Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000002g0210 Nicotiana tabacum HOM05D000587 ORTHO05D001561 2.4e-27 124.8 64 100.0
Nitab4.5_0000002g0290 Nicotiana tabacum HOM05D000587 ORTHO05D001561 3.3e-24 114.4 63 96.8
Nitab4.5_0002759g0120 Nicotiana tabacum HOM05D000587 ORTHO05D001561 9.2e-19 96.3 60 78.3
Oeu011378.1 Olea europaea HOM05D000587 ORTHO05D001561 5.0e-17 90.5 65 69.2
Duzib168G2334 Durio zibethinus HOM05D000587 ORTHO05D001561 1.1e-16 89.4 64 67.2
SGA_v2.0_scaffold20G09291 Striga asiatica HOM05D000587 ORTHO05D001561 1.1e-16 89.4 64 67.2
TWI79G1562 Tripterygium wilfordii HOM05D000587 ORTHO05D001561 1.9e-16 88.6 64 68.8
PGSC0003DMG400030466 Solanum tuberosum HOM05D000587 ORTHO05D001561 2.5e-16 88.2 60 71.7
TAR369G1046 Trochodendron aralioides HOM05D000587 ORTHO05D001561 2.5e-16 88.2 64 67.2
Sopen06g033880 Solanum pennellii HOM05D000587 ORTHO05D001561 5.6e-16 87.0 60 70.0
Cpa.g.sc2.302 Carica papaya HOM05D000587 ORTHO05D001561 7.3e-16 86.7 64 65.6
SGA_v2.0_scaffold54G19464 Striga asiatica HOM05D000587 ORTHO05D001561 7.3e-16 86.7 64 67.2
SalBow1G1582 Salvia bowleyana HOM05D000587 ORTHO05D001561 9.5e-16 86.3 64 67.2
Actinidia34491 Actinidia chinensis HOM05D000587 ORTHO05D001561 1.2e-15 85.9 64 67.2
Cc01_g15260 Coffea canephora HOM05D000587 ORTHO05D001561 1.2e-15 85.9 64 68.8
Nn5g26866 Nelumbo nucifera HOM05D000587 ORTHO05D001561 1.2e-15 85.9 64 65.6
Peaxi162Scf00390g00330 Petunia axillaris HOM05D000587 ORTHO05D001561 1.2e-15 85.9 61 73.8
Solyc06g082500.3 Solanum lycopersicum HOM05D000587 ORTHO05D001561 1.6e-15 85.5 60 68.3
COL.COLO4_11205 Corchorus olitorius HOM05D000587 ORTHO05D001561 2.1e-15 85.1 65 64.6
Rhsim01G0242700 Rhododendron simsii HOM05D000587 ORTHO05D001561 2.1e-15 85.1 64 65.6
Sed0017111 Sechium edule HOM05D000587 ORTHO05D001561 2.1e-15 85.1 65 70.8
CiPaw.14G051100 Carya illinoinensis HOM05D000587 ORTHO05D001561 2.8e-15 84.7 64 68.8
Dinv12275 Davidia involucrata HOM05D000587 ORTHO05D001561 3.6e-15 84.3 64 62.5
Nn2g10328 Nelumbo nucifera HOM05D000587 ORTHO05D001561 3.6e-15 84.3 64 62.5
GSVIVG01024574001 Vitis vinifera HOM05D000587 ORTHO05D001561 3.6e-15 84.3 64 62.5
Eucgr.B04024 Eucalyptus grandis HOM05D000587 ORTHO05D001561 4.7e-15 84.0 64 62.5
Manes.02G210700 Manihot esculenta HOM05D000587 ORTHO05D001561 4.7e-15 84.0 64 62.5
Aa31LG1G7960 Aethionema arabicum HOM05D000587 ORTHO05D001561 8.0e-15 83.2 64 65.6
Migut.D00822 Erythranthe guttata HOM05D000587 ORTHO05D001561 8.0e-15 83.2 64 64.1
