Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00814 Erythranthe guttata HOM05D002923 ORTHO05D003484 1.6e-154 549.7 336 100.0
SalBow3G0582 Salvia bowleyana HOM05D002923 ORTHO05D003484 1.1e-91 340.9 287 65.5
Oeu014666.1 Olea europaea HOM05D002923 ORTHO05D003484 8.0e-90 334.7 341 57.5
Dinv32457 Davidia involucrata HOM05D002923 ORTHO05D003484 2.6e-80 303.1 343 60.1
Nitab4.5_0009210g0030 Nicotiana tabacum HOM05D002923 ORTHO05D003484 5.8e-80 302.0 290 59.7
Hma1.2p1_0033F.1_g020360 Hydrangea macrophylla HOM05D002923 ORTHO05D003484 4.6e-77 292.4 342 50.6
CSS0015910 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 7.3e-75 285.0 291 56.4
CSS0019607 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 2.8e-74 283.1 292 56.2
PGSC0003DMG400000025 Solanum tuberosum HOM05D002923 ORTHO05D003484 8.1e-74 281.6 275 58.9
Nitab4.5_0002160g0030 Nicotiana tabacum HOM05D002923 ORTHO05D003484 1.4e-73 280.8 280 58.6
FvH4_7g13820 Fragaria vesca HOM05D002923 ORTHO05D003484 3.1e-73 279.6 290 55.2
FAN06G5053 Fragaria x ananassa HOM05D002923 ORTHO05D003484 3.1e-73 279.6 290 55.2
FAN01G2587 Fragaria x ananassa HOM05D002923 ORTHO05D003484 8.9e-73 278.1 290 54.8
GSVIVG01026852001 Vitis vinifera HOM05D002923 ORTHO05D003484 2.0e-72 276.9 292 55.8
Cpa.g.sc18.229 Carica papaya HOM05D002923 ORTHO05D003484 5.8e-72 275.4 287 55.4
Sopen01g038130 Solanum pennellii HOM05D002923 ORTHO05D003484 8.4e-71 271.6 276 57.6
FAN03G1194 Fragaria x ananassa HOM05D002923 ORTHO05D003484 1.4e-70 270.8 287 54.0
Peaxi162Scf00056g00313 Petunia axillaris HOM05D002923 ORTHO05D003484 1.4e-70 270.8 290 52.8
Solyc01g094340.3 Solanum lycopersicum HOM05D002923 ORTHO05D003484 1.4e-70 270.8 275 57.8
Potri.014G081000 Populus trichocarpa HOM05D002923 ORTHO05D003484 3.2e-70 269.6 289 54.7
Cc02_g37720 Coffea canephora HOM05D002923 ORTHO05D003484 5.1e-68 262.3 278 53.6
FAN06G1203 Fragaria x ananassa HOM05D002923 ORTHO05D003484 1.5e-67 260.8 278 55.0
TAR629G1449 Trochodendron aralioides HOM05D002923 ORTHO05D003484 3.3e-67 259.6 293 52.2
Duzib138G0954 Durio zibethinus HOM05D002923 ORTHO05D003484 5.6e-67 258.8 288 54.2
Sabra14G0058900 Salix brachista HOM05D002923 ORTHO05D003484 3.4e-64 249.6 289 51.6
Ah.05g176470 Amaranthus hybridus HOM05D002923 ORTHO05D003484 7.6e-64 248.4 288 50.7
Eucgr.D02269 Eucalyptus grandis HOM05D002923 ORTHO05D003484 4.9e-63 245.7 291 50.9
TAR374G0869 Trochodendron aralioides HOM05D002923 ORTHO05D003484 1.9e-62 243.8 294 51.4
Haze_15468 Corylus avellana HOM05D002923 ORTHO05D003484 2.1e-61 240.4 291 50.9
