Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00808 Erythranthe guttata HOM05D001695 ORTHO05D002735 2.6e-20 100.9 45 100.0
Migut.E00301 Erythranthe guttata HOM05D001695 ORTHO05D002735 2.2e-19 97.8 45 95.6
SGA_v2.0_scaffold267G46183 Striga asiatica HOM05D001695 ORTHO05D002735 5.3e-13 76.6 43 69.8
PSO135G0900 Papaver somniferum HOM05D001695 ORTHO05D002735 6.9e-13 76.3 43 72.1
Medtr3g080840 Medicago truncatula HOM05D001695 ORTHO05D002735 9.0e-13 75.9 43 72.1
TPR.G21319 Trifolium pratense HOM05D001695 ORTHO05D002735 1.2e-12 75.5 43 72.1
unitig_27.g25209 Utricularia gibba HOM05D001695 ORTHO05D002735 2.0e-12 74.7 42 73.8
Cpa.g.sc15.141 Carica papaya HOM05D001695 ORTHO05D002735 2.6e-12 74.3 45 71.1
Cc08_g16830 Coffea canephora HOM05D001695 ORTHO05D002735 3.4e-12 73.9 43 72.1
MSTRG.13709 Avicennia marina HOM05D001695 ORTHO05D002735 4.5e-12 73.6 43 69.8
Sabra01G0059900 Salix brachista HOM05D001695 ORTHO05D002735 4.5e-12 73.6 43 69.8
vmacro13844 Vaccinium macrocarpon HOM05D001695 ORTHO05D002735 4.5e-12 73.6 43 69.8
A09p13940 Brassica napus HOM05D001695 ORTHO05D002735 5.8e-12 73.2 43 69.8
BcaC04g22681 Brassica carinata HOM05D001695 ORTHO05D002735 7.6e-12 72.8 43 69.8
C09p16720 Brassica napus HOM05D001695 ORTHO05D002735 7.6e-12 72.8 43 69.8
BolC9t54572H Brassica oleracea HOM05D001695 ORTHO05D002735 7.6e-12 72.8 43 69.8
Manes.02G002100 Manihot esculenta HOM05D001695 ORTHO05D002735 7.6e-12 72.8 43 67.4
Lj2A156T52 Lonicera japonica HOM05D001695 ORTHO05D002735 1.0e-11 72.4 43 69.8
Oeu010736.1 Olea europaea HOM05D001695 ORTHO05D002735 1.0e-11 72.4 43 69.8
Ca_16296_v3 Cicer arietinum L. HOM05D001695 ORTHO05D002735 1.3e-11 72.0 43 69.8
Lalb_Chr24g0402771 Lupinus albus HOM05D001695 ORTHO05D002735 1.3e-11 72.0 43 67.4
Rhsim07G0077100 Rhododendron simsii HOM05D001695 ORTHO05D002735 1.3e-11 72.0 43 67.4
Thecc.03G219900 Theobroma cacao HOM05D001695 ORTHO05D002735 1.3e-11 72.0 43 69.8
Aqoxy7G00010 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 1.7e-11 71.6 43 67.4
BcaB07g31548 Brassica carinata HOM05D001695 ORTHO05D002735 1.7e-11 71.6 43 67.4
BraA09t37040Z Brassica rapa HOM05D001695 ORTHO05D002735 1.7e-11 71.6 43 67.4
ECA240G2548 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.7e-11 71.6 43 67.4
MD14G1137300 Malus domestica HOM05D001695 ORTHO05D002735 2.2e-11 71.2 43 67.4
Nitab4.5_0005544g0020 Nicotiana tabacum HOM05D001695 ORTHO05D002735 2.2e-11 71.2 43 67.4
Psat5g110120 Pisum sativum HOM05D001695 ORTHO05D002735 3.8e-11 70.5 42 69.0
THA.LOC104817401 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 3.8e-11 70.5 43 67.4
TAR629G0227 Trochodendron aralioides HOM05D001695 ORTHO05D002735 5.0e-11 70.1 43 65.1
BcaB07g31412 Brassica carinata HOM05D001695 ORTHO05D002735 6.5e-11 69.7 43 65.1
Eucgr.D01676 Eucalyptus grandis HOM05D001695 ORTHO05D002735 6.5e-11 69.7 45 62.2
QL02p027749 Quercus lobata HOM05D001695 ORTHO05D002735 8.4e-11 69.3 43 65.1