CSS0046776 Camellia sinensis var. sinensis HOM05D000587 ORTHO05D001561 1.4e-14 82.4 64 60.9
Duzib170G1076 Durio zibethinus HOM05D000587 ORTHO05D001561 1.4e-14 82.4 65 63.1
QL01p025019 Quercus lobata HOM05D000587 ORTHO05D001561 1.4e-14 82.4 63 65.1
vmacro14638 Vaccinium macrocarpon HOM05D000587 ORTHO05D001561 1.4e-14 82.4 64 62.5
ATR1127G236 Amborella trichopoda HOM05D000587 ORTHO05D001561 3.1e-14 81.3 64 62.5
MSTRG.12707 Avicennia marina HOM05D000587 ORTHO05D001561 3.1e-14 81.3 65 64.6
Thhalv10016866m.g Eutrema salsugineum HOM05D000587 ORTHO05D001561 3.1e-14 81.3 62 62.9
PGR102G0311 Punica granatum HOM05D000587 ORTHO05D001561 3.1e-14 81.3 64 60.9
CsaV3_1G004750 Cucumis sativus L. HOM05D000587 ORTHO05D001561 4.0e-14 80.9 65 66.2
Hma1.2p1_0119F.1_g056920 Hydrangea macrophylla HOM05D000587 ORTHO05D001561 4.0e-14 80.9 64 64.1
Manes.18G139100 Manihot esculenta HOM05D000587 ORTHO05D001561 4.0e-14 80.9 64 59.4
Cfa001220 Carpinus fangiana HOM05D000587 ORTHO05D001561 8.9e-14 79.7 64 65.6
Haze_17342 Corylus avellana HOM05D000587 ORTHO05D001561 8.9e-14 79.7 64 65.6
Gohir.A08G000044 Gossypium hirsutum HOM05D000587 ORTHO05D001561 8.9e-14 79.7 65 61.5
Gohir.D08G007700 Gossypium hirsutum HOM05D000587 ORTHO05D001561 8.9e-14 79.7 65 61.5
Gorai.004G000900 Gossypium raimondii HOM05D000587 ORTHO05D001561 8.9e-14 79.7 65 61.5
MBI15_g08967_MAGBIO Magnolia biondii HOM05D000587 ORTHO05D001561 8.9e-14 79.7 64 60.9
QL08p064614 Quercus lobata HOM05D000587 ORTHO05D001561 8.9e-14 79.7 63 65.1
TWI31G1235 Tripterygium wilfordii HOM05D000587 ORTHO05D001561 8.9e-14 79.7 64 60.9
AL4G25340 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 1.2e-13 79.3 65 58.5
MELO3C020486.2 Cucumis melo HOM05D000587 ORTHO05D001561 1.2e-13 79.3 65 64.6
Thecc.09G363100 Theobroma cacao HOM05D000587 ORTHO05D001561 1.2e-13 79.3 65 63.1
TAR623G1415 Trochodendron aralioides HOM05D000587 ORTHO05D001561 1.2e-13 79.3 60 63.3
AL1G16910 Arabidopsis lyrata HOM05D000587 ORTHO05D001561 1.5e-13 79.0 69 60.9
Carub.0001s0618 Capsella rubella HOM05D000587 ORTHO05D001561 1.5e-13 79.0 67 59.7
AT1G06890 Arabidopsis thaliana HOM05D000587 ORTHO05D001561 2.0e-13 78.6 69 60.9
ClCG03G000080 Citrullus lanatus HOM05D000587 ORTHO05D001561 2.0e-13 78.6 65 64.6
Dinv28726 Davidia involucrata HOM05D000587 ORTHO05D001561 2.0e-13 78.6 65 63.1
TPR.G16103 Trifolium pratense HOM05D000587 ORTHO05D001561 2.6e-13 78.2 60 60.0
