Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.2e-278 961.8 555 100.0
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 9.4e-253 876.7 562 87.4
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.0e-187 658.7 586 65.2
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.7e-185 653.3 586 63.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 3.6e-180 635.6 589 62.3
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.4e-177 624.8 586 62.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 1.6e-175 620.2 588 59.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.1e-171 607.4 587 58.8
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.8e-171 606.7 589 58.6
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 2.4e-171 606.3 589 60.1
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.0e-171 605.5 586 59.6
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 4.5e-170 602.1 586 59.4
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 2.2e-169 599.7 586 59.2
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 2.9e-169 599.4 615 56.9
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 1.3e-166 590.5 586 57.7
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.9e-166 589.0 584 58.2
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 6.7e-166 588.2 587 57.6
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.1e-165 587.4 582 56.9
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.5e-165 587.0 582 58.1
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 4.3e-165 585.5 584 58.2
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 5.6e-165 585.1 587 56.4
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.1e-164 583.2 583 58.0
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.2e-164 581.6 583 57.8
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.4e-163 580.5 586 56.8
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.4e-163 580.5 584 57.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 5.8e-162 575.1 586 56.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 6.5e-161 571.6 586 56.5
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.9e-160 570.1 583 57.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 3.2e-160 569.3 585 55.4
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 5.5e-160 568.5 580 56.6
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 9.3e-160 567.8 587 54.9
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.2e-159 567.4 599 54.6
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 2.1e-159 566.6 586 61.3
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 3.3e-157 559.3 589 55.0
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 4.8e-156 555.4 565 55.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.4e-155 553.9 580 54.3
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.1e-155 552.4 587 55.5
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 9.0e-155 551.2 582 54.6
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 2.6e-154 549.7 565 55.6
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.3e-153 547.4 582 54.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.5e-152 543.1 558 56.8
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 7.9e-151 538.1 565 54.5
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.3e-150 536.6 584 53.4
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.3e-148 530.8 567 55.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 8.2e-148 528.1 565 53.3
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.1e-147 527.7 575 55.0
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.4e-147 526.6 570 54.2
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 5.9e-146 521.9 564 53.2
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.8e-145 519.2 585 51.6
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.8e-145 519.2 570 53.9
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 8.5e-145 518.1 586 51.9
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.1e-144 517.7 588 52.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.4e-144 517.3 585 52.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.4e-144 517.3 576 52.3
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.9e-144 516.9 570 53.9
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.5e-144 516.5 575 52.0
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 4.2e-144 515.8 564 54.4
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 5.5e-144 515.4 575 52.3
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 9.4e-144 514.6 565 53.3
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 3.6e-143 512.7 568 52.6
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 3.6e-143 512.7 563 53.8
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 3.6e-143 512.7 564 53.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.0e-142 511.1 564 53.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.4e-142 510.8 572 53.3
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 8.8e-142 508.1 583 54.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.1e-141 507.7 567 51.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.6e-141 506.5 588 51.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 3.3e-141 506.1 567 51.5
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 3.3e-141 506.1 569 52.4
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 4.4e-141 505.8 567 51.5
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 2.2e-140 503.4 588 51.4
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 6.3e-140 501.9 581 52.2
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 2.4e-139 500.0 564 52.7
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 4.1e-139 499.2 589 49.1
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.2e-138 497.7 507 56.2
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 7.2e-136 488.4 571 52.2
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 3.6e-135 486.1 597 49.9
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.2e-134 482.3 579 50.3
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.7e-132 477.2 610 47.5
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 7.7e-130 468.4 587 48.7
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 6.5e-129 465.3 577 48.2
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.5e-128 464.2 578 48.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.4e-126 457.6 569 52.0
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 8.8e-126 454.9 623 48.3
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-125 454.5 573 46.8
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 5.7e-125 452.2 573 46.6
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.3e-121 441.0 564 47.3
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.7e-121 440.7 484 52.1
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 7.5e-117 425.2 579 46.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 2.3e-110 403.7 590 42.4
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 9.5e-104 381.7 415 55.4
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.7e-92 343.2 556 44.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.5e-82 310.1 269 66.2
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.6e-82 309.7 269 63.6
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.9e-81 306.6 280 60.4
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 5.1e-81 306.2 488 42.0
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.2e-79 301.6 269 62.1
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 8.9e-78 295.4 269 61.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 2.4e-70 270.8 280 54.6
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 4.0e-70 270.0 280 55.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.2e-69 268.5 585 38.8
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 1.5e-69 268.1 368 44.8
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 3.8e-68 263.5 267 55.8
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.7e-65 254.6 202 66.8
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.6e-63 248.1 585 35.4
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.2e-60 237.7 171 74.3
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.8e-52 210.3 178 62.4
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.3e-39 168.7 125 67.2
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.2e-34 152.1 191 45.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.1e-22 110.9 251 32.3
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 9.7e-16 89.4 129 42.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.8e-15 87.8 113 46.9
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 6.5e-12 76.6 68 57.4
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.1e-10 71.6 118 40.7
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.4e-09 68.9 94 42.6
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.7e-08 63.5 66 50.0


User provided reference genes

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