Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.7e-140 502.7 251 100.0
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.3e-129 465.7 250 91.6
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 8.7e-81 304.3 252 62.3
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 7.6e-77 291.2 254 59.1
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 6.9e-70 268.1 264 56.4
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 5.1e-65 251.9 252 51.2
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 1.3e-63 247.3 250 52.4
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.6e-63 246.9 250 50.4
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.5e-61 240.4 253 49.8
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 2.0e-61 240.0 250 49.6
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 3.4e-61 239.2 250 49.6
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 4.5e-61 238.8 250 50.4
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.5e-61 238.8 258 49.6
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 4.5e-61 238.8 250 49.6
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 4.5e-61 238.8 247 50.6
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 2.9e-60 236.1 249 51.0
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.8e-60 235.7 252 50.4
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.0e-60 235.3 250 50.0
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 1.1e-59 234.2 251 47.4
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 1.4e-59 233.8 250 48.8
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 1.4e-59 233.8 251 49.4
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 2.5e-59 233.0 250 49.6
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.2e-58 230.7 252 49.6
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 2.7e-58 229.6 250 50.0
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 3.0e-57 226.1 254 48.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.9e-57 225.7 250 48.4
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 4.3e-56 222.2 251 49.4
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.8e-55 219.5 250 46.4
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.1e-54 217.6 249 45.4
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.8e-54 216.9 258 48.1
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 1.2e-53 214.2 249 47.8
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.2e-53 214.2 231 49.4
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 1.5e-53 213.8 254 48.8
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 2.0e-53 213.4 232 48.3
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 5.9e-53 211.8 251 49.4
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 5.9e-53 211.8 250 46.0
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 2.2e-52 209.9 255 44.7
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 6.5e-52 208.4 253 44.3
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 7.2e-51 204.9 255 45.1
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 7.2e-51 204.9 252 45.6
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.2e-50 204.1 254 45.7
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 2.7e-50 203.0 251 44.6
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 6.1e-50 201.8 252 44.8
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 7.9e-50 201.4 251 44.2
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.8e-49 200.3 254 44.1
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 1.8e-49 200.3 254 44.5
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 3.0e-49 199.5 233 47.6
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 3.9e-49 199.1 251 43.4
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 3.9e-49 199.1 234 47.4
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 5.1e-49 198.7 255 44.7
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 5.1e-49 198.7 250 43.2
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 6.7e-49 198.4 253 44.3
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.5e-48 197.2 257 43.6
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 1.5e-48 197.2 258 43.8
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 2.0e-48 196.8 244 45.1
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 2.6e-48 196.4 251 43.0
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 3.3e-48 196.1 254 43.3
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 3.3e-48 196.1 253 42.7
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 3.3e-48 196.1 227 46.7
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 3.3e-48 196.1 239 44.8
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 4.4e-48 195.7 252 43.3
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 4.4e-48 195.7 252 43.3
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 4.4e-48 195.7 250 44.0
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 7.4e-48 194.9 256 42.2
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 6.3e-47 191.8 255 43.9
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-46 191.0 250 44.0
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.8e-46 190.3 254 42.5
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 3.1e-46 189.5 255 40.8
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 7.0e-46 188.3 250 42.4
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 7.0e-46 188.3 246 43.5
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.6e-45 186.4 252 42.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 1.0e-44 184.5 252 43.3
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 5.0e-44 182.2 295 38.0
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 7.2e-43 178.3 259 39.4
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.2e-42 177.6 239 44.4
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.6e-42 177.2 256 39.1
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 6.1e-42 175.3 229 45.0
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 1.8e-41 173.7 248 42.7
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 2.3e-41 173.3 267 40.4
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 3.0e-41 172.9 254 38.6
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 4.0e-41 172.6 253 41.9
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 5.2e-41 172.2 253 42.3
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 8.8e-41 171.4 236 40.3
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.1e-40 171.0 253 40.3
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 3.3e-40 169.5 255 38.0
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 4.4e-40 169.1 246 39.0
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 5.7e-40 168.7 229 43.2
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 2.2e-39 166.8 273 38.5
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 6.3e-39 165.2 257 40.5
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 6.3e-39 165.2 252 39.7
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 2.4e-38 163.3 204 45.6
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 4.1e-38 162.5 255 39.2
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 5.3e-38 162.2 262 39.7
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 5.9e-37 158.7 188 47.9
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 2.2e-36 156.8 131 60.3
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 3.2e-35 152.9 155 51.6
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 2.3e-33 146.7 229 41.5
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 5.2e-33 145.6 148 50.7
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 7.5e-32 141.7 234 38.5
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 7.0e-30 135.2 154 46.8
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 2.5e-19 100.1 176 39.8
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 9.5e-19 98.2 322 26.4
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 5.7e-16 89.0 116 41.4
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 6.4e-15 85.5 130 38.5
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 4.6e-13 79.3 89 46.1
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 7.8e-13 78.6 184 33.7
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.3e-12 77.8 264 28.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 1.2e-08 64.7 162 27.8
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 1.2e-08 64.7 162 27.8
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 1.9e-06 57.4 46 52.2


User provided reference genes

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