Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.0e-35 151.8 71 100.0
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.0e-35 151.8 71 100.0
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.9e-35 150.2 70 98.6
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 3.5e-27 124.4 70 78.6
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 9.5e-25 116.3 70 72.9
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 1.6e-24 115.5 70 72.9
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-24 115.2 70 74.3
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-24 115.2 70 74.3
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-24 115.2 70 74.3
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 3.6e-24 114.4 70 71.4
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 6.2e-24 113.6 70 72.9
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 6.2e-24 113.6 70 72.9
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 1.1e-23 112.8 70 71.4
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.1e-23 112.8 70 72.9
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 1.4e-23 112.5 70 70.0
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 1.4e-23 112.5 70 70.0
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 1.4e-23 112.5 70 70.0
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 1.4e-23 112.5 70 71.4
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.8e-23 112.1 70 72.9
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.8e-23 112.1 70 71.4
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 71.4
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 72.9
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 70.0
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.3e-23 111.7 70 72.9
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 3.1e-23 111.3 70 71.4
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 3.1e-23 111.3 70 70.0
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 3.1e-23 111.3 70 71.4
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 3.1e-23 111.3 70 71.4
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 3.1e-23 111.3 70 71.4
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 4.0e-23 110.9 70 71.4
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 4.0e-23 110.9 70 70.0
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 5.2e-23 110.5 70 68.6
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 8.9e-23 109.8 70 70.0
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 8.9e-23 109.8 70 68.6
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 8.9e-23 109.8 70 71.4
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 1.2e-22 109.4 70 71.4
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 1.2e-22 109.4 70 68.6
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.5e-22 109.0 70 70.0
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.5e-22 109.0 70 70.0
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 1.5e-22 109.0 70 67.1
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 68.6
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 70.0
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 68.6
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 70.0
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 70.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 70.0
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 71.4
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 2.0e-22 108.6 70 70.0
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 2.6e-22 108.2 70 70.0
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 2.6e-22 108.2 70 68.6
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.6e-22 108.2 70 68.6
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 2.6e-22 108.2 70 70.0
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 2.6e-22 108.2 70 71.4
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 68.6
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 68.6
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 70.0
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 70.0
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 70.0
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 70.0
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.4e-22 107.8 70 68.6
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 5.8e-22 107.1 70 67.1
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 67.1
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 67.1
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 67.1
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 67.1
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 65.7
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 65.7
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 65.7
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 65.7
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 7.5e-22 106.7 70 65.7
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 68.6
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 65.7
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 68.6
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 70.0
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 70.0
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 70.0
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 9.8e-22 106.3 70 65.7
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.3e-21 105.9 70 67.1
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.3e-21 105.9 70 65.7
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.3e-21 105.9 70 68.6
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 3.7e-21 104.4 70 68.6
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.7e-21 104.4 66 69.7
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 6.4e-21 103.6 66 68.2
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 6.4e-21 103.6 70 62.9
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 6.4e-21 103.6 70 64.3
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-21 103.2 70 62.9
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-21 103.2 70 62.9
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-21 103.2 70 62.9
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 8.3e-21 103.2 70 64.3
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.1e-20 102.8 70 64.3
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 1.4e-20 102.4 70 64.3
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 1.9e-20 102.1 70 64.3
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.9e-20 102.1 70 67.1
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 2.4e-20 101.7 66 69.7
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 4.1e-20 100.9 66 66.7
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 4.1e-20 100.9 70 65.7
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 7.0e-20 100.1 70 64.3
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.1e-19 98.6 66 65.2
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 2.7e-19 98.2 70 62.9
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 3.5e-19 97.8 70 61.4
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 4.6e-19 97.4 70 60.0
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 1.0e-18 96.3 71 62.0
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 1.7e-18 95.5 70 61.4
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 3.9e-18 94.4 65 64.6
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 1.5e-14 82.4 55 65.5
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.3e-13 79.3 55 61.8
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 6.0e-11 70.5 70 44.3
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.6e-08 62.4 33 69.7
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 6.2e-08 60.5 70 38.6
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 1.1e-07 59.7 69 42.0
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 1.1e-07 59.7 65 41.5
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 5.2e-07 57.4 36 75.0
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 5.8e-06 53.9 42 52.4


User provided reference genes

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