Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.9e-117 424.5 213 100.0
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.3e-97 358.2 213 86.9
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 3.3e-20 102.8 347 30.0
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 5.6e-20 102.1 316 29.1
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 1.2e-19 100.9 342 27.8
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 1.2e-17 94.4 301 28.2
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 7.5e-17 91.7 356 26.7
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 2.2e-16 90.1 335 26.6
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.9e-16 89.7 323 28.2
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.7e-16 89.4 323 28.2
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 1.4e-15 87.4 294 29.6
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 4.1e-15 85.9 231 32.0
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 4.6e-14 82.4 309 27.8
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 7.8e-14 81.6 322 27.0
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.3e-13 80.9 322 26.4
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.3e-13 80.9 311 27.0
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 3.0e-13 79.7 312 28.5
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 3.9e-13 79.3 304 27.6
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 8.6e-13 78.2 325 25.5
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 1.1e-12 77.8 253 28.9
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 1.1e-12 77.8 238 30.3
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 2.5e-12 76.6 211 30.8
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 2.5e-12 76.6 311 27.7
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 4.3e-12 75.9 331 26.3
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 1.2e-11 74.3 327 26.6
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 1.2e-11 74.3 234 28.6
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 2.8e-11 73.2 316 25.0
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 3.6e-11 72.8 304 27.0
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 6.2e-11 72.0 285 25.3
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 6.2e-11 72.0 301 25.2
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 1.1e-10 71.2 301 25.9
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.4e-10 70.9 313 26.5
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 1.4e-10 70.9 332 27.1
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 1.8e-10 70.5 292 25.3
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 2.3e-10 70.1 324 26.2
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.1e-10 69.7 216 30.1
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 4.0e-10 69.3 326 26.4
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.0e-10 69.3 365 25.8
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.2e-09 67.8 295 26.1
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-09 67.4 331 24.8
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.5e-09 67.4 220 28.6
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 2.0e-09 67.0 312 24.7
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 3.4e-09 66.2 330 24.8
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 5.8e-09 65.5 311 25.4
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 7.5e-09 65.1 321 26.5
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.5e-09 65.1 331 25.1
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 1.7e-08 63.9 296 26.0
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 2.2e-08 63.5 174 32.8
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 2.2e-08 63.5 333 25.5
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 2.9e-08 63.2 87 37.9
Ca_13423_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 2.9e-08 63.2 281 28.1
Ca_13439_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 2.9e-08 63.2 281 28.1
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 3.7e-08 62.8 93 34.4
Glyma.17G259300 Glycine max HOM05D013708 ORTHO05D003197 8.3e-08 61.6 90 41.1
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.1e-07 61.2 91 40.7
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.1e-07 61.2 334 24.3
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 1.9e-07 60.5 312 25.6
CARHR108180 Cardamine hirsuta HOM05D004095 ORTHO05D003197 1.9e-07 60.5 277 24.2
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 2.4e-07 60.1 351 23.6
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.4e-07 60.1 380 23.2
Potri.005G242300 Populus trichocarpa HOM05D004095 ORTHO05D003197 4.1e-07 59.3 246 27.2
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 5.4e-07 58.9 183 31.1
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 5.4e-07 58.9 202 29.2
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.4e-07 58.9 277 22.7
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 7.1e-07 58.5 223 25.1
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 7.1e-07 58.5 88 40.9
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.2e-06 57.8 85 41.2
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 1.6e-06 57.4 90 40.0
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 1.6e-06 57.4 103 33.0
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 2.1e-06 57.0 311 24.1
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 2.1e-06 57.0 299 23.4
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 2.7e-06 56.6 91 31.9
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 2.7e-06 56.6 79 36.7
TPR.G32858 Trifolium pratense HOM05D013708 ORTHO05D003197 2.7e-06 56.6 312 22.8
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.5e-06 56.2 266 25.9
BraA07t28113Z Brassica rapa HOM05D004095 ORTHO05D003197 4.6e-06 55.8 305 24.3
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 6.0e-06 55.5 287 25.1
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 6.0e-06 55.5 282 24.8
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 6.0e-06 55.5 89 36.0


User provided reference genes

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