Actinidia23171 Actinidia chinensis HOM05D000587 ORTHO05D001561 3.4e-13 77.8 64 59.4
AT2G30460 Arabidopsis thaliana HOM05D000587 ORTHO05D001561 3.4e-13 77.8 65 58.5
Aqoxy4G02385 Aquilegia oxysepala HOM05D000587 ORTHO05D001561 4.4e-13 77.4 64 56.2
BcaC07g42041 Brassica carinata HOM05D000587 ORTHO05D001561 4.4e-13 77.4 68 58.8
A09p66720 Brassica napus HOM05D000587 ORTHO05D001561 4.4e-13 77.4 68 58.8
C08p50950 Brassica napus HOM05D000587 ORTHO05D001561 4.4e-13 77.4 68 58.8
BolC8t52623H Brassica oleracea HOM05D000587 ORTHO05D001561 4.4e-13 77.4 68 58.8
BraA08t35493Z Brassica rapa HOM05D000587 ORTHO05D001561 4.4e-13 77.4 68 58.8
CARHR123900 Cardamine hirsuta HOM05D000587 ORTHO05D001561 4.4e-13 77.4 65 58.5
Duzib150G0980 Durio zibethinus HOM05D000587 ORTHO05D001561 5.8e-13 77.0 65 60.0
Thhalv10008030m.g Eutrema salsugineum HOM05D000587 ORTHO05D001561 5.8e-13 77.0 68 57.4
Sabra13G0124700 Salix brachista HOM05D000587 ORTHO05D001561 5.8e-13 77.0 64 60.9
Dinv21840 Davidia involucrata HOM05D000587 ORTHO05D001561 7.5e-13 76.6 64 57.8
A08p35860 Brassica napus HOM05D000587 ORTHO05D001561 9.8e-13 76.3 68 57.4
C08p02710 Brassica napus HOM05D000587 ORTHO05D001561 9.8e-13 76.3 69 56.5
BolC8t47067H Brassica oleracea HOM05D000587 ORTHO05D001561 9.8e-13 76.3 69 56.5
BraA09t42011Z Brassica rapa HOM05D000587 ORTHO05D001561 9.8e-13 76.3 68 57.4
Ca_16880_v3 Cicer arietinum L. HOM05D000587 ORTHO05D001561 9.8e-13 76.3 60 58.3
Sp1g05600 Schrenkiella parvula HOM05D000587 ORTHO05D001561 9.8e-13 76.3 70 55.7
Actinidia11619 Actinidia chinensis HOM05D000587 ORTHO05D001561 1.3e-12 75.9 64 57.8
BcaC07g42042 Brassica carinata HOM05D000587 ORTHO05D001561 1.7e-12 75.5 73 54.8
BcaC07g42542 Brassica carinata HOM05D000587 ORTHO05D001561 1.7e-12 75.5 73 54.8
BcaC07g42546 Brassica carinata HOM05D000587 ORTHO05D001561 1.7e-12 75.5 73 54.8
RcHm_v2.0_Chr5g0072751 Rosa chinensis HOM05D000587 ORTHO05D001561 1.7e-12 75.5 65 61.5
CANSAT54G0199 Cannabis sativa HOM05D000587 ORTHO05D001561 2.2e-12 75.1 64 64.1
EL10Ac7g15853 Beta vulgaris HOM05D000587 ORTHO05D001561 2.9e-12 74.7 61 60.7
AUR62036214 Chenopodium quinoa HOM05D000587 ORTHO05D001561 2.9e-12 74.7 60 60.0
Ciclev10001866m.g Citrus clementina HOM05D000587 ORTHO05D001561 2.9e-12 74.7 65 64.6
Lj1g0020743 Lotus japonicus HOM05D000587 ORTHO05D001561 3.7e-12 74.3 60 55.0
THA.LOC104826265 Tarenaya hassleriana HOM05D000587 ORTHO05D001561 3.7e-12 74.3 64 60.9
AUR62009731 Chenopodium quinoa HOM05D000587 ORTHO05D001561 4.9e-12 73.9 60 60.0