Prupe.2G163900 Prunus persica HOM05D002923 ORTHO05D003484 6.0e-61 238.8 342 44.2
Gohir.D12G109100 Gossypium hirsutum HOM05D002923 ORTHO05D003484 1.3e-60 237.7 287 51.6
Thecc.01G363000 Theobroma cacao HOM05D002923 ORTHO05D003484 1.7e-60 237.3 289 51.6
Gorai.008G118200 Gossypium raimondii HOM05D002923 ORTHO05D003484 3.9e-60 236.1 287 51.2
FAN10G1917 Fragaria x ananassa HOM05D002923 ORTHO05D003484 1.5e-59 234.2 221 58.4
Gohir.A12G105200 Gossypium hirsutum HOM05D002923 ORTHO05D003484 2.5e-59 233.4 287 50.9
AUR62033336 Chenopodium quinoa HOM05D002923 ORTHO05D003484 3.3e-59 233.0 290 48.3
CiPaw.02G028800 Carya illinoinensis HOM05D002923 ORTHO05D003484 7.3e-59 231.9 291 48.8
PSO782G3437 Papaver somniferum HOM05D002923 ORTHO05D003484 9.6e-59 231.5 294 50.0
ClCG05G001660 Citrullus lanatus HOM05D002923 ORTHO05D003484 1.6e-58 230.7 279 49.8
RcHm_v2.0_Chr1g0354001 Rosa chinensis HOM05D002923 ORTHO05D003484 2.8e-58 229.9 290 49.7
AUR62004321 Chenopodium quinoa HOM05D002923 ORTHO05D003484 4.8e-58 229.2 291 47.4
AUR62033323 Chenopodium quinoa HOM05D002923 ORTHO05D003484 1.4e-57 227.6 283 48.1
arahy.Tifrunner.gnm1.ann1.3BKK3V Arachis hypogaea HOM05D002923 ORTHO05D003484 3.1e-57 226.5 279 46.6
arahy.Tifrunner.gnm1.ann1.JYC8LX Arachis hypogaea HOM05D002923 ORTHO05D003484 5.3e-57 225.7 291 45.0
Sed0012599 Sechium edule HOM05D002923 ORTHO05D003484 5.3e-57 225.7 293 46.4
PSO478G2799 Papaver somniferum HOM05D002923 ORTHO05D003484 9.0e-57 224.9 294 48.6
MELO3C006123.2 Cucumis melo HOM05D002923 ORTHO05D003484 1.5e-56 224.2 281 48.8
Lj1g0018566 Lotus japonicus HOM05D002923 ORTHO05D003484 1.6e-53 214.2 351 41.0
MBI17_g35771_MAGBIO Magnolia biondii HOM05D002923 ORTHO05D003484 1.3e-52 211.1 297 46.8
Atru.chr5.479 Acer truncatum HOM05D002923 ORTHO05D003484 4.3e-51 206.1 201 57.7
CAN.G78.49 Capsicum annuum HOM05D002923 ORTHO05D003484 1.8e-49 200.7 202 56.4
COL.COLO4_12679 Corchorus olitorius HOM05D002923 ORTHO05D003484 2.6e-48 196.8 299 44.5
EL10Ac1g00534 Beta vulgaris HOM05D002923 ORTHO05D003484 1.2e-45 188.0 280 43.9
Sed0023570 Sechium edule HOM05D002923 ORTHO05D003484 1.8e-33 147.5 268 41.4
QL08p049488 Quercus lobata HOM05D002923 ORTHO05D003484 3.0e-28 130.2 198 40.4
FAN09G2253 Fragaria x ananassa HOM05D002923 ORTHO05D003484 8.8e-28 128.6 306 37.3
RcHm_v2.0_Chr3g0463941 Rosa chinensis HOM05D002923 ORTHO05D003484 1.1e-27 128.3 303 36.6
FvH4_6g12150 Fragaria vesca HOM05D002923 ORTHO05D003484 3.3e-27 126.7 306 36.9
FAN05G4887 Fragaria x ananassa HOM05D002923 ORTHO05D003484 3.3e-27 126.7 306 36.9
FAN14G4981 Fragaria x ananassa HOM05D002923 ORTHO05D003484 3.3e-27 126.7 306 36.9
