Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 7.8e-124 447.2 236 100.0
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 6.6e-115 417.5 236 94.1
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 2.8e-81 305.8 240 71.7
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 1.1e-72 277.3 238 67.2
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 2.7e-68 262.7 235 63.8
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 9.7e-66 254.2 237 61.6
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 1.3e-65 253.8 238 60.5
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.3e-65 253.8 235 62.6
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 1.1e-64 250.8 221 63.8
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.2e-63 247.3 238 60.1
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 2.0e-63 246.5 236 59.3
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 2.0e-63 246.5 236 59.3
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.0e-62 244.2 238 59.2
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.7e-62 243.4 227 59.5
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 2.9e-62 242.7 240 58.8
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 5.0e-62 241.9 236 57.6
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 5.0e-62 241.9 239 59.0
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 1.5e-61 240.4 236 58.1
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.9e-61 240.0 229 60.3
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.9e-61 240.0 229 60.3
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.9e-61 240.0 229 60.3
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.9e-61 240.0 229 60.7
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 2.5e-61 239.6 239 57.3
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.2e-61 239.2 229 59.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 3.2e-61 239.2 235 58.7
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 9.4e-61 237.7 229 60.3
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.2e-60 237.3 238 56.7
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 2.1e-60 236.5 235 57.4
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 2.7e-60 236.1 238 55.9
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 3.6e-60 235.7 230 59.6
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.0e-59 234.2 227 56.8
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 1.0e-59 234.2 238 56.3
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.0e-59 234.2 230 58.7
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 5.2e-59 231.9 236 55.1
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 6.7e-59 231.5 237 54.9
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 2.0e-58 229.9 238 55.5
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.6e-58 229.6 229 59.8
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 2.4e-56 223.0 235 54.9
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 4.1e-56 222.2 234 54.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.6e-55 220.3 233 52.8
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.6e-55 220.3 233 52.8
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 2.0e-55 219.9 239 53.6
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 3.5e-55 219.2 239 53.6
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 3.5e-55 219.2 235 54.5
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 4.5e-55 218.8 238 53.8
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 4.5e-55 218.8 240 52.5
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.0e-54 217.6 234 51.7
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 2.2e-54 216.5 237 51.9
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 3.8e-54 215.7 233 52.4
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 5.0e-54 215.3 247 50.2
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 5.0e-54 215.3 220 56.8
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 2.5e-53 213.0 236 51.7
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 2.5e-53 213.0 238 51.7
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 4.2e-53 212.2 216 58.3
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 5.5e-53 211.8 235 54.9
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 7.2e-53 211.5 237 50.2
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 9.4e-53 211.1 227 52.0
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 2.7e-52 209.5 238 51.3
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 2.7e-52 209.5 240 51.2
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 3.6e-52 209.1 214 55.1
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 8.0e-52 208.0 227 52.9
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 1.4e-51 207.2 238 51.7
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.8e-51 206.8 224 53.1
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 4.0e-51 205.7 227 51.5
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 4.0e-51 205.7 241 50.2
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 5.2e-51 205.3 233 52.4
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 5.2e-51 205.3 237 51.1
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 6.8e-51 204.9 241 51.0
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 8.8e-51 204.5 236 51.7
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 8.8e-51 204.5 228 50.4
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 2.0e-50 203.4 217 51.6
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.0e-50 203.4 230 50.4
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 2.6e-50 203.0 222 55.0
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 2.6e-50 203.0 238 51.3
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 3.4e-50 202.6 237 50.2
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 4.4e-50 202.2 239 49.8
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 5.7e-50 201.8 243 51.4
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.3e-49 200.7 228 50.0
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.7e-49 200.3 238 49.6
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 2.2e-49 199.9 229 51.5
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 2.8e-49 199.5 250 46.4
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 2.8e-49 199.5 238 51.7
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 6.3e-49 198.4 234 49.1
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.1e-48 197.6 195 60.5
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 1.1e-48 197.6 241 50.2
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 1.4e-48 197.2 234 50.0
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.4e-48 196.4 234 48.7
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 5.4e-48 195.3 216 51.9
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 9.1e-48 194.5 234 48.7
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 3.5e-47 192.6 234 48.3
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.3e-46 190.7 234 47.9
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 2.9e-46 189.5 230 50.4
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.9e-46 189.5 244 48.0
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 3.8e-46 189.1 234 48.7
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 5.0e-46 188.7 234 48.3
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.9e-45 186.8 241 49.0
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.5e-45 186.4 235 48.1
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 2.5e-45 186.4 234 48.3
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 3.2e-45 186.0 237 49.4
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 5.5e-45 185.3 238 48.7
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 9.4e-45 184.5 234 47.9
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 9.4e-45 184.5 234 47.9
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.7e-44 183.0 227 48.5
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 3.6e-44 182.6 241 45.6
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 8.0e-44 181.4 235 47.7
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 8.0e-44 181.4 241 46.9
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 1.4e-43 180.6 240 48.3
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 4.0e-43 179.1 238 49.2
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 8.8e-43 177.9 235 47.2
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 8.8e-43 177.9 236 47.5
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 9.8e-42 174.5 235 46.4
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 7.7e-39 164.9 237 46.0
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.7e-38 163.7 233 44.6
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 2.3e-38 163.3 239 42.3
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 5.0e-38 162.2 172 54.7
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 4.0e-35 152.5 210 46.2
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 2.0e-34 150.2 226 42.9
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 2.6e-34 149.8 207 45.9
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 4.4e-34 149.1 234 41.5
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.9e-30 136.0 232 37.9
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 6.6e-30 135.2 234 38.0
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 8.6e-30 134.8 238 37.0
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 6.2e-28 128.6 159 53.5
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 5.2e-27 125.6 218 38.5
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 4.9e-25 119.0 184 42.9
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 1.4e-24 117.5 191 40.8
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 7.8e-23 111.7 118 56.8
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 1.0e-22 111.3 223 35.0
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 9.5e-21 104.8 203 36.9
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 8.9e-19 98.2 221 30.3
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 1.2e-18 97.8 146 44.5
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 9.2e-16 88.2 169 40.8
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.5e-13 80.9 240 29.6
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 1.9e-13 80.5 300 26.3
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 1.7e-09 67.4 213 29.6


User provided reference genes

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