GSVIVG01032677001 Vitis vinifera HOM05D000587 ORTHO05D001561 4.9e-12 73.9 65 60.0
Potri.019G128900 Populus trichocarpa HOM05D000587 ORTHO05D001561 6.4e-12 73.6 65 60.0
CiPaw.13G064600 Carya illinoinensis HOM05D000587 ORTHO05D001561 8.3e-12 73.2 64 59.4
Sc12g0000120 Simmondsia chinensis HOM05D000587 ORTHO05D001561 8.3e-12 73.2 66 62.1
arahy.Tifrunner.gnm1.ann1.A3CY88 Arachis hypogaea HOM05D000587 ORTHO05D001561 1.1e-11 72.8 60 51.7
arahy.Tifrunner.gnm1.ann1.LQKG7Y Arachis hypogaea HOM05D000587 ORTHO05D001561 1.1e-11 72.8 60 51.7
BcaB02g06766 Brassica carinata HOM05D000587 ORTHO05D001561 1.1e-11 72.8 66 53.0
Lalb_Chr08g0239031 Lupinus albus HOM05D000587 ORTHO05D001561 1.1e-11 72.8 60 55.0
Potri.013G154800 Populus trichocarpa HOM05D000587 ORTHO05D001561 1.4e-11 72.4 64 56.2
vmacro02883 Vaccinium macrocarpon HOM05D000587 ORTHO05D001561 1.4e-11 72.4 64 57.8
Ah.08g215490 Amaranthus hybridus HOM05D000587 ORTHO05D001561 2.4e-11 71.6 61 55.7
Oeu064680.1 Olea europaea HOM05D000587 ORTHO05D001561 2.4e-11 71.6 65 61.5
Atru.chr1.2510 Acer truncatum HOM05D000587 ORTHO05D001561 3.2e-11 71.2 64 56.2
Prupe.6G042100 Prunus persica HOM05D000587 ORTHO05D001561 3.2e-11 71.2 64 56.2
Medtr3g094260 Medicago truncatula HOM05D000587 ORTHO05D001561 4.1e-11 70.9 60 53.3
CANSAT56G0391 Cannabis sativa HOM05D000587 ORTHO05D001561 7.0e-11 70.1 64 54.7
CANSAT56G4368 Cannabis sativa HOM05D000587 ORTHO05D001561 7.0e-11 70.1 64 54.7
PSO339G2734 Papaver somniferum HOM05D000587 ORTHO05D001561 7.0e-11 70.1 60 55.0
PSO384G2086 Papaver somniferum HOM05D000587 ORTHO05D001561 7.0e-11 70.1 60 55.0
Sed0021967 Sechium edule HOM05D000587 ORTHO05D001561 7.0e-11 70.1 68 60.3
FAN16G2907 Fragaria x ananassa HOM05D000587 ORTHO05D001561 1.2e-10 69.3 65 58.5
FAN11G1272 Fragaria x ananassa HOM05D000587 ORTHO05D001561 1.6e-10 68.9 64 57.8
Gohir.D08G221300 Gossypium hirsutum HOM05D000587 ORTHO05D001561 1.6e-10 68.9 65 58.5
Gorai.004G235000 Gossypium raimondii HOM05D000587 ORTHO05D001561 1.6e-10 68.9 65 58.5
Psat6g071280 Pisum sativum HOM05D000587 ORTHO05D001561 2.0e-10 68.6 60 51.7
CiPaw.01G305100 Carya illinoinensis HOM05D000587 ORTHO05D001561 2.7e-10 68.2 64 57.8
Lalb_Chr23g0272281 Lupinus albus HOM05D000587 ORTHO05D001561 2.7e-10 68.2 61 55.7
MSTRG.17915 Avicennia marina HOM05D000587 ORTHO05D001561 4.6e-10 67.4 65 58.5
ECA247G0950 Erigeron canadensis HOM05D000587 ORTHO05D001561 4.6e-10 67.4 64 51.6
Lalb_Chr11g0067951 Lupinus albus HOM05D000587 ORTHO05D001561 4.6e-10 67.4 60 50.0
