Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00900 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.5e-118 429.5 216 100.0
Migut.M00475 Erythranthe guttata HOM05D006916 ORTHO05D008756 6.5e-117 424.1 214 99.1
Migut.M00564 Erythranthe guttata HOM05D006916 ORTHO05D008756 2.5e-108 395.6 228 90.4
Migut.O00691 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.9e-100 369.4 217 90.3
MSTRG.17032 Avicennia marina HOM05D006916 ORTHO05D008756 3.7e-56 222.2 230 53.9
SalBow5G3790 Salvia bowleyana HOM05D006916 ORTHO05D008756 5.4e-47 191.8 215 51.2
SalBow5G3761 Salvia bowleyana HOM05D006916 ORTHO05D008756 9.2e-47 191.0 215 50.7
Manes.10G143100 Manihot esculenta HOM05D006916 ORTHO05D008756 4.4e-41 172.2 238 47.1
Actinidia19391 Actinidia chinensis HOM05D006916 ORTHO05D008756 9.9e-41 171.0 230 48.3
Cc02_g27940 Coffea canephora HOM05D006916 ORTHO05D008756 9.9e-41 171.0 249 42.6
Prupe.2G012900 Prunus persica HOM05D006916 ORTHO05D008756 9.9e-41 171.0 248 46.0
Dinv09357 Davidia involucrata HOM05D006916 ORTHO05D008756 1.3e-40 170.6 256 47.7
Migut.M00562 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.7e-40 170.2 87 100.0
SGA_v2.0_scaffold119G32732 Striga asiatica HOM05D006916 ORTHO05D008756 4.9e-40 168.7 215 46.0
Actinidia31062 Actinidia chinensis HOM05D006916 ORTHO05D008756 1.1e-39 167.5 228 47.8
FvH4_7g01030 Fragaria vesca HOM05D006916 ORTHO05D008756 1.1e-39 167.5 251 44.6
MD02G1312000 Malus domestica HOM05D006916 ORTHO05D008756 1.4e-39 167.2 246 44.3
RcHm_v2.0_Chr1g0315961 Rosa chinensis HOM05D006916 ORTHO05D008756 1.9e-39 166.8 250 45.2
Dinv43446 Davidia involucrata HOM05D006916 ORTHO05D008756 2.4e-39 166.4 174 54.0
Rhsim07G0055500 Rhododendron simsii HOM05D006916 ORTHO05D008756 4.2e-39 165.6 253 47.0
CSS0007374 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 7.1e-39 164.9 253 45.8
Potri.001G267200 Populus trichocarpa HOM05D006916 ORTHO05D008756 9.3e-39 164.5 237 46.0
DCAR_022403 Daucus carota HOM05D006916 ORTHO05D008756 1.2e-38 164.1 230 47.0
vmacro13665 Vaccinium macrocarpon HOM05D006916 ORTHO05D008756 1.6e-38 163.7 249 43.0
FAN06G2642 Fragaria x ananassa HOM05D006916 ORTHO05D008756 2.7e-38 162.9 254 44.1
Gohir.D08G165500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 6.0e-38 161.8 252 42.9
Manes.07G005900 Manihot esculenta HOM05D006916 ORTHO05D008756 6.0e-38 161.8 243 44.9
Potri.009G061300 Populus trichocarpa HOM05D006916 ORTHO05D008756 6.0e-38 161.8 245 45.3
Thecc.01G411100 Theobroma cacao HOM05D006916 ORTHO05D008756 6.0e-38 161.8 246 43.9
FAN01G0033 Fragaria x ananassa HOM05D006916 ORTHO05D008756 7.8e-38 161.4 253 43.9
Gohir.A08G144500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 7.8e-38 161.4 256 41.4
Gorai.004G172600 Gossypium raimondii HOM05D006916 ORTHO05D008756 7.8e-38 161.4 253 42.7
TAR633G2378 Trochodendron aralioides HOM05D006916 ORTHO05D008756 7.8e-38 161.4 235 44.7
Nn7g36196 Nelumbo nucifera HOM05D006916 ORTHO05D008756 1.7e-37 160.2 239 45.6
Sabra09G0045200 Salix brachista HOM05D006916 ORTHO05D008756 3.0e-37 159.5 244 43.0
TAR633G2279 Trochodendron aralioides HOM05D006916 ORTHO05D008756 5.1e-37 158.7 237 43.5
FAN03G0110 Fragaria x ananassa HOM05D006916 ORTHO05D008756 8.7e-37 157.9 253 43.5
Sopen01g034200 Solanum pennellii HOM05D006916 ORTHO05D008756 8.7e-37 157.9 265 40.0