FAN02G1394 Fragaria x ananassa HOM05D002923 ORTHO05D003484 7.4e-27 125.6 306 36.6
FAN14G3461 Fragaria x ananassa HOM05D002923 ORTHO05D003484 1.3e-26 124.8 306 36.6
Eucgr.B02770 Eucalyptus grandis HOM05D002923 ORTHO05D003484 2.0e-24 117.5 305 34.4
CDE05G0256 Ceratophyllum demersum HOM05D002923 ORTHO05D003484 1.7e-23 114.4 261 36.8
Ciclev10011119m.g Citrus clementina HOM05D002923 ORTHO05D003484 2.2e-23 114.0 315 34.0
MD01G1054300 Malus domestica HOM05D002923 ORTHO05D003484 2.2e-23 114.0 101 60.4
PGR004G1301 Punica granatum HOM05D002923 ORTHO05D003484 3.8e-23 113.2 305 32.8
Sabra16G0107100 Salix brachista HOM05D002923 ORTHO05D003484 3.8e-23 113.2 303 32.0
Cpa.g.sc56.107 Carica papaya HOM05D002923 ORTHO05D003484 1.9e-22 110.9 318 33.0
CANSAT35G0533 Cannabis sativa HOM05D002923 ORTHO05D003484 3.2e-22 110.2 287 34.5
TWI74G0041 Tripterygium wilfordii HOM05D002923 ORTHO05D003484 5.5e-22 109.4 310 32.3
Eucgr.B02769 Eucalyptus grandis HOM05D002923 ORTHO05D003484 9.4e-22 108.6 302 34.4
SalBow1G6626 Salvia bowleyana HOM05D002923 ORTHO05D003484 2.7e-21 107.1 302 32.8
Cfa017260 Carpinus fangiana HOM05D002923 ORTHO05D003484 4.7e-21 106.3 311 34.4
Haze_20942 Corylus avellana HOM05D002923 ORTHO05D003484 6.1e-21 105.9 309 34.0
Oeu028727.1 Olea europaea HOM05D002923 ORTHO05D003484 6.1e-21 105.9 299 33.4
MELO3C003221.2 Cucumis melo HOM05D002923 ORTHO05D003484 3.0e-20 103.6 319 32.9
ClCG04G007280 Citrullus lanatus HOM05D002923 ORTHO05D003484 6.7e-20 102.4 319 32.6
SalBow5G5371 Salvia bowleyana HOM05D002923 ORTHO05D003484 6.7e-20 102.4 303 32.0
Ah.12g060020 Amaranthus hybridus HOM05D002923 ORTHO05D003484 1.1e-19 101.7 223 38.6
Sed0008698 Sechium edule HOM05D002923 ORTHO05D003484 1.1e-19 101.7 318 33.3
Sed0027710 Sechium edule HOM05D002923 ORTHO05D003484 1.5e-19 101.3 318 33.0
Oeu040801.1 Olea europaea HOM05D002923 ORTHO05D003484 2.0e-19 100.9 299 33.4
Manes.08G087100 Manihot esculenta HOM05D002923 ORTHO05D003484 2.6e-19 100.5 308 31.2
AUR62037670 Chenopodium quinoa HOM05D002923 ORTHO05D003484 4.4e-19 99.8 306 32.0
Potri.006G095800 Populus trichocarpa HOM05D002923 ORTHO05D003484 4.4e-19 99.8 300 31.3
Prupe.6G270200 Prunus persica HOM05D002923 ORTHO05D003484 5.7e-19 99.4 306 31.4
AUR62041363 Chenopodium quinoa HOM05D002923 ORTHO05D003484 9.7e-19 98.6 306 31.4
MSTRG.26796 Avicennia marina HOM05D002923 ORTHO05D003484 1.3e-18 98.2 304 31.6
Lalb_Chr01g0022891 Lupinus albus HOM05D002923 ORTHO05D003484 1.7e-18 97.8 297 30.6
Migut.J00231 Erythranthe guttata HOM05D002923 ORTHO05D003484 2.8e-18 97.1 301 30.2
