Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1543.9 794 100.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1441.8 816 92.3
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 0.0e+00 1174.8 797 79.0
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 0.0e+00 1127.5 797 76.4
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 0.0e+00 1123.2 798 76.6
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 0.0e+00 1117.1 797 76.0
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 3.3e-307 1058.1 896 66.1
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 5.0e-114 416.4 784 37.2
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 3.2e-113 413.7 844 38.0
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.5e-107 393.3 862 35.3
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 9.7e-102 375.6 824 34.5
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.8e-101 374.0 638 39.7
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 5.3e-100 369.8 835 34.5
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 8.5e-98 362.5 806 33.9
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 8.0e-96 355.9 801 35.2
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 3.3e-94 350.5 804 35.0
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 3.3e-94 350.5 765 35.4
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 2.2e-93 347.8 778 35.3
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.5e-91 340.5 819 33.9
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.1e-88 331.3 805 33.2
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 3.6e-88 330.5 792 34.1
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 6.1e-88 329.7 775 35.0
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 8.0e-88 329.3 815 33.0
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.0e-87 328.9 436 45.0
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 2.2e-85 321.2 918 30.1
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.7e-85 320.5 456 43.4
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 2.4e-84 317.8 799 33.2
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 7.0e-84 316.2 813 33.2
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.7e-83 314.3 777 33.5
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.7e-83 312.8 758 33.9
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.9e-82 310.8 780 33.2
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 1.1e-81 308.9 807 33.0
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.5e-81 308.5 801 33.1
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 1.9e-81 308.1 738 33.7
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 3.3e-81 307.4 778 33.3
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 7.2e-81 306.2 841 31.5
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 3.6e-80 303.9 789 32.1
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 6.1e-80 303.1 483 40.8
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.8e-79 301.6 551 37.9
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 4.0e-79 300.4 869 32.8
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 7.5e-78 296.2 781 33.5
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.3e-77 295.4 798 32.6
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.7e-77 295.0 566 36.6
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.2e-77 294.7 775 32.8
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.2e-77 294.7 775 32.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 2.8e-77 294.3 804 32.0
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.7e-77 293.9 508 38.6
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 4.9e-77 293.5 752 33.4
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.9e-77 293.5 797 32.1
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 5.9e-75 286.6 505 37.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 7.8e-75 286.2 793 30.6
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 6.6e-74 283.1 778 32.9
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.5e-73 282.0 504 38.1
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 7.3e-73 279.6 791 31.2
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 4.7e-72 276.9 511 37.2
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 4.0e-71 273.9 792 31.2
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 4.0e-71 273.9 560 38.4
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 3.4e-70 270.8 521 37.6
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.3e-69 268.9 774 30.4
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 2.9e-69 267.7 449 39.0
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.4e-68 265.4 754 30.1
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 2.4e-68 264.6 786 31.0
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 7.0e-68 263.1 497 37.2
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.1e-65 255.8 792 30.3
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 7.3e-65 253.1 797 30.2
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 2.8e-64 251.1 783 29.4
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 4.7e-64 250.4 796 29.5
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 3.1e-63 247.7 802 29.9
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 1.1e-60 239.2 798 30.2
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 3.2e-60 237.7 849 28.6
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 5.4e-60 236.9 812 30.0
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 9.2e-60 236.1 616 32.3
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 1.2e-59 235.7 622 32.8
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 2.7e-59 234.6 908 28.0
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 7.8e-59 233.0 720 30.3
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.9e-57 228.4 777 30.5
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 3.1e-55 221.1 786 28.8
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 8.9e-55 219.5 639 32.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 2.6e-54 218.0 377 39.3
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 3.4e-54 217.6 224 50.4
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.9e-52 211.8 529 31.2
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 9.2e-52 209.5 823 28.3
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 9.2e-52 209.5 854 28.5
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 5.1e-50 203.8 794 28.1
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.5e-49 202.2 790 26.7
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 4.3e-49 200.7 642 30.1
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 6.2e-48 196.8 807 27.5
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.5e-46 192.2 500 32.4
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.6e-46 191.4 792 28.0
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.7e-45 188.7 428 33.6
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.9e-44 185.3 780 26.8
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 9.2e-44 183.0 465 33.5
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 1.2e-43 182.6 456 33.8
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 2.1e-43 181.8 795 27.5
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 3.5e-43 181.0 794 27.0
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 3.5e-43 181.0 794 27.0
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 7.8e-43 179.9 795 26.9
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 3.0e-42 177.9 556 30.4
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 6.2e-40 170.2 426 32.2
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.2e-38 166.0 678 27.1
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.5e-38 165.6 510 30.4
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 5.8e-38 163.7 525 30.9
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 4.9e-37 160.6 514 30.9
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 6.0e-35 153.7 457 30.4
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 7.8e-35 153.3 442 28.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 2.1e-32 145.2 467 27.2
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 8.7e-26 123.2 211 41.2
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.3e-18 98.6 92 51.1
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 7.4e-17 93.6 142 38.7
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 1.3e-10 72.8 260 31.5
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 1.5e-06 59.3 96 35.4
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.5e-06 59.3 96 35.4
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 7.7e-06 57.0 140 32.9
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 7.7e-06 57.0 140 32.9


User provided reference genes

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