Duzib138G0699 Durio zibethinus HOM05D006916 ORTHO05D008756 2.5e-36 156.4 233 43.8
Eucgr.J01277 Eucalyptus grandis HOM05D006916 ORTHO05D008756 3.3e-36 156.0 226 46.0
Cfa010762 Carpinus fangiana HOM05D006916 ORTHO05D008756 9.6e-36 154.5 257 41.2
Solyc01g087140.4 Solanum lycopersicum HOM05D006916 ORTHO05D008756 1.3e-35 154.1 266 39.5
CiPaw.13G004800 Carya illinoinensis HOM05D006916 ORTHO05D008756 2.8e-35 152.9 244 43.0
MD07G1010600 Malus domestica HOM05D006916 ORTHO05D008756 2.8e-35 152.9 251 41.4
PGR044G2091 Punica granatum HOM05D006916 ORTHO05D008756 4.8e-35 152.1 256 41.0
Haze_03209 Corylus avellana HOM05D006916 ORTHO05D008756 6.2e-35 151.8 254 44.1
Nitab4.5_0001186g0060 Nicotiana tabacum HOM05D006916 ORTHO05D008756 8.1e-35 151.4 263 40.7
Lsat_1_v5_gn_1_107281 Lactuca sativa HOM05D006916 ORTHO05D008756 1.1e-34 151.0 242 41.3
QL04p006637 Quercus lobata HOM05D006916 ORTHO05D008756 4.0e-34 149.1 257 40.9
Ca_14513_v3 Cicer arietinum L. HOM05D006916 ORTHO05D008756 5.3e-34 148.7 245 41.2
Peaxi162Scf00428g00116 Petunia axillaris HOM05D006916 ORTHO05D008756 5.3e-34 148.7 261 39.5
Duzib268G1492 Durio zibethinus HOM05D006916 ORTHO05D008756 1.5e-33 147.1 255 44.7
ECA248G0998 Erigeron canadensis HOM05D006916 ORTHO05D008756 2.0e-33 146.7 226 41.6
TPR.G14555 Trifolium pratense HOM05D006916 ORTHO05D008756 2.0e-33 146.7 231 43.7
Lj3g0001567 Lotus japonicus HOM05D006916 ORTHO05D008756 2.6e-33 146.4 122 57.4
Psat5g212080 Pisum sativum HOM05D006916 ORTHO05D008756 3.4e-33 146.0 242 40.9
Nitab4.5_0000634g0200 Nicotiana tabacum HOM05D006916 ORTHO05D008756 4.5e-33 145.6 269 39.4
Cpa.g.sc640.2 Carica papaya HOM05D006916 ORTHO05D008756 5.8e-33 145.2 244 41.8
PGSC0003DMG400006867 Solanum tuberosum HOM05D006916 ORTHO05D008756 5.8e-33 145.2 257 38.1
Glyma.15G274400 Glycine max HOM05D006916 ORTHO05D008756 7.6e-33 144.8 255 38.8
CsaV3_3G032160 Cucumis sativus L. HOM05D006916 ORTHO05D008756 9.9e-33 144.4 237 42.6
CANSAT80G1950 Cannabis sativa HOM05D006916 ORTHO05D008756 1.7e-32 143.7 110 60.0
MELO3C023975.2 Cucumis melo HOM05D006916 ORTHO05D008756 8.4e-32 141.4 243 41.2
Aqoxy1G00267 Aquilegia oxysepala HOM05D006916 ORTHO05D008756 1.1e-31 141.0 257 38.5
VMungo1080G1111 Vigna mungo HOM05D006916 ORTHO05D008756 1.1e-31 141.0 220 40.0
Ciclev10031819m.g Citrus clementina HOM05D006916 ORTHO05D008756 1.4e-31 140.6 275 39.6
Sed0016369 Sechium edule HOM05D006916 ORTHO05D008756 2.4e-31 139.8 245 41.2
Atru.chr11.2661 Acer truncatum HOM05D000807 ORTHO05D000662 3.2e-31 139.4 267 37.5
THA.LOC104819073 Tarenaya hassleriana HOM05D006916 ORTHO05D008756 3.2e-31 139.4 108 58.3
TWI73G0045 Tripterygium wilfordii HOM05D006916 ORTHO05D008756 7.1e-31 138.3 110 58.2
Lalb_Chr20g0108041 Lupinus albus HOM05D006916 ORTHO05D008756 2.7e-30 136.3 257 37.0
Phvul.005G021800 Phaseolus vulgaris HOM05D006916 ORTHO05D008756 2.7e-30 136.3 220 40.0
arahy.Tifrunner.gnm1.ann1.P93ESD Arachis hypogaea HOM05D006916 ORTHO05D008756 7.9e-30 134.8 231 39.4
GSVIVG01032090001 Vitis vinifera HOM05D006916 ORTHO05D008756 7.9e-30 134.8 243 41.2
arahy.Tifrunner.gnm1.ann1.5BB2HR Arachis hypogaea HOM05D006916 ORTHO05D008756 1.0e-29 134.4 231 39.4
Medtr3g033530 Medicago truncatula HOM05D006916 ORTHO05D008756 8.7e-29 131.3 246 38.6
PSO384G3304 Papaver somniferum HOM05D006916 ORTHO05D008756 1.5e-28 130.6 257 36.2