DCAR_018734 Daucus carota HOM05D002923 ORTHO05D003484 3.7e-18 96.7 296 33.1
AUR62042410 Chenopodium quinoa HOM05D002923 ORTHO05D003484 6.3e-18 95.9 306 31.0
Phvul.008G108700 Phaseolus vulgaris HOM05D002923 ORTHO05D003484 1.1e-17 95.1 281 33.8
Duzib093G0767 Durio zibethinus HOM05D002923 ORTHO05D003484 2.4e-17 94.0 312 30.4
VMungo1383G3014 Vigna mungo HOM05D002923 ORTHO05D003484 2.4e-17 94.0 300 31.0
Duzib128G0471 Durio zibethinus HOM05D002923 ORTHO05D003484 3.1e-17 93.6 319 31.3
Migut.L01991 Erythranthe guttata HOM05D002923 ORTHO05D003484 5.3e-17 92.8 307 32.9
Sabra06G0073700 Salix brachista HOM05D002923 ORTHO05D003484 5.3e-17 92.8 291 31.3
Manes.09G101700 Manihot esculenta HOM05D002923 ORTHO05D003484 7.0e-17 92.4 314 31.2
Atru.chr8.2139 Acer truncatum HOM05D002923 ORTHO05D003484 9.1e-17 92.0 179 36.3
DCAR_015460 Daucus carota HOM05D002923 ORTHO05D003484 9.1e-17 92.0 296 34.1
MD12G1159600 Malus domestica HOM05D002923 ORTHO05D003484 1.2e-16 91.7 150 42.0
ATR0680G246 Amborella trichopoda HOM05D002923 ORTHO05D003484 1.5e-16 91.3 304 30.3
Potri.016G110500 Populus trichocarpa HOM05D002923 ORTHO05D003484 7.7e-16 89.0 295 30.2
Solyc09g013080.3 Solanum lycopersicum HOM05D002923 ORTHO05D003484 1.3e-15 88.2 306 30.7
ATR0618G266 Amborella trichopoda HOM05D002923 ORTHO05D003484 2.2e-15 87.4 187 35.8
HanXRQChr15g0463991 Helianthus annuus HOM05D002923 ORTHO05D003484 2.2e-15 87.4 306 31.0
Lj1g0012741 Lotus japonicus HOM05D002923 ORTHO05D003484 2.9e-15 87.0 305 31.8
Lalb_Chr03g0042951 Lupinus albus HOM05D002923 ORTHO05D003484 3.8e-15 86.7 312 28.8
BraA05t19762Z Brassica rapa HOM05D002923 ORTHO05D003484 5.0e-15 86.3 170 35.9
TPR.G1591 Trifolium pratense HOM05D002923 ORTHO05D003484 5.0e-15 86.3 303 29.4
Glyma.18G195900 Glycine max HOM05D002923 ORTHO05D003484 6.5e-15 85.9 310 30.6
Glyma.18G195700 Glycine max HOM05D002923 ORTHO05D003484 8.5e-15 85.5 237 35.0
Manes.01G259701 Manihot esculenta HOM05D002923 ORTHO05D003484 8.5e-15 85.5 120 44.2
BcaB01g03731 Brassica carinata HOM05D002923 ORTHO05D003484 1.5e-14 84.7 310 28.7
CAN.G284.8 Capsicum annuum HOM05D002923 ORTHO05D003484 1.5e-14 84.7 300 29.7
CiPaw.10G154100 Carya illinoinensis HOM05D002923 ORTHO05D003484 1.5e-14 84.7 266 33.1
Ca_26813_v3 Cicer arietinum L. HOM05D002923 ORTHO05D003484 1.5e-14 84.7 308 29.2
SalBow5G1337 Salvia bowleyana HOM05D002923 ORTHO05D003484 1.5e-14 84.7 310 30.6
Thecc.05G023000 Theobroma cacao HOM05D002923 ORTHO05D003484 2.5e-14 84.0 314 30.6
Aa31LG5G23670 Aethionema arabicum HOM05D002923 ORTHO05D003484 4.2e-14 83.2 253 28.9
