund21165 Selenicereus undatus HOM05D004889 ORTHO05D005478 2.0e-08 62.8 115 68.7
Actinidia04935 Actinidia chinensis HOM05D004889 ORTHO05D005478 2.6e-08 62.4 116 62.9
Oeu022609.1 Olea europaea HOM05D004889 ORTHO05D005478 3.4e-08 62.0 111 68.5
Atru.chr9.2345 Acer truncatum HOM05D004889 ORTHO05D005478 4.4e-08 61.6 110 47.3
Nitab4.5_0000026g0250 Nicotiana tabacum HOM05D004889 ORTHO05D005478 4.4e-08 61.6 110 72.7
Nitab4.5_0003595g0020 Nicotiana tabacum HOM05D004889 ORTHO05D005478 4.4e-08 61.6 110 68.2
Phvul.003G194500 Phaseolus vulgaris HOM05D004889 ORTHO05D005478 4.4e-08 61.6 119 61.3
CARHR156590 Cardamine hirsuta HOM05D004889 ORTHO05D005478 5.7e-08 61.2 113 46.9
Thhalv10003972m.g Eutrema salsugineum HOM05D004889 ORTHO05D005478 5.7e-08 61.2 110 50.0
Gorai.001G074100 Gossypium raimondii HOM05D004889 ORTHO05D005478 9.8e-08 60.5 116 46.6
CARHR276450 Cardamine hirsuta HOM05D004889 ORTHO05D005478 1.7e-07 59.7 109 50.5
PSO478G3716 Papaver somniferum HOM05D004889 ORTHO05D005478 1.7e-07 59.7 128 52.3
THA.LOC104818246 Tarenaya hassleriana HOM05D004889 ORTHO05D005478 1.7e-07 59.7 119 61.3
Gohir.D07G070200 Gossypium hirsutum HOM05D004889 ORTHO05D005478 2.8e-07 58.9 116 45.7
BolC3t18668H Brassica oleracea HOM05D004889 ORTHO05D005478 1.1e-06 57.0 106 51.9
Eucgr.B00394 Eucalyptus grandis HOM05D004889 ORTHO05D005478 1.1e-06 57.0 117 51.3
Lalb_Chr07g0182371 Lupinus albus HOM05D004889 ORTHO05D005478 1.1e-06 57.0 115 60.0
Aa31LG4G16530 Aethionema arabicum HOM05D004889 ORTHO05D005478 1.4e-06 56.6 106 58.5
Aqoxy3G00822 Aquilegia oxysepala HOM05D004889 ORTHO05D005478 1.4e-06 56.6 115 70.4
CDE01G0549 Ceratophyllum demersum HOM05D004889 ORTHO05D005478 1.8e-06 56.2 119 52.9
HanXRQChr09g0271391 Helianthus annuus HOM05D004889 ORTHO05D005478 2.4e-06 55.8 41 68.3
Actinidia37671 Actinidia chinensis HOM05D004889 ORTHO05D005478 3.1e-06 55.5 42 71.4
ECA232G4768 Erigeron canadensis HOM05D000153 ORTHO05D000118 4.1e-06 55.1 37 73.0
TPR.G38450 Trifolium pratense HOM05D004889 ORTHO05D005478 4.1e-06 55.1 44 65.9
HanXRQChr12g0361591 Helianthus annuus HOM05D004889 ORTHO05D005478 7.0e-06 54.3 37 73.0
HPP92_012530 Vanilla planifolia HOM05D004889 ORTHO05D005478 7.0e-06 54.3 42 69.0
HPP92_012535 Vanilla planifolia HOM05D004889 ORTHO05D005478 9.1e-06 53.9 42 66.7


User provided reference genes

Program Settings