Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.3e-274 949.1 477 100.0
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 3.0e-231 805.1 516 81.2
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 1.3e-229 799.7 528 79.2
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 9.3e-225 783.5 525 78.7
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 2.1e-208 729.2 572 71.3
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 5.7e-198 694.5 528 68.9
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.7e-194 682.9 518 67.6
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.9e-193 679.5 528 66.9
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.6e-192 676.4 528 67.2
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 2.7e-192 675.6 528 67.0
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 1.5e-190 669.8 535 65.4
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 4.4e-190 668.3 528 65.9
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 4.8e-189 664.8 528 66.7
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 8.2e-189 664.1 525 66.3
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 1.4e-188 663.3 528 64.4
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 3.1e-188 662.1 520 66.0
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 5.9e-187 657.9 556 63.5
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 6.5e-186 654.4 541 65.4
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 9.4e-185 650.6 528 64.2
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 2.1e-184 649.4 528 63.6
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 2.1e-184 649.4 528 63.4
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.4e-183 646.7 528 63.8
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 2.0e-182 642.9 528 63.6
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 9.7e-182 640.6 528 62.1
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.3e-181 640.2 590 59.2
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 1.3e-181 640.2 528 64.0
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 1.7e-181 639.8 528 63.1
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 2.2e-181 639.4 528 64.4
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.8e-181 639.0 528 63.3
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 3.7e-181 638.6 528 63.3
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 8.2e-181 637.5 528 63.1
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.4e-180 636.7 528 62.9
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 1.8e-180 636.3 530 64.5
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.8e-180 636.3 528 62.9
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 4.1e-180 635.2 534 62.4
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 5.3e-180 634.8 528 62.5
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 5.3e-180 634.8 528 63.3
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 1.2e-179 633.6 529 62.8
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 1.6e-179 633.3 521 63.1
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 3.5e-179 632.1 528 61.9
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 3.5e-179 632.1 528 61.7
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 7.7e-179 630.9 526 62.5
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 5.0e-178 628.2 526 62.4
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 5.0e-178 628.2 527 64.7
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 1.1e-177 627.1 528 62.5
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 1.5e-177 626.7 528 61.9
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 3.2e-177 625.5 528 61.7
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 2.7e-176 622.5 504 63.5
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 4.7e-176 621.7 528 62.1
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 8.0e-176 620.9 529 60.9
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.3e-175 619.4 535 60.2
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 7.5e-174 614.4 523 61.4
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 1.7e-173 613.2 520 61.0
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 2.8e-173 612.5 527 60.0
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 6.3e-173 611.3 529 61.1
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 1.4e-172 610.1 522 61.7
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 2.4e-172 609.4 529 60.9
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 3.1e-172 609.0 598 55.0
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.2e-171 607.1 528 61.6
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 2.0e-171 606.3 523 61.4
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 4.5e-171 605.1 521 60.1
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.3e-170 603.6 527 61.1
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 2.9e-170 602.4 527 60.9
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 9.4e-169 597.4 527 59.4
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 9.4e-169 597.4 529 59.9
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.6e-168 596.7 522 60.7
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 6.1e-168 594.7 529 59.9
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 8.0e-168 594.3 527 58.8
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 1.4e-167 593.6 522 59.4
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 1.8e-167 593.2 528 59.5
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 3.0e-167 592.4 528 59.8
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 4.0e-167 592.0 528 59.1
