Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 3.7e-202 708.0 360 100.0
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.9e-193 679.1 360 96.7
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 8.1e-173 610.5 359 86.6
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.6e-168 596.3 360 85.6
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 2.1e-165 585.9 360 84.2
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 5.7e-158 561.2 318 89.6
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 5.0e-154 548.1 360 80.8
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.1e-140 502.3 362 69.9
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 3.2e-137 492.3 364 71.4
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 3.6e-136 488.8 363 69.7
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 3.6e-136 488.8 368 69.8
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.0e-136 487.6 352 70.2
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 2.3e-135 486.1 360 70.6
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.1e-134 483.8 322 75.8
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 4.4e-134 481.9 357 70.3
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 4.4e-134 481.9 346 70.5
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 9.7e-134 480.7 362 68.2
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 2.8e-133 479.2 309 75.7
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.1e-132 477.2 346 72.0
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 1.8e-132 476.5 345 71.6
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 3.1e-132 475.7 368 66.8
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 7.0e-132 474.6 317 75.4
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 9.1e-132 474.2 370 67.3
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 9.1e-132 474.2 314 75.2
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 4.5e-131 471.9 345 70.4
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.0e-130 470.7 320 75.9
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 1.3e-130 470.3 368 67.1
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 2.9e-130 469.2 313 74.1
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 3.8e-130 468.8 355 67.6
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 6.5e-130 468.0 353 68.8
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 8.5e-130 467.6 348 69.3
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 1.1e-129 467.2 312 74.0
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 1.1e-129 467.2 315 75.6
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 1.9e-129 466.5 344 68.6
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.5e-129 466.1 351 66.7
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 4.2e-129 465.3 342 68.7
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 4.2e-129 465.3 311 74.6
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 7.2e-129 464.5 373 65.1
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.2e-128 463.8 338 69.2
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 3.0e-127 459.1 313 72.5
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.2e-126 457.2 307 73.3
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.0e-126 456.4 314 73.9
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 2.6e-126 456.1 340 68.8
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 9.8e-126 454.1 364 64.8
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.3e-125 453.8 343 68.5
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.3e-125 453.8 311 73.0
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.7e-125 453.4 360 64.4
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 3.7e-125 452.2 332 69.6
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 4.8e-125 451.8 322 69.9
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 8.3e-125 451.1 300 75.7
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 1.1e-124 450.7 358 66.2
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.4e-124 450.3 312 71.5
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.8e-124 449.9 357 66.7
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 1.8e-124 449.9 339 68.4
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.8e-124 449.9 313 70.9
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 5.4e-124 448.4 307 73.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.2e-123 447.2 347 64.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.6e-123 446.8 370 62.7
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 2.7e-123 446.0 353 64.0
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 5.9e-123 444.9 377 63.1
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 7.7e-123 444.5 352 64.8
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 1.3e-122 443.7 357 66.4
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 1.7e-122 443.4 312 71.2
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 2.2e-122 443.0 307 73.0
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 5.0e-122 441.8 297 75.1
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 8.5e-122 441.0 316 69.0
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 8.5e-122 441.0 316 69.0
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 2.5e-121 439.5 284 76.4
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 4.2e-121 438.7 338 65.4
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.1e-120 436.4 316 70.3
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 4.7e-120 435.3 326 68.4
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 1.4e-119 433.7 327 68.2
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.4e-119 433.7 313 69.0
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 5.2e-119 431.8 343 66.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 6.8e-119 431.4 310 68.7
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 8.8e-119 431.0 320 67.2
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 3.4e-118 429.1 313 68.1
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 3.4e-118 429.1 310 68.4
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 3.4e-118 429.1 313 68.1
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 9.8e-118 427.6 326 65.6
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.7e-117 426.8 324 67.0
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 2.8e-117 426.0 326 66.6
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 2.8e-117 426.0 360 63.1
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 3.1e-116 422.5 410 56.1
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 4.1e-116 422.2 334 64.4
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 3.3e-113 412.5 308 67.5
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 4.2e-113 412.1 360 60.3
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 4.7e-112 408.7 272 72.8
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 2.3e-111 406.4 309 67.0
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 4.4e-110 402.1 272 72.4
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 3.7e-109 399.1 279 71.3
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.3e-101 374.0 277 69.3
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 5.0e-98 362.1 278 66.2
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 6.6e-98 361.7 317 55.8
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.9e-92 343.6 306 53.9
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 6.0e-91 338.6 310 55.8
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 7.8e-91 338.2 263 63.1
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.3e-89 332.8 318 53.1
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.7e-82 310.5 281 55.5
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.4e-79 300.8 323 49.8
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.2e-70 271.2 372 48.9
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 6.4e-69 265.4 184 69.6
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.1e-68 264.6 181 74.0
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 3.3e-65 253.1 214 63.6
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.3e-65 251.9 385 39.2
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.3e-65 251.9 385 39.2
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 5.8e-62 242.3 327 43.7
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.3e-61 241.1 381 37.3
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 1.2e-59 234.6 141 83.0
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.7e-56 223.0 219 53.9
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 2.0e-54 217.2 236 51.3
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.7e-51 206.8 495 29.7
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.2e-44 183.0 194 55.2
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 4.6e-43 179.5 149 59.7
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 3.3e-41 173.3 315 36.2
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 7.7e-38 162.2 136 58.8
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 9.1e-23 112.1 61 85.2
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 1.8e-18 97.8 71 66.2
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.2e-14 85.1 150 35.3
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.5e-14 83.2 145 36.6
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.1e-12 78.6 144 34.7
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 4.7e-11 73.2 91 48.4
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.0e-10 70.5 140 32.1


User provided reference genes

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