Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000002g0480 Nicotiana tabacum HOM05D001454 ORTHO05D006296 2.0e-39 165.2 80 100.0
Nitab4.5_0000065g0190 Nicotiana tabacum HOM05D001454 ORTHO05D006296 4.5e-23 110.9 66 77.3
Nitab4.5_0000957g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.3e-22 109.4 66 75.8
Nitab4.5_0000530g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.5e-21 105.1 66 72.7
Nitab4.5_0000034g0120 Nicotiana tabacum HOM05D001454 ORTHO05D001389 3.2e-21 104.8 64 76.6
Nitab4.5_0004348g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.5e-21 104.0 69 68.1
Nitab4.5_0000413g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-19 99.4 66 66.7
Nitab4.5_0000661g0060 Nicotiana tabacum HOM05D001454 ORTHO05D006296 8.8e-19 96.7 66 65.2
Nitab4.5_0000261g0170 Nicotiana tabacum HOM05D001454 ORTHO05D006296 7.4e-18 93.6 66 62.1
Nitab4.5_0002643g0050 Nicotiana tabacum HOM05D001454 ORTHO05D006296 2.2e-17 92.0 66 65.2
Nitab4.5_0000218g0090 Nicotiana tabacum HOM05D001454 ORTHO05D006296 3.7e-17 91.3 59 67.8
PGSC0003DMG400011858 Solanum tuberosum HOM05D000024 ORTHO05D000006 7.0e-16 87.0 64 56.2
Nitab4.5_0000153g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.1e-16 86.7 63 57.1
Nitab4.5_0000261g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-15 86.3 74 56.8
Nitab4.5_0000314g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.6e-15 85.1 55 72.7
Nitab4.5_0000049g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.0e-14 80.9 51 76.5
Nitab4.5_0004145g0140 Nicotiana tabacum HOM05D001454 ORTHO05D006296 5.5e-13 77.4 66 53.0
Nitab4.5_0000225g0050 Nicotiana tabacum HOM05D001454 ORTHO05D006296 4.7e-12 74.3 50 66.0
Peaxi162Scf00221g00513 Petunia axillaris HOM05D001454 ORTHO05D006296 1.0e-11 73.2 64 56.2
Nitab4.5_0000175g0180 Nicotiana tabacum HOM05D001454 ORTHO05D000006 1.1e-10 69.7 51 60.8
Nitab4.5_0000061g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.7e-10 67.4 44 68.2
Nitab4.5_0000065g0120 Nicotiana tabacum HOM05D000801 ORTHO05D006296 5.7e-10 67.4 42 69.0
Peaxi162Scf00022g00047 Petunia axillaris HOM05D001426 ORTHO05D008832 7.5e-10 67.0 44 65.9
Nitab4.5_0000899g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.3e-09 63.9 52 55.8
Nitab4.5_0000819g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-08 63.2 66 51.5
Peaxi162Scf00181g00073 Petunia axillaris HOM05D000024 ORTHO05D000006 3.1e-08 61.6 64 42.2
Nitab4.5_0000740g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.1e-08 61.2 36 72.2
Nitab4.5_0000001g0470 Nicotiana tabacum HOM05D001454 ORTHO05D006296 2.0e-07 58.9 39 71.8
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-07 58.9 60 48.3
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-07 58.9 60 48.3
PGSC0003DMG400025586 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.7e-07 58.5 66 42.4
Nitab4.5_0000026g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-06 55.8 33 63.6
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-06 55.1 74 37.8


User provided reference genes

Program Settings