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 6.8e-167 591.3 528 59.7
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 1.3e-165 587.0 526 59.3
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 1.1e-164 583.9 528 58.7
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 4.1e-164 582.0 528 58.7
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 5.4e-164 581.6 527 58.8
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 1.2e-163 580.5 528 58.0
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 2.0e-163 579.7 528 58.0
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.0e-163 579.7 528 58.5
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 5.9e-163 578.2 528 57.8
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 7.7e-163 577.8 528 58.0
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 7.7e-163 577.8 528 58.0
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 2.9e-162 575.9 521 60.3
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 5.0e-162 575.1 521 59.9
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 4.3e-161 572.0 528 58.5
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.5e-158 563.5 510 60.0
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 1.6e-155 553.5 525 57.3
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 2.0e-155 553.1 529 55.8
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 4.6e-155 552.0 453 63.1
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.0e-154 550.8 520 59.0
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 4.0e-151 538.9 529 56.7
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 1.4e-148 530.4 433 63.7
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 1.8e-143 513.5 524 54.2
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 2.9e-141 506.1 530 54.0
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 4.6e-139 498.8 498 55.8
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 6.4e-117 425.2 237 87.3
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 9.3e-116 421.4 472 50.4
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 2.3e-114 416.8 274 78.8
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 8.1e-112 408.3 476 48.5
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 3.2e-108 396.4 237 82.3
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 5.6e-105 385.6 515 43.3
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 1.8e-103 380.6 517 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 4.2e-100 369.4 524 41.4
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 7.6e-94 348.6 496 42.5
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 1.5e-89 334.3 512 38.5
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 1.1e-73 281.6 386 45.3
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 1.1e-63 248.4 585 30.6
CAN.G3.44 Capsicum annuum HOM05D004875 ORTHO05D005598 2.7e-54 217.2 110 97.3
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 2.8e-48 197.2 251 45.0
PSO532G0016 Papaver somniferum HOM05D004875 ORTHO05D005598 4.5e-46 189.9 247 44.5
PSO541G1704 Papaver somniferum HOM05D004875 ORTHO05D005598 4.5e-46 189.9 247 44.5
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 5.9e-46 189.5 271 43.2
PSO541G6542 Papaver somniferum HOM05D004875 ORTHO05D005598 7.8e-46 189.1 341 39.3
MELO3C027117.2 Cucumis melo HOM05D004875 ORTHO05D005598 1.7e-45 188.0 245 42.4
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 3.8e-45 186.8 454 33.3
C04p28250 Brassica napus HOM05D004875 ORTHO05D005598 1.6e-43 181.4 159 59.1
BolC4t24370H Brassica oleracea HOM05D004875 ORTHO05D005598 1.6e-43 181.4 159 59.1
PSO478G4214 Papaver somniferum HOM05D004875 ORTHO05D005598 3.6e-43 180.3 245 44.1
SHI19217 Sapria himalayana HOM05D004875 ORTHO05D005598 3.1e-34 150.6 162 53.1
BcaC02g10491 Brassica carinata HOM05D004875 ORTHO05D005598 1.3e-29 135.2 114 62.3
BcaC07g37054 Brassica carinata HOM05D004875 ORTHO05D005598 2.1e-27 127.9 122 59.0
C01p15940 Brassica napus HOM05D004875 ORTHO05D005598 4.7e-27 126.7 76 82.9
Cre11.g475050 Chlamydomonas reinhardtii HOM05D004875 ORTHO05D005598 1.8e-26 124.8 276 35.1
MCO11G770 Micromonas commoda HOM05D004875 ORTHO05D005598 4.4e-25 120.2 215 32.1
PSO339G3761 Papaver somniferum HOM05D004875 ORTHO05D005598 9.9e-25 119.0 388 31.2
PSO170G5144 Papaver somniferum HOM05D004875 ORTHO05D005598 1.7e-24 118.2 384 30.5
PSO541G5558 Papaver somniferum HOM05D004875 ORTHO05D005598 4.9e-24 116.7 246 33.7
PRCOL_00002473 Prasinoderma coloniale HOM05D004875 ORTHO05D005598 1.9e-23 114.8 363 29.2
SHI19216 Sapria himalayana HOM05D004875 ORTHO05D005598 5.4e-23 113.2 76 68.4
PSO384G1619 Papaver somniferum HOM05D004875 ORTHO05D005598 2.1e-19 101.3 287 32.4
SMO117G0137 Selaginella moellendorffii HOM05D004875 ORTHO05D005598 3.1e-18 97.4 89 52.8
SHI19214 Sapria himalayana HOM05D004875 ORTHO05D005598 5.2e-18 96.7 102 44.1
BolC8t47222H Brassica oleracea HOM05D004875 ORTHO05D005598 9.9e-17 92.4 60 75.0
Oeu042861.1 Olea europaea HOM05D004875 ORTHO05D005598 2.1e-14 84.7 46 84.8
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 7.8e-14 82.8 51 72.5
PGSC0003DMG400004010 Solanum tuberosum HOM05D004875 ORTHO05D005598 9.6e-12 75.9 70 58.6
SEGI_36322 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 1.6e-11 75.1 49 67.3
SHI19215 Sapria himalayana HOM05D004875 ORTHO05D005598 2.4e-10 71.2 140 34.3
Atru.chr3.4119 Acer truncatum HOM05D004875 ORTHO05D005598 4.4e-09 67.0 66 53.0
unitig_0.g437 Utricularia gibba HOM05D004875 ORTHO05D005598 5.4e-07 60.1 51 58.8


User provided reference genes

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