Glyma.18G196000 Glycine max HOM05D002923 ORTHO05D003484 7.2e-14 82.4 241 32.4
TWI53G0230 Tripterygium wilfordii HOM05D002923 ORTHO05D003484 7.2e-14 82.4 313 29.1
HanXRQChr10g0286971 Helianthus annuus HOM05D002923 ORTHO05D003484 1.2e-13 81.6 304 30.9
THA.LOC104806526 Tarenaya hassleriana HOM05D002923 ORTHO05D003484 2.7e-13 80.5 295 28.1
MSTRG.19035 Avicennia marina HOM05D002923 ORTHO05D003484 3.6e-13 80.1 306 30.7
Nn2g13595 Nelumbo nucifera HOM05D002923 ORTHO05D003484 4.7e-13 79.7 139 42.4
Nitab4.5_0000008g0600 Nicotiana tabacum HOM05D002923 ORTHO05D003484 4.7e-13 79.7 304 29.3
Aqoxy1G00729 Aquilegia oxysepala HOM05D002923 ORTHO05D003484 6.1e-13 79.3 336 28.0
MD04G1146400 Malus domestica HOM05D002923 ORTHO05D003484 6.1e-13 79.3 307 29.6
SalBow5G3414 Salvia bowleyana HOM05D002923 ORTHO05D003484 6.1e-13 79.3 180 36.1
Lalb_Chr19g0124831 Lupinus albus HOM05D002923 ORTHO05D003484 8.0e-13 79.0 154 35.1
A05p07970 Brassica napus HOM05D002923 ORTHO05D003484 1.0e-12 78.6 254 30.3
PGSC0003DMG400020325 Solanum tuberosum HOM05D002923 ORTHO05D003484 1.4e-12 78.2 303 29.7
HPP92_003357 Vanilla planifolia HOM05D002923 ORTHO05D003484 1.8e-12 77.8 262 30.9
HanXRQChr10g0291431 Helianthus annuus HOM05D002923 ORTHO05D003484 3.9e-12 76.6 236 32.6
Sc01g0006730 Simmondsia chinensis HOM05D002923 ORTHO05D003484 5.2e-12 76.3 303 28.1
Gorai.002G148400 Gossypium raimondii HOM05D002923 ORTHO05D003484 6.7e-12 75.9 296 29.4
Rhsim05G0205300 Rhododendron simsii HOM05D002923 ORTHO05D003484 6.7e-12 75.9 316 29.1
CiPaw.09G205400 Carya illinoinensis HOM05D002923 ORTHO05D003484 8.8e-12 75.5 157 35.7
Gohir.D13G092201 Gossypium hirsutum HOM05D002923 ORTHO05D003484 1.5e-11 74.7 302 28.1
Gohir.A04G087900 Gossypium hirsutum HOM05D002923 ORTHO05D003484 2.0e-11 74.3 130 37.7
Lsat_1_v5_gn_9_35780 Lactuca sativa HOM05D002923 ORTHO05D003484 2.0e-11 74.3 303 29.7
CARHR132610 Cardamine hirsuta HOM05D002923 ORTHO05D003484 3.3e-11 73.6 306 26.8
Gorai.012G111400 Gossypium raimondii HOM05D002923 ORTHO05D003484 3.3e-11 73.6 129 37.2
Nitab4.5_0006254g0020 Nicotiana tabacum HOM05D002923 ORTHO05D003484 3.3e-11 73.6 306 29.1
Gohir.D04G128300 Gossypium hirsutum HOM05D002923 ORTHO05D003484 7.4e-11 72.4 129 37.2
ECA247G2565 Erigeron canadensis HOM05D002923 ORTHO05D003484 9.7e-11 72.0 306 28.8
Gohir.A13G086290 Gossypium hirsutum HOM05D002923 ORTHO05D003484 1.7e-10 71.2 298 27.9
BcaB02g09223 Brassica carinata HOM05D002923 ORTHO05D003484 2.8e-10 70.5 324 29.3
BcaC02g11947 Brassica carinata HOM05D002923 ORTHO05D003484 8.2e-10 68.9 265 32.1
