Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00691 Erythranthe guttata HOM05D006916 ORTHO05D008756 3.3e-133 478.4 245 100.0
Migut.M00564 Erythranthe guttata HOM05D006916 ORTHO05D008756 8.7e-102 374.0 236 84.7
Migut.O00900 Erythranthe guttata HOM05D006916 ORTHO05D008756 2.1e-100 369.4 217 90.3
Migut.M00475 Erythranthe guttata HOM05D006916 ORTHO05D008756 9.0e-99 364.0 215 89.3
MSTRG.17032 Avicennia marina HOM05D006916 ORTHO05D008756 2.9e-49 199.5 238 50.0
Migut.M00562 Erythranthe guttata HOM05D006916 ORTHO05D008756 1.2e-45 187.6 105 91.4
Manes.10G143100 Manihot esculenta HOM05D006916 ORTHO05D008756 1.9e-40 170.2 243 46.5
Dinv09357 Davidia involucrata HOM05D006916 ORTHO05D008756 4.3e-40 169.1 256 46.5
Actinidia19391 Actinidia chinensis HOM05D006916 ORTHO05D008756 1.2e-39 167.5 227 48.0
CSS0007374 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 3.6e-39 166.0 254 45.3
SGA_v2.0_scaffold119G32732 Striga asiatica HOM05D006916 ORTHO05D008756 3.6e-39 166.0 211 46.9
SalBow5G3790 Salvia bowleyana HOM05D006916 ORTHO05D008756 1.4e-38 164.1 215 47.4
SalBow5G3761 Salvia bowleyana HOM05D006916 ORTHO05D008756 2.3e-38 163.3 215 47.0
Prupe.2G012900 Prunus persica HOM05D006916 ORTHO05D008756 1.5e-37 160.6 248 44.8
Actinidia31062 Actinidia chinensis HOM05D006916 ORTHO05D008756 4.4e-37 159.1 230 45.2
Rhsim07G0055500 Rhododendron simsii HOM05D006916 ORTHO05D008756 9.8e-37 157.9 254 44.9
Cc02_g27940 Coffea canephora HOM05D006916 ORTHO05D008756 1.3e-36 157.5 249 40.6
vmacro13665 Vaccinium macrocarpon HOM05D006916 ORTHO05D008756 1.7e-36 157.1 246 41.9
Manes.07G005900 Manihot esculenta HOM05D006916 ORTHO05D008756 4.9e-36 155.6 244 42.6
Thecc.01G411100 Theobroma cacao HOM05D006916 ORTHO05D008756 1.1e-35 154.5 260 43.1
Gohir.D08G165500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 1.4e-35 154.1 252 42.1
Duzib138G0699 Durio zibethinus HOM05D006916 ORTHO05D008756 1.9e-35 153.7 241 42.7
Gorai.004G172600 Gossypium raimondii HOM05D006916 ORTHO05D008756 1.9e-35 153.7 253 41.9
Gohir.A08G144500 Gossypium hirsutum HOM05D006916 ORTHO05D008756 3.2e-35 152.9 256 40.6
Potri.001G267200 Populus trichocarpa HOM05D006916 ORTHO05D008756 4.1e-35 152.5 237 45.1
MD02G1312000 Malus domestica HOM05D006916 ORTHO05D008756 7.0e-35 151.8 247 42.5
CiPaw.13G004800 Carya illinoinensis HOM05D006916 ORTHO05D008756 9.2e-35 151.4 244 43.0
DCAR_022403 Daucus carota HOM05D006916 ORTHO05D008756 1.2e-34 151.0 234 45.3
Potri.009G061300 Populus trichocarpa HOM05D006916 ORTHO05D008756 1.2e-34 151.0 242 42.6
