Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 3.3e-56 221.5 110 100.0
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 2.8e-39 165.2 110 73.6
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 1.2e-37 159.8 104 70.2
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 2.0e-37 159.1 96 79.2
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 2.6e-37 158.7 97 72.2
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 5.8e-37 157.5 97 75.3
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 9.8e-37 156.8 102 71.6
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 1.7e-36 156.0 102 71.6
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 2.9e-36 155.2 103 68.0
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 3.7e-36 154.8 100 75.0
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 4.9e-36 154.5 104 69.2
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 1.4e-35 152.9 95 74.7
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 1.9e-35 152.5 101 64.4
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 2.4e-35 152.1 105 67.6
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 2.4e-35 152.1 110 69.1
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 4.1e-35 151.4 110 71.8
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 4.1e-35 151.4 98 71.4
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 5.4e-35 151.0 109 65.1
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 9.2e-35 150.2 101 73.3
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 9.2e-35 150.2 101 69.3
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 1.2e-34 149.8 100 69.0
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 1.2e-34 149.8 99 72.7
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 1.2e-34 149.8 102 72.5
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 1.6e-34 149.4 98 69.4
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 6.0e-34 147.5 91 74.7
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 7.8e-34 147.1 110 67.3
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.0e-33 146.7 110 66.4
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 1.0e-33 146.7 100 69.0
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 1.3e-33 146.4 101 66.3
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 1.3e-33 146.4 96 71.9
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 3.9e-33 144.8 110 67.3
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 5.0e-33 144.4 105 65.7
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 5.0e-33 144.4 88 76.1
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 8.6e-33 143.7 106 66.0
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 8.6e-33 143.7 99 67.7
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 1.1e-32 143.3 100 67.0
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.5e-32 142.9 101 69.3
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 1.9e-32 142.5 106 62.3
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 3.3e-32 141.7 107 65.4
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 3.3e-32 141.7 110 63.6
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 4.3e-32 141.4 107 64.5
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 7.3e-32 140.6 107 63.6
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 9.5e-32 140.2 94 71.3
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 9.5e-32 140.2 106 64.2
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 1.6e-31 139.4 105 66.7
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 2.1e-31 139.0 101 68.3
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 2.1e-31 139.0 101 68.3
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 4.7e-31 137.9 106 62.3
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 6.2e-31 137.5 101 67.3
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 8.1e-31 137.1 100 67.0
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 1.4e-30 136.3 110 57.3
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 3.1e-30 135.2 96 61.5
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 4.0e-30 134.8 98 58.2
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 4.0e-30 134.8 104 63.5
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 5.2e-30 134.4 94 60.6
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 6.8e-30 134.0 105 61.9
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 8.9e-30 133.7 94 58.5
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 8.9e-30 133.7 85 68.2
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 1.2e-29 133.3 103 60.2
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 1.2e-29 133.3 105 61.9
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 1.5e-29 132.9 110 59.1
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 1.5e-29 132.9 105 61.0
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 2.0e-29 132.5 97 67.0
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 2.6e-29 132.1 94 59.6
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 3.4e-29 131.7 96 62.5
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 3.4e-29 131.7 99 62.6
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 7.5e-29 130.6 104 57.7
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 3.7e-28 128.3 92 62.0
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 3.7e-28 128.3 99 62.6
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 4.9e-28 127.9 110 55.5
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 4.9e-28 127.9 82 70.7
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 6.4e-28 127.5 91 61.5
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.9e-27 125.9 85 64.7
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 2.4e-27 125.6 102 50.0
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 2.4e-27 125.6 102 50.0
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 4.1e-27 124.8 97 61.9
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 5.4e-27 124.4 76 68.4
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 5.4e-27 124.4 76 67.1
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 7.1e-27 124.0 76 67.1
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 7.1e-27 124.0 76 67.1
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 7.1e-27 124.0 76 67.1
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 7.1e-27 124.0 76 69.7
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 7.1e-27 124.0 110 51.8
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 9.2e-27 123.6 76 68.4
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 9.2e-27 123.6 102 51.0
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 9.2e-27 123.6 102 51.0
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 9.2e-27 123.6 76 67.1
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 9.2e-27 123.6 76 65.8
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 9.2e-27 123.6 105 57.1
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 1.2e-26 123.2 76 67.1
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 67.1
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 67.1
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 65.8
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 67.1
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 67.1
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 65.8
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 67.1
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 1.6e-26 122.9 76 65.8
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 2.7e-26 122.1 88 62.5
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 7.8e-26 120.6 76 64.5
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 7.8e-26 120.6 96 53.1
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 7.8e-26 120.6 76 64.5
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 7.8e-26 120.6 96 53.1
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 1.0e-25 120.2 94 54.3
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 2.3e-25 119.0 93 53.8
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 2.3e-25 119.0 96 53.1
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 2.3e-25 119.0 96 53.1
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 1.9e-24 115.9 92 59.8
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 5.6e-24 114.4 99 61.6
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 5.6e-24 114.4 99 61.6
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 5.6e-24 114.4 76 68.4
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 1.2e-21 106.7 87 56.3
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 4.4e-21 104.8 85 62.4
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 7.6e-21 104.0 81 54.3
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 3.2e-19 98.6 97 47.4
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 4.1e-19 98.2 59 72.9
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 5.4e-19 97.8 96 47.9
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 2.1e-18 95.9 96 44.8
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 1.1e-14 83.6 92 43.5
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 1.4e-14 83.2 96 39.6
Solyc01g109390.3 Solanum lycopersicum HOM05D001848 ORTHO05D001295 2.8e-07 58.9 108 34.3
CAN.G322.111 Capsicum annuum HOM05D001848 ORTHO05D001295 6.2e-07 57.8 104 28.8
PGSC0003DMG400025168 Solanum tuberosum HOM05D001848 ORTHO05D001295 8.1e-07 57.4 96 35.4
Glyma.10G297600 Glycine max HOM05D001848 ORTHO05D001295 1.4e-06 56.6 95 34.7
Glyma.20G248700 Glycine max HOM05D001848 ORTHO05D001295 1.4e-06 56.6 68 39.7
Phvul.007G001800 Phaseolus vulgaris HOM05D001848 ORTHO05D001295 1.8e-06 56.2 68 39.7
Sc17g0001710 Simmondsia chinensis HOM05D001848 ORTHO05D001295 1.8e-06 56.2 109 33.9
Sopen01g051580 Solanum pennellii HOM05D001848 ORTHO05D001295 1.8e-06 56.2 96 34.4
Sc17g0001750 Simmondsia chinensis HOM05D001848 ORTHO05D001295 6.9e-06 54.3 96 35.4


User provided reference genes

Program Settings