AUR62009383 Chenopodium quinoa HOM05D006916 ORTHO05D008756 2.5e-28 129.8 166 42.8
ClCG10G012380 Citrullus lanatus HOM05D006916 ORTHO05D008756 2.5e-28 129.8 227 39.6
CSS0039404 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 5.6e-28 128.6 98 62.2
CARHR082790 Cardamine hirsuta HOM05D006916 ORTHO05D008756 3.6e-27 125.9 119 52.1
Migut.B01296 Erythranthe guttata HOM05D006916 ORTHO05D008756 4.8e-27 125.6 61 98.4
Carub.0003s0763 Capsella rubella HOM05D006916 ORTHO05D008756 8.1e-27 124.8 99 59.6
HanXRQChr01g0016271 Helianthus annuus HOM05D006916 ORTHO05D008756 8.1e-27 124.8 244 35.2
Sc11g0009190 Simmondsia chinensis HOM05D006916 ORTHO05D008756 1.1e-26 124.4 209 35.9
AT3G08490 Arabidopsis thaliana HOM05D006916 ORTHO05D008756 1.8e-26 123.6 129 51.2
Sp3g06960 Schrenkiella parvula HOM05D006916 ORTHO05D008756 4.0e-26 122.5 122 50.0
Hund16628 Selenicereus undatus HOM05D006916 ORTHO05D008756 6.9e-26 121.7 122 49.2
Sc11g0009180 Simmondsia chinensis HOM05D006916 ORTHO05D008756 2.0e-25 120.2 231 38.1
BcaB04g21256 Brassica carinata HOM05D006916 ORTHO05D008756 1.7e-24 117.1 118 50.8
Thhalv10022398m.g Eutrema salsugineum HOM05D006916 ORTHO05D008756 2.2e-24 116.7 114 50.0
A05p40250 Brassica napus HOM05D006916 ORTHO05D008756 1.1e-23 114.4 115 49.6
C05p59330 Brassica napus HOM05D006916 ORTHO05D008756 1.1e-23 114.4 115 49.6
BcaC05g29589 Brassica carinata HOM05D006916 ORTHO05D008756 1.9e-23 113.6 123 47.2
BcaC09g47975 Brassica carinata HOM05D006916 ORTHO05D008756 4.2e-23 112.5 158 44.3
BolC1t05505H Brassica oleracea HOM05D006916 ORTHO05D008756 7.1e-23 111.7 118 50.8
BolC5t34565H Brassica oleracea HOM05D006916 ORTHO05D008756 7.1e-23 111.7 117 47.9
Ciclev10032915m.g Citrus clementina HOM05D006916 ORTHO05D008756 6.0e-22 108.6 74 64.9
BraA01t04344Z Brassica rapa HOM05D006916 ORTHO05D008756 1.0e-21 107.8 98 55.1
Os03g0216500 Oryza sativa ssp. japonica HOM05D006916 ORTHO05D008756 1.9e-20 103.6 166 37.3
Zm00001eb008770 Zea mays HOM05D006916 ORTHO05D008756 4.3e-20 102.4 216 34.3
HPP92_026854 Vanilla planifolia HOM05D006916 ORTHO05D008756 1.2e-17 94.4 123 40.7
PSO339G1248 Papaver somniferum HOM05D006916 ORTHO05D008756 2.0e-17 93.6 257 31.1
AUR62023064 Chenopodium quinoa HOM05D006916 ORTHO05D008756 8.4e-16 88.2 309 26.5
SEGI_01223 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 8.2e-11 71.6 103 35.9
AL3G19450 Arabidopsis lyrata HOM05D006916 ORTHO05D008756 2.0e-09 67.0 49 63.3
SEGI_13769 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 7.6e-09 65.1 188 29.8
ATR0605G233 Amborella trichopoda HOM05D006916 ORTHO05D008756 2.9e-08 63.2 166 31.9
Glyma.09G192300 Glycine max HOM05D000939 ORTHO05D000745 8.5e-08 61.6 236 26.3
EL10Ac2g04327 Beta vulgaris HOM05D006916 ORTHO05D008756 1.4e-07 60.8 63 42.9
Potri.003G052900 Populus trichocarpa HOM05D000939 ORTHO05D000745 7.2e-07 58.5 127 27.6
Mapoly0003s0293 Marchantia polymorpha HOM05D000939 ORTHO05D000745 9.3e-07 58.2 187 27.3
Os01g0228500 Oryza sativa ssp. japonica HOM05D000939 ORTHO05D000745 2.7e-06 56.6 237 27.0
Zm00001eb375730 Zea mays HOM05D000939 ORTHO05D000745 2.7e-06 56.6 129 28.7
CDE05G0107 Ceratophyllum demersum HOM05D000939 ORTHO05D000745 3.6e-06 56.2 200 26.5
Ah.09g231060 Amaranthus hybridus HOM05D000939 ORTHO05D000745 4.6e-06 55.8 231 26.4


User provided reference genes

Program Settings