THA.LOC104800787 Tarenaya hassleriana HOM05D000587 ORTHO05D001561 4.6e-10 67.4 67 58.2
VMungo1309G2186 Vigna mungo HOM05D000587 ORTHO05D001561 4.6e-10 67.4 62 48.4
CSS0030188 Camellia sinensis var. sinensis HOM05D000587 ORTHO05D001561 6.0e-10 67.0 58 60.3
CSS0045931 Camellia sinensis var. sinensis HOM05D000587 ORTHO05D001561 6.0e-10 67.0 58 60.3
Haze_24460 Corylus avellana HOM05D000587 ORTHO05D001561 6.0e-10 67.0 63 55.6
FAN21G1516 Fragaria x ananassa HOM05D000587 ORTHO05D001561 6.0e-10 67.0 67 56.7
Glyma.04G221200 Glycine max HOM05D000587 ORTHO05D001561 6.0e-10 67.0 62 50.0
Glyma.06G144600 Glycine max HOM05D000587 ORTHO05D001561 6.0e-10 67.0 62 50.0
C05p05020 Brassica napus HOM05D000587 ORTHO05D001561 7.8e-10 66.6 67 55.2
BolC5t29274H Brassica oleracea HOM05D000587 ORTHO05D001561 7.8e-10 66.6 67 55.2
Sabra19G0126600 Salix brachista HOM05D000587 ORTHO05D001561 7.8e-10 66.6 65 56.9
FvH4_3g40350 Fragaria vesca HOM05D000587 ORTHO05D001561 1.0e-09 66.2 65 56.9
Lalb_Chr11g0067961 Lupinus albus HOM05D000587 ORTHO05D001561 1.7e-09 65.5 60 51.7
Phvul.009G141500 Phaseolus vulgaris HOM05D000587 ORTHO05D001561 1.7e-09 65.5 62 46.8
A10p05440 Brassica napus HOM05D000587 ORTHO05D001561 2.3e-09 65.1 67 53.7
BraA10t42808Z Brassica rapa HOM05D000587 ORTHO05D001561 2.3e-09 65.1 67 53.7
HPP92_022858 Vanilla planifolia HOM05D000587 ORTHO05D001561 2.3e-09 65.1 64 48.4
CARHR006560 Cardamine hirsuta HOM05D000587 ORTHO05D001561 3.9e-09 64.3 46 63.0
HPP92_015432 Vanilla planifolia HOM05D000587 ORTHO05D001561 3.9e-09 64.3 66 53.0
BcaC02g07722 Brassica carinata HOM05D000587 ORTHO05D001561 5.0e-09 63.9 67 52.2
MD03G1052900 Malus domestica HOM05D000587 ORTHO05D001561 5.0e-09 63.9 64 53.1
MD07G1232100 Malus domestica HOM05D000587 ORTHO05D001561 8.6e-09 63.2 64 53.1
Nitab4.5_0002091g0090 Nicotiana tabacum HOM05D000587 ORTHO05D001561 8.6e-09 63.2 35 80.0
BolC4t27907H Brassica oleracea HOM05D000587 ORTHO05D001561 1.1e-08 62.8 65 49.2
Prupe.2G262200 Prunus persica HOM05D000587 ORTHO05D001561 1.1e-08 62.8 65 52.3
MD01G1164500 Malus domestica HOM05D000587 ORTHO05D001561 1.5e-08 62.4 64 50.0
Lj1C121T5 Lonicera japonica HOM05D000587 ORTHO05D001561 4.3e-08 60.8 42 66.7
BcaC05g24657 Brassica carinata HOM05D000587 ORTHO05D001561 1.2e-07 59.3 47 61.7
FAN10G0127 Fragaria x ananassa HOM05D000587 ORTHO05D001561 1.6e-07 58.9 64 46.9
FAN10G2801 Fragaria x ananassa HOM05D000587 ORTHO05D001561 1.6e-07 58.9 64 46.9