Sabra09G0045200 Salix brachista HOM05D006916 ORTHO05D008756 1.2e-34 151.0 245 42.0
TAR633G2279 Trochodendron aralioides HOM05D006916 ORTHO05D008756 1.2e-34 151.0 237 43.0
Dinv43446 Davidia involucrata HOM05D006916 ORTHO05D008756 1.6e-34 150.6 174 50.0
Sopen01g034200 Solanum pennellii HOM05D006916 ORTHO05D008756 2.0e-34 150.2 261 39.5
FvH4_7g01030 Fragaria vesca HOM05D006916 ORTHO05D008756 2.7e-34 149.8 251 43.0
RcHm_v2.0_Chr1g0315961 Rosa chinensis HOM05D006916 ORTHO05D008756 3.5e-34 149.4 251 43.0
TAR633G2378 Trochodendron aralioides HOM05D006916 ORTHO05D008756 3.5e-34 149.4 237 43.0
Eucgr.J01277 Eucalyptus grandis HOM05D006916 ORTHO05D008756 3.9e-33 146.0 226 44.2
FAN06G2642 Fragaria x ananassa HOM05D006916 ORTHO05D008756 6.6e-33 145.2 254 42.5
Solyc01g087140.4 Solanum lycopersicum HOM05D006916 ORTHO05D008756 8.6e-33 144.8 262 38.5
Duzib268G1492 Durio zibethinus HOM05D006916 ORTHO05D008756 1.1e-32 144.4 261 42.1
FAN01G0033 Fragaria x ananassa HOM05D006916 ORTHO05D008756 1.5e-32 144.1 254 41.3
Nn7g36196 Nelumbo nucifera HOM05D006916 ORTHO05D008756 1.5e-32 144.1 239 43.1
Lsat_1_v5_gn_1_107281 Lactuca sativa HOM05D006916 ORTHO05D008756 5.6e-32 142.1 241 39.0
Cfa010762 Carpinus fangiana HOM05D006916 ORTHO05D008756 7.3e-32 141.7 259 39.4
Haze_03209 Corylus avellana HOM05D006916 ORTHO05D008756 1.2e-31 141.0 251 42.2
FAN03G0110 Fragaria x ananassa HOM05D006916 ORTHO05D008756 2.1e-31 140.2 254 40.9
MD07G1010600 Malus domestica HOM05D006916 ORTHO05D008756 3.6e-31 139.4 251 41.0
QL04p006637 Quercus lobata HOM05D006916 ORTHO05D008756 1.1e-30 137.9 254 40.2
CsaV3_3G032160 Cucumis sativus L. HOM05D006916 ORTHO05D008756 2.3e-30 136.7 257 39.7
THA.LOC104819073 Tarenaya hassleriana HOM05D006916 ORTHO05D008756 2.3e-30 136.7 108 58.3
Cpa.g.sc640.2 Carica papaya HOM05D006916 ORTHO05D008756 3.1e-30 136.3 244 41.0
ECA248G0998 Erigeron canadensis HOM05D006916 ORTHO05D008756 3.1e-30 136.3 227 39.2
CANSAT80G1950 Cannabis sativa HOM05D006916 ORTHO05D008756 4.0e-30 136.0 108 58.3
PGSC0003DMG400006867 Solanum tuberosum HOM05D006916 ORTHO05D008756 4.0e-30 136.0 257 38.1
Nitab4.5_0001186g0060 Nicotiana tabacum HOM05D006916 ORTHO05D008756 1.2e-29 134.4 260 39.2
PGR044G2091 Punica granatum HOM05D006916 ORTHO05D008756 5.8e-29 132.1 256 39.5
Atru.chr11.2661 Acer truncatum HOM05D000807 ORTHO05D000662 7.5e-29 131.7 267 37.5
MELO3C023975.2 Cucumis melo HOM05D006916 ORTHO05D008756 7.5e-29 131.7 251 39.4
GSVIVG01032090001 Vitis vinifera HOM05D006916 ORTHO05D008756 7.5e-29 131.7 247 40.9
