Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 9.6e-136 486.9 254 100.0
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.1e-91 340.5 257 73.5
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 3.1e-86 322.4 262 70.6
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 4.1e-86 322.0 254 71.3
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.6e-85 320.1 256 70.7
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 2.6e-85 319.3 257 68.5
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 3.5e-85 318.9 257 68.5
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.0e-84 317.4 265 66.8
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 5.0e-84 315.1 258 68.6
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 5.5e-83 311.6 254 67.3
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 5.5e-83 311.6 256 65.6
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 5.5e-83 311.6 259 68.3
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 7.2e-83 311.2 259 68.3
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 1.2e-82 310.5 259 70.3
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.2e-82 310.5 257 68.1
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 1.6e-82 310.1 213 75.1
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.6e-82 310.1 231 73.2
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 1.4e-81 307.0 188 79.3
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.3e-81 306.2 281 63.7
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 6.7e-81 304.7 249 66.7
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 8.8e-81 304.3 264 66.3
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 2.0e-80 303.1 253 66.0
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.4e-80 302.0 269 64.3
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 5.7e-80 301.6 192 77.6
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 7.5e-80 301.2 194 75.8
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.3e-79 300.4 213 75.1
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.3e-79 300.4 254 63.4
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 3.7e-79 298.9 178 80.9
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 3.7e-79 298.9 191 79.1
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 8.2e-79 297.7 244 66.4
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.1e-78 297.4 233 69.1
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 1.4e-78 297.0 254 63.4
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.4e-78 297.0 178 81.5
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 4.1e-78 295.4 188 77.1
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 7.0e-78 294.7 255 63.1
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 7.0e-78 294.7 226 68.1
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.2e-77 293.9 262 63.7
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 1.2e-77 293.9 241 66.0
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 2.0e-77 293.1 239 65.7
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 4.5e-77 292.0 182 76.9
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 4.5e-77 292.0 257 63.0
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 4.5e-77 292.0 248 64.9
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 1.0e-76 290.8 182 78.6
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.3e-76 290.4 256 62.1
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.7e-76 290.0 178 79.8
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.7e-76 290.0 248 65.3
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 2.9e-76 289.3 256 62.9
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 1.1e-75 287.3 252 61.5
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.9e-75 286.6 201 70.6
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 1.9e-75 286.6 253 63.2
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.5e-75 286.2 257 63.0
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.5e-75 286.2 223 65.0
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 3.2e-75 285.8 256 61.7
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 3.2e-75 285.8 256 61.7
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 3.2e-75 285.8 256 61.7
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 4.2e-75 285.4 255 62.7
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 4.2e-75 285.4 224 66.1
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 4.2e-75 285.4 187 74.9
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 7.2e-75 284.6 229 66.4
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 7.2e-75 284.6 257 63.0
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 9.4e-75 284.3 231 65.4
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 9.4e-75 284.3 256 62.1
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.2e-74 283.9 256 61.7
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.2e-74 283.9 231 66.7
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.6e-74 283.5 239 64.0
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 2.7e-74 282.7 223 64.6
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 3.6e-74 282.3 223 67.3
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 6.1e-74 281.6 224 64.3
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 8.0e-74 281.2 260 60.0
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 2.3e-73 279.6 259 59.5
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 2.3e-73 279.6 226 64.6
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 4.0e-73 278.9 262 61.1
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 4.0e-73 278.9 224 65.2
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.2e-73 278.5 259 59.1
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 2.0e-72 276.6 208 68.8
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 4.4e-72 275.4 158 85.4
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 9.8e-72 274.2 230 63.0
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 5.4e-70 268.5 272 59.6
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 2.0e-69 266.5 177 74.6
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.0e-68 264.2 181 70.7
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.5e-67 259.6 184 71.2
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 5.5e-67 258.5 186 66.1
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 7.2e-67 258.1 186 67.2
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 1.6e-66 256.9 186 67.7
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 2.1e-66 256.5 261 56.7
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 4.7e-66 255.4 183 72.1
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.3e-65 253.1 187 69.0
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 1.2e-64 250.8 186 65.6
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.0e-64 250.0 187 68.4
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 2.6e-64 249.6 195 65.6
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 5.7e-64 248.4 182 69.8
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.3e-63 247.3 186 66.7
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.2e-63 246.5 185 66.5
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 4.9e-63 245.4 186 65.1
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.6e-61 240.4 220 57.3
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 2.7e-61 239.6 191 62.3
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 5.9e-61 238.4 191 63.4
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 1.7e-60 236.9 189 63.0
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 6.6e-60 235.0 181 60.8
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 7.3e-59 231.5 197 57.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 7.3e-59 231.5 191 59.7
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 9.5e-59 231.1 181 60.2
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 1.2e-58 230.7 138 81.2
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.6e-58 230.3 181 59.7
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 2.8e-58 229.6 178 60.7
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 2.8e-58 229.6 178 60.7
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 8.0e-58 228.0 181 59.7
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 8.0e-58 228.0 180 60.0
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 5.2e-57 225.3 189 56.6
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 8.9e-57 224.6 236 51.3
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.2e-56 224.2 196 61.7
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 2.0e-56 223.4 181 59.1
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 4.4e-56 222.2 189 56.1
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 5.7e-56 221.9 189 56.1
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.3e-55 220.7 138 77.5
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 2.9e-55 219.5 189 56.1
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 6.4e-55 218.4 138 76.8
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 1.8e-54 216.9 188 53.2
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-54 216.1 182 57.1
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-54 216.1 186 55.4
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-54 216.1 177 59.9
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-54 216.1 182 57.1
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-54 216.1 186 55.4
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 3.2e-54 216.1 192 58.3
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 3.2e-54 216.1 183 57.4
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.0e-54 214.9 138 75.4
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 9.2e-54 214.5 179 59.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.5e-53 212.6 138 74.6
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 3.3e-51 206.1 188 56.4
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 1.6e-50 203.8 181 56.9
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.2e-48 197.6 181 55.2
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 7.5e-48 194.9 154 59.1
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 7.5e-48 194.9 154 59.1
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 8.3e-47 191.4 185 53.5
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 1.1e-46 191.0 185 53.5
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 2.3e-44 183.3 196 52.6
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.9e-44 182.6 154 55.2
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 5.0e-44 182.2 160 54.4
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 1.5e-43 180.6 114 76.3
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 4.4e-40 169.1 162 51.9
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 7.1e-38 161.8 120 68.3
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.1e-33 146.4 103 64.1
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.6e-32 141.7 90 76.7
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 4.9e-31 139.0 90 74.4
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 3.5e-29 132.9 196 44.4
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.3e-28 130.2 73 83.6
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 6.6e-28 128.6 178 43.3
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.6e-26 122.9 250 38.0
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.5e-24 117.5 122 53.3
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 1.3e-23 114.4 167 37.7
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.2e-23 113.6 90 55.6
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 3.8e-23 112.8 180 41.1
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.6e-21 107.5 107 57.9
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 3.5e-21 106.3 65 81.5
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 1.6e-18 97.4 68 73.5
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 1.4e-17 94.4 174 35.6
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 4.0e-17 92.8 115 58.3
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 9.0e-17 91.7 67 64.2
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.3e-15 87.8 179 30.2
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 9.3e-14 81.6 66 59.1
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 5.6e-11 72.4 58 65.5
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.2e-07 60.5 36 75.0


User provided reference genes

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