TWI60G1658 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 8.4e-11 69.3 43 62.8
GSVIVG01019663001 Vitis vinifera HOM05D001695 ORTHO05D002735 8.4e-11 69.3 43 67.4
BcaC04g22506 Brassica carinata HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
C09p18560 Brassica napus HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
BolC9t54752H Brassica oleracea HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
HanXRQChr03g0085241 Helianthus annuus HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
Potri.001G083300 Populus trichocarpa HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
Prupe.5G131200 Prunus persica HOM05D001695 ORTHO05D002735 1.1e-10 68.9 43 65.1
BraA09t37174Z Brassica rapa HOM05D001695 ORTHO05D002735 1.4e-10 68.6 43 62.8
DCAR_006556 Daucus carota HOM05D001695 ORTHO05D002735 1.4e-10 68.6 43 65.1
Actinidia27283 Actinidia chinensis HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 65.1
Cfa011915 Carpinus fangiana HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 65.1
Thhalv10023652m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 62.8
PGR031G0821 Punica granatum HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 62.8
Sp2g00880 Schrenkiella parvula HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 62.8
Sed0011976 Sechium edule HOM05D001695 ORTHO05D002735 1.9e-10 68.2 43 67.4
CANSAT21G0810 Cannabis sativa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 65.1
COL.COLO4_10808 Corchorus olitorius HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 65.1
FvH4_5g10820 Fragaria vesca HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
FAN04G1351 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
FAN08G2153 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
FAN13G1073 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
FAN18G1376 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
Lsat_1_v5_gn_6_81741 Lactuca sativa HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 62.8
RcHm_v2.0_Chr7g0187341 Rosa chinensis HOM05D001695 ORTHO05D002735 2.5e-10 67.8 43 60.5
CAN.G792.21 Capsicum annuum HOM05D001695 ORTHO05D002735 3.2e-10 67.4 42 64.3
Hma1.2p1_0456F.1_g156720 Hydrangea macrophylla HOM05D001695 ORTHO05D002735 3.2e-10 67.4 43 65.1
PGSC0003DMG402005859 Solanum tuberosum HOM05D001695 ORTHO05D002735 3.2e-10 67.4 42 64.3
Haze_09183 Corylus avellana HOM05D001695 ORTHO05D002735 4.2e-10 67.0 43 62.8
Nitab4.5_0000673g0210 Nicotiana tabacum HOM05D001695 ORTHO05D002735 4.2e-10 67.0 43 62.8
Solyc08g008630.4 Solanum lycopersicum HOM05D001695 ORTHO05D002735 4.2e-10 67.0 42 64.3
Carub.0002s0005 Capsella rubella HOM05D001695 ORTHO05D002735 5.5e-10 66.6 43 60.5
Ciclev10021724m.g Citrus clementina HOM05D001695 ORTHO05D002735 5.5e-10 66.6 43 65.1
Nn1g00413 Nelumbo nucifera HOM05D001695 ORTHO05D002735 5.5e-10 66.6 43 60.5
CiPaw.12G076600 Carya illinoinensis HOM05D001695 ORTHO05D002735 7.1e-10 66.2 43 62.8
A09p15280 Brassica napus HOM05D001695 ORTHO05D002735 9.3e-10 65.9 42 61.9