Lj1g0012549 Lotus japonicus HOM05D000587 ORTHO05D001561 2.1e-07 58.5 60 46.7
HanXRQChr08g0230691 Helianthus annuus HOM05D000587 ORTHO05D001561 2.8e-07 58.2 64 43.8
DCAR_004799 Daucus carota HOM05D000587 ORTHO05D001561 3.6e-07 57.8 65 52.3
FvH4_7g25720 Fragaria vesca HOM05D000587 ORTHO05D001561 3.6e-07 57.8 64 45.3
FAN03G2137 Fragaria x ananassa HOM05D000587 ORTHO05D001561 3.6e-07 57.8 60 46.7
FAN06G0904 Fragaria x ananassa HOM05D000587 ORTHO05D001561 3.6e-07 57.8 64 45.3
CDE12G0301 Ceratophyllum demersum HOM05D000587 ORTHO05D001561 4.7e-07 57.4 40 67.5
Lsat_1_v5_gn_9_13980 Lactuca sativa HOM05D000587 ORTHO05D001561 8.1e-07 56.6 64 42.2
Solyc06g049070.3 Solanum lycopersicum HOM05D000587 ORTHO05D001561 8.1e-07 56.6 63 49.2
Medtr3g094270 Medicago truncatula HOM05D000587 ORTHO05D001561 1.4e-06 55.8 60 48.3
RcHm_v2.0_Chr1g0371941 Rosa chinensis HOM05D000587 ORTHO05D001561 1.4e-06 55.8 64 43.8
Sopen06g015430 Solanum pennellii HOM05D000587 ORTHO05D001561 1.4e-06 55.8 63 49.2
arahy.Tifrunner.gnm1.ann1.A5R9D8 Arachis hypogaea HOM05D000587 ORTHO05D001561 1.8e-06 55.5 61 49.2
arahy.Tifrunner.gnm1.ann1.AV2BLP Arachis hypogaea HOM05D000587 ORTHO05D001561 1.8e-06 55.5 61 49.2
Rhsim13G0060100 Rhododendron simsii HOM05D000587 ORTHO05D001561 1.8e-06 55.5 64 54.7
CDE04G2009 Ceratophyllum demersum HOM05D000587 ORTHO05D001561 2.3e-06 55.1 40 65.0
TPR.G16140 Trifolium pratense HOM05D000587 ORTHO05D001561 2.3e-06 55.1 60 45.0
MSTRG.8373 Avicennia marina HOM05D000587 ORTHO05D001561 3.1e-06 54.7 64 51.6
Glyma.04G221100 Glycine max HOM05D000587 ORTHO05D001561 3.1e-06 54.7 60 45.0
Nitab4.5_0004599g0070 Nicotiana tabacum HOM05D000587 ORTHO05D001561 4.0e-06 54.3 63 50.8
Migut.F01255 Erythranthe guttata HOM05D000587 ORTHO05D001561 5.2e-06 53.9 64 46.9
Lalb_Chr08g0239021 Lupinus albus HOM05D000587 ORTHO05D001561 5.2e-06 53.9 60 46.7
Nitab4.5_0013741g0010 Nicotiana tabacum HOM05D000587 ORTHO05D001561 5.2e-06 53.9 64 50.0
Oeu044162.1 Olea europaea HOM05D000587 ORTHO05D001561 5.2e-06 53.9 64 50.0
Peaxi162Scf00739g00322 Petunia axillaris HOM05D000587 ORTHO05D001561 5.2e-06 53.9 64 48.4
SalBow5G1227 Salvia bowleyana HOM05D000587 ORTHO05D001561 5.2e-06 53.9 64 45.3
Lsat_1_v5_gn_8_109281 Lactuca sativa HOM05D000587 ORTHO05D001561 8.9e-06 53.1 64 46.9
SEGI_03777 Sequoiadendron giganteum HOM05D000587 ORTHO05D001561 8.9e-06 53.1 64 46.9


User provided reference genes

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