Peaxi162Scf00428g00116 Petunia axillaris HOM05D006916 ORTHO05D008756 1.3e-28 131.0 260 37.7
Lj3g0001567 Lotus japonicus HOM05D006916 ORTHO05D008756 1.7e-28 130.6 108 57.4
Ciclev10031819m.g Citrus clementina HOM05D006916 ORTHO05D008756 3.7e-28 129.4 276 37.7
TPR.G14555 Trifolium pratense HOM05D006916 ORTHO05D008756 6.4e-28 128.6 228 41.2
TWI73G0045 Tripterygium wilfordii HOM05D006916 ORTHO05D008756 1.1e-27 127.9 108 55.6
Nitab4.5_0000634g0200 Nicotiana tabacum HOM05D006916 ORTHO05D008756 1.4e-27 127.5 265 37.7
Aqoxy1G00267 Aquilegia oxysepala HOM05D006916 ORTHO05D008756 3.2e-27 126.3 261 37.5
Psat5g212080 Pisum sativum HOM05D006916 ORTHO05D008756 3.2e-27 126.3 242 38.0
Migut.B01296 Erythranthe guttata HOM05D006916 ORTHO05D008756 5.4e-27 125.6 61 98.4
Glyma.15G274400 Glycine max HOM05D006916 ORTHO05D008756 5.4e-27 125.6 255 37.6
CSS0039404 Camellia sinensis var. sinensis HOM05D006916 ORTHO05D008756 7.1e-27 125.2 98 61.2
Sed0016369 Sechium edule HOM05D006916 ORTHO05D008756 1.2e-26 124.4 243 38.7
AUR62009383 Chenopodium quinoa HOM05D006916 ORTHO05D008756 2.1e-26 123.6 109 53.2
VMungo1080G1111 Vigna mungo HOM05D006916 ORTHO05D008756 2.7e-26 123.2 226 37.6
Medtr3g033530 Medicago truncatula HOM05D006916 ORTHO05D008756 4.6e-26 122.5 246 37.8
CARHR082790 Cardamine hirsuta HOM05D006916 ORTHO05D008756 7.8e-26 121.7 114 52.6
Ca_14513_v3 Cicer arietinum L. HOM05D006916 ORTHO05D008756 7.8e-26 121.7 246 37.8
AT3G08490 Arabidopsis thaliana HOM05D006916 ORTHO05D008756 1.3e-25 120.9 125 52.0
Lalb_Chr20g0108041 Lupinus albus HOM05D006916 ORTHO05D008756 1.3e-25 120.9 254 34.6
Phvul.005G021800 Phaseolus vulgaris HOM05D006916 ORTHO05D008756 1.7e-25 120.6 218 37.6
arahy.Tifrunner.gnm1.ann1.P93ESD Arachis hypogaea HOM05D006916 ORTHO05D008756 5.1e-25 119.0 231 36.8
arahy.Tifrunner.gnm1.ann1.5BB2HR Arachis hypogaea HOM05D006916 ORTHO05D008756 6.6e-25 118.6 231 36.8
Sp3g06960 Schrenkiella parvula HOM05D006916 ORTHO05D008756 6.6e-25 118.6 99 56.6
ClCG10G012380 Citrullus lanatus HOM05D006916 ORTHO05D008756 1.1e-24 117.9 247 36.4
HanXRQChr01g0016271 Helianthus annuus HOM05D006916 ORTHO05D008756 1.1e-24 117.9 243 33.7
PSO384G3304 Papaver somniferum HOM05D006916 ORTHO05D008756 1.1e-24 117.9 260 35.0
Sc11g0009180 Simmondsia chinensis HOM05D006916 ORTHO05D008756 1.5e-24 117.5 226 38.1
BcaC09g47975 Brassica carinata HOM05D006916 ORTHO05D008756 3.6e-23 112.8 109 54.1
Carub.0003s0763 Capsella rubella HOM05D006916 ORTHO05D008756 4.7e-23 112.5 199 39.7
Thhalv10022398m.g Eutrema salsugineum HOM05D006916 ORTHO05D008756 6.2e-23 112.1 98 54.1