C04p09620 Brassica napus HOM05D002923 ORTHO05D003484 8.2e-10 68.9 265 32.1
BolC4t22569H Brassica oleracea HOM05D002923 ORTHO05D003484 8.2e-10 68.9 265 32.1
AT2G38040 Arabidopsis thaliana HOM05D002923 ORTHO05D003484 1.1e-09 68.6 313 25.2
arahy.Tifrunner.gnm1.ann1.45ZUWH Arachis hypogaea HOM05D002923 ORTHO05D003484 1.4e-09 68.2 307 28.0
BraA03t11342Z Brassica rapa HOM05D002923 ORTHO05D003484 1.4e-09 68.2 255 29.0
Thhalv10016287m.g Eutrema salsugineum HOM05D002923 ORTHO05D003484 3.1e-09 67.0 313 26.8
arahy.Tifrunner.gnm1.ann1.70V125 Arachis hypogaea HOM05D002923 ORTHO05D003484 4.1e-09 66.6 307 27.7
Peaxi162Scf00141g00125 Petunia axillaris HOM05D002923 ORTHO05D003484 5.3e-09 66.2 115 40.0
CSS0024926 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 1.2e-08 65.1 304 28.9
Medtr7g066870 Medicago truncatula HOM05D002923 ORTHO05D003484 1.6e-08 64.7 317 26.5
PSO384G4499 Papaver somniferum HOM05D002923 ORTHO05D003484 2.6e-08 63.9 115 38.3
TAR369G0530 Trochodendron aralioides HOM05D002923 ORTHO05D003484 2.6e-08 63.9 312 28.5
A03p21030 Brassica napus HOM05D002923 ORTHO05D003484 3.5e-08 63.5 121 34.7
PSO339G5831 Papaver somniferum HOM05D002923 ORTHO05D003484 3.5e-08 63.5 115 38.3
SGA_v2.0_scaffold106G30526 Striga asiatica HOM05D002923 ORTHO05D003484 5.9e-08 62.8 291 27.8
BcaC01g05570 Brassica carinata HOM05D002923 ORTHO05D003484 7.7e-08 62.4 253 27.3
C03p24770 Brassica napus HOM05D002923 ORTHO05D003484 7.7e-08 62.4 253 27.3
BolC3t14866H Brassica oleracea HOM05D002923 ORTHO05D003484 7.7e-08 62.4 253 27.3
CsaV3_4G025950 Cucumis sativus L. HOM05D002923 ORTHO05D003484 1.0e-07 62.0 318 27.7
AL4G35040 Arabidopsis lyrata HOM05D002923 ORTHO05D003484 1.3e-07 61.6 313 25.2
CSS0010473 Camellia sinensis var. sinensis HOM05D002923 ORTHO05D003484 1.3e-07 61.6 119 37.8
Cc06_g01720 Coffea canephora HOM05D002923 ORTHO05D003484 3.8e-07 60.1 299 26.8
EL10Ac7g17118 Beta vulgaris HOM05D002923 ORTHO05D003484 5.0e-07 59.7 128 35.2
CDE04G0231 Ceratophyllum demersum HOM05D002923 ORTHO05D003484 6.5e-07 59.3 113 38.1
Sp4g20360 Schrenkiella parvula HOM05D002923 ORTHO05D003484 6.5e-07 59.3 318 24.8
GSVIVG01034017001 Vitis vinifera HOM05D002923 ORTHO05D003484 8.5e-07 58.9 120 36.7
Psat0s1978g0280 Pisum sativum HOM05D002923 ORTHO05D003484 1.9e-06 57.8 78 39.7
Nn2g14845 Nelumbo nucifera HOM05D002923 ORTHO05D003484 2.5e-06 57.4 308 25.3
Hma1.2p1_0244F.1_g101180 Hydrangea macrophylla HOM05D002923 ORTHO05D003484 7.2e-06 55.8 301 26.9


User provided reference genes

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