Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000002g0020 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.7e-174 615.9 315 100.0
Nitab4.5_0005130g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 7.9e-164 580.5 316 94.9
Peaxi162Scf00055g00107 Petunia axillaris HOM05D004875 ORTHO05D005598 1.7e-142 509.6 316 82.0
CAN.G3.43 Capsicum annuum HOM05D004875 ORTHO05D005598 3.7e-137 491.9 316 80.7
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 7.5e-130 467.6 316 76.9
Solyc09g057920.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 1.4e-128 463.4 316 76.3
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 6.0e-95 351.7 318 58.5
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 4.0e-91 339.0 319 55.8
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 5.8e-90 335.1 319 54.5
Oeu027574.2 Olea europaea HOM05D004875 ORTHO05D005598 1.7e-89 333.6 319 55.2
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 1.7e-89 333.6 313 56.5
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 2.9e-89 332.8 305 59.0
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.1e-88 330.9 314 56.1
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 7.1e-88 328.2 314 55.4
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.2e-87 327.4 313 55.0
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 2.1e-87 326.6 322 54.7
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 2.3e-86 323.2 321 53.9
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 2.8e-84 316.2 302 55.0
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 4.0e-83 312.4 301 54.8
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 1.5e-82 310.5 316 52.2
Cpa.g.sc2.356 Carica papaya HOM05D004875 ORTHO05D005598 3.4e-82 309.3 319 51.4
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 4.4e-82 308.9 318 51.9
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 3.2e-80 302.8 314 51.3
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 9.2e-80 301.2 322 49.7
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 9.2e-80 301.2 322 49.1
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 2.1e-79 300.1 317 50.2
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 2.1e-79 300.1 317 50.8
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 4.6e-79 298.9 315 52.1
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.0e-78 297.7 318 49.4
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.3e-78 297.4 317 49.8
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 1.3e-78 297.4 313 50.8
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 1.7e-78 297.0 316 50.9
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 5.1e-78 295.4 316 50.9
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 6.6e-78 295.0 319 48.3
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 1.1e-77 294.3 319 48.3
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.1e-77 294.3 319 48.0
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 3.6e-76 289.3 314 50.6
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 4.7e-76 288.9 315 48.3
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 4.7e-76 288.9 315 48.9
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 6.2e-76 288.5 311 47.3
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 8.1e-76 288.1 315 48.6
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.1e-75 287.7 317 46.4
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.1e-75 287.7 317 46.1
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 1.8e-75 287.0 314 49.0
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 5.2e-75 285.4 318 49.1
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 9.0e-75 284.6 305 48.2
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.2e-74 284.3 305 47.9
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 5.8e-74 282.0 315 47.6
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 1.1e-72 277.7 319 47.3
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 7.1e-72 275.0 317 47.0
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 9.3e-72 274.6 314 46.2
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 3.9e-70 269.2 313 47.6
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.1e-69 267.7 317 46.4
MELO3C025696.2 Cucumis melo HOM05D004875 ORTHO05D005598 3.3e-69 266.2 312 46.2
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 1.6e-68 263.8 295 48.5
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 4.8e-68 262.3 311 48.2
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 4.8e-68 262.3 316 45.9
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.1e-67 261.2 311 45.0
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 1.1e-67 261.2 313 44.7
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 2.4e-67 260.0 313 46.0
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 2.0e-66 256.9 316 47.2
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 3.4e-66 256.1 313 41.9
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 7.6e-66 255.0 317 42.3
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 9.9e-66 254.6 305 45.2
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 9.9e-66 254.6 315 46.0
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 1.7e-65 253.8 316 45.6
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 4.9e-65 252.3 318 44.0
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.4e-64 250.8 316 43.4
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 1.4e-64 250.8 316 46.2
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 1.9e-64 250.4 313 45.7
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 1.9e-64 250.4 321 43.9
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 3.2e-64 249.6 313 43.8
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 3.2e-64 249.6 312 44.2
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 4.2e-64 249.2 316 43.7
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 7.1e-64 248.4 316 45.3
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 1.6e-63 247.3 313 43.5
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 2.7e-63 246.5 316 43.4
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 1.0e-62 244.6 316 44.3
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 1.8e-62 243.8 319 42.6
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.3e-62 243.4 313 44.1
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 3.3e-61 239.6 312 42.3
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 4.3e-61 239.2 312 42.0
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 1.3e-60 237.7 315 42.2
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 1.4e-59 234.2 311 41.5
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 1.4e-59 234.2 311 41.5
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 2.4e-59 233.4 311 41.8
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 3.1e-59 233.0 311 42.1
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 6.9e-59 231.9 312 42.3
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 1.5e-58 230.7 311 41.5
unitig_0.g437 Utricularia gibba HOM05D004875 ORTHO05D005598 9.9e-58 228.0 312 43.9
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 3.2e-56 223.0 321 39.9
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 5.5e-56 222.2 287 41.5
SHI19214 Sapria himalayana HOM05D004875 ORTHO05D005598 2.1e-55 220.3 316 39.9
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 1.0e-54 218.0 308 37.7
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 1.3e-54 217.6 309 36.6
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 3.0e-54 216.5 311 40.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.5e-50 204.1 289 41.9
Atru.chr3.4119 Acer truncatum HOM05D004875 ORTHO05D005598 3.5e-47 193.0 187 51.9
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 2.2e-44 183.7 317 35.6
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 2.7e-39 166.8 322 35.1
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 3.9e-38 162.9 320 35.0
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 1.5e-34 151.0 324 33.6
Lsat_1_v5_gn_9_14740 Lactuca sativa HOM05D000378 ORTHO05D005598 2.4e-27 127.1 149 47.0
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 2.9e-17 93.6 102 46.1
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 1.2e-15 88.2 332 25.3
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 8.8e-14 82.0 81 49.4
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 3.3e-13 80.1 81 49.4
BcaB03g16392 Brassica carinata HOM05D004875 ORTHO05D005598 9.7e-13 78.6 162 32.1
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 1.2e-10 71.6 327 25.1
BcaB06g26910 Brassica carinata HOM05D000375 ORTHO05D000240 1.4e-06 58.2 96 35.4


User provided reference genes

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