BcaC05g29589 Brassica carinata HOM05D006916 ORTHO05D008756 3.1e-22 109.8 108 50.9
A05p40250 Brassica napus HOM05D006916 ORTHO05D008756 3.1e-22 109.8 108 50.0
C05p59330 Brassica napus HOM05D006916 ORTHO05D008756 3.1e-22 109.8 108 50.0
Sc11g0009190 Simmondsia chinensis HOM05D006916 ORTHO05D008756 5.2e-22 109.0 199 33.7
BcaB04g21256 Brassica carinata HOM05D006916 ORTHO05D008756 8.9e-22 108.2 194 39.7
BolC5t34565H Brassica oleracea HOM05D006916 ORTHO05D008756 8.9e-22 108.2 108 49.1
BraA01t04344Z Brassica rapa HOM05D006916 ORTHO05D008756 1.2e-21 107.8 98 55.1
Hund16628 Selenicereus undatus HOM05D006916 ORTHO05D008756 4.4e-21 105.9 110 48.2
Ciclev10032915m.g Citrus clementina HOM05D006916 ORTHO05D008756 5.8e-21 105.5 74 63.5
Os03g0216500 Oryza sativa ssp. japonica HOM05D006916 ORTHO05D008756 7.6e-21 105.1 166 38.0
BolC1t05505H Brassica oleracea HOM05D006916 ORTHO05D008756 2.2e-20 103.6 194 38.7
Zm00001eb008770 Zea mays HOM05D006916 ORTHO05D008756 9.2e-19 98.2 244 33.2
PSO339G1248 Papaver somniferum HOM05D006916 ORTHO05D008756 1.9e-16 90.5 258 31.4
HPP92_026854 Vanilla planifolia HOM05D006916 ORTHO05D008756 3.3e-16 89.7 93 43.0
AUR62023064 Chenopodium quinoa HOM05D006916 ORTHO05D008756 7.1e-11 72.0 307 25.1
SEGI_01223 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 7.1e-11 72.0 103 35.9
AL3G19450 Arabidopsis lyrata HOM05D006916 ORTHO05D008756 2.3e-09 67.0 49 63.3
SEGI_13769 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 6.6e-09 65.5 188 30.3
MBI04_g19160_MAGBIO Magnolia biondii HOM05D000939 ORTHO05D000745 7.3e-08 62.0 85 34.1
EL10Ac2g04327 Beta vulgaris HOM05D006916 ORTHO05D008756 2.1e-07 60.5 63 42.9
Glyma.09G192300 Glycine max HOM05D000939 ORTHO05D000745 8.1e-07 58.5 226 28.3
ATR0605G233 Amborella trichopoda HOM05D006916 ORTHO05D008756 1.4e-06 57.8 165 32.7
CSS0009205 Camellia sinensis var. sinensis HOM05D000939 ORTHO05D000745 2.4e-06 57.0 82 34.1
CSS0020877 Camellia sinensis var. sinensis HOM05D000939 ORTHO05D000745 2.4e-06 57.0 82 34.1
Mapoly0003s0293 Marchantia polymorpha HOM05D000939 ORTHO05D000745 2.4e-06 57.0 183 28.4
Nitab4.5_0000097g0170 Nicotiana tabacum HOM05D000939 ORTHO05D000745 2.4e-06 57.0 192 24.0
Nitab4.5_0008909g0030 Nicotiana tabacum HOM05D000939 ORTHO05D000745 2.4e-06 57.0 192 24.5
TAR626G1084 Trochodendron aralioides HOM05D000939 ORTHO05D000745 3.1e-06 56.6 85 32.9
Zm00001eb375730 Zea mays HOM05D000939 ORTHO05D000745 3.1e-06 56.6 109 30.3


User provided reference genes

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