ClCG10G000790 Citrullus lanatus HOM05D001695 ORTHO05D002735 9.3e-10 65.9 43 62.8
Gohir.A02G098400 Gossypium hirsutum HOM05D001695 ORTHO05D002735 9.3e-10 65.9 43 65.1
Gohir.D03G085266 Gossypium hirsutum HOM05D001695 ORTHO05D002735 9.3e-10 65.9 43 65.1
Gorai.003G077200 Gossypium raimondii HOM05D001695 ORTHO05D002735 9.3e-10 65.9 43 65.1
Sopen08g004470 Solanum pennellii HOM05D001695 ORTHO05D002735 9.3e-10 65.9 42 64.3
Aa31LG2G1720 Aethionema arabicum HOM05D001695 ORTHO05D002735 1.2e-09 65.5 42 61.9
arahy.Tifrunner.gnm1.ann1.HKF9H0 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.2e-09 65.5 43 60.5
AUR62007063 Chenopodium quinoa HOM05D001695 ORTHO05D002735 2.1e-09 64.7 42 64.3
Glyma.13G001100 Glycine max HOM05D001695 ORTHO05D002735 2.1e-09 64.7 43 60.5
AUR62019928 Chenopodium quinoa HOM05D001695 ORTHO05D002735 2.7e-09 64.3 42 64.3
CARHR046210 Cardamine hirsuta HOM05D001695 ORTHO05D002735 3.5e-09 63.9 43 58.1
AT1G64680 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 4.6e-09 63.5 43 58.1
CDE11G0902 Ceratophyllum demersum HOM05D001695 ORTHO05D002735 4.6e-09 63.5 43 60.5
Os08g0114100 Oryza sativa ssp. japonica HOM05D001695 ORTHO05D002735 4.6e-09 63.5 43 58.1
Zm00001eb422930 Zea mays HOM05D001695 ORTHO05D002735 4.6e-09 63.5 43 60.5
Sc01g0010750 Simmondsia chinensis HOM05D001695 ORTHO05D002735 6.1e-09 63.2 43 58.1
Phvul.006G009940 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 1.0e-08 62.4 43 58.1
Zm00001eb260820 Zea mays HOM05D001695 ORTHO05D002735 1.3e-08 62.0 43 58.1
EL10Ac5g12416 Beta vulgaris HOM05D001695 ORTHO05D002735 1.8e-08 61.6 42 61.9
Hund02284 Selenicereus undatus HOM05D001695 ORTHO05D002735 1.8e-08 61.6 42 59.5
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 1.8e-08 61.6 43 58.1
VMungo0540G1432 Vigna mungo HOM05D001695 ORTHO05D002735 1.8e-08 61.6 43 58.1
AL2G10080 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 2.3e-08 61.2 43 55.8
Glyma.02G088200 Glycine max HOM05D001695 ORTHO05D002735 3.9e-08 60.5 43 58.1
Lj6g0013848 Lotus japonicus HOM05D001695 ORTHO05D002735 3.9e-08 60.5 44 59.1
Mapoly0052s0029 Marchantia polymorpha HOM05D001695 ORTHO05D002735 6.7e-08 59.7 44 50.0
CsaV3_3G000840 Cucumis sativus L. HOM05D001695 ORTHO05D002735 1.1e-07 58.9 42 59.5
Pp3c26_11090 Physcomitrium patens HOM05D001695 ORTHO05D002735 1.1e-07 58.9 43 58.1
Atru.chr9.1867 Acer truncatum HOM05D001695 ORTHO05D002735 1.5e-07 58.5 43 53.5
CSS0020159 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 5.7e-07 56.6 45 57.8
SEGI_06911 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 5.7e-07 56.6 43 53.5
Zm00001eb381060 Zea mays HOM05D001695 ORTHO05D002735 5.7e-07 56.6 43 53.5
ATR0579G157 Amborella trichopoda HOM05D001695 ORTHO05D002735 1.3e-06 55.5 44 54.5
AagrBONN_evm.TU.Sc2ySwM_344.2007 Anthoceros agrestis HOM05D001695 ORTHO05D002735 4.8e-06 53.5 42 52.4


User provided reference genes

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