Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 5.4e-83 310.8 147 100.0
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 7.9e-82 307.0 147 97.3
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 1.0e-60 236.9 139 78.4
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 2.5e-59 232.3 142 72.5
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 3.0e-57 225.3 142 72.5
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 6.7e-57 224.2 146 69.9
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 8.8e-57 223.8 138 72.5
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 1.1e-56 223.4 146 71.2
PGSC0003DMG400005454 Solanum tuberosum HOM05D005641 ORTHO05D007953 1.1e-56 223.4 142 70.4
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 1.5e-56 223.0 146 71.2
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 1.9e-56 222.6 144 70.1
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 1.9e-56 222.6 145 72.4
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 5.7e-56 221.1 144 71.5
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 7.4e-56 220.7 145 71.0
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 9.7e-56 220.3 151 70.2
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 1.3e-55 219.9 144 70.1
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 1.3e-55 219.9 140 69.3
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 2.8e-55 218.8 151 69.5
Sopen10g020870 Solanum pennellii HOM05D005641 ORTHO05D007953 2.8e-55 218.8 140 70.0
Nitab4.5_0012285g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 3.7e-55 218.4 142 67.6
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 4.8e-55 218.0 145 69.7
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 4.8e-55 218.0 146 71.2
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 1.4e-54 216.5 139 71.9
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.8e-54 216.1 147 68.7
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 2.4e-54 215.7 119 79.0
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 3.1e-54 215.3 139 71.9
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 3.1e-54 215.3 143 69.9
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 4.1e-54 214.9 147 68.0
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 6.9e-54 214.2 127 74.8
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 9.1e-54 213.8 141 68.8
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 9.1e-54 213.8 144 69.4
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.2e-53 213.4 142 71.1
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.2e-53 213.4 136 72.8
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 1.2e-53 213.4 144 68.8
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 1.5e-53 213.0 145 68.3
CAN.G1.68 Capsicum annuum HOM05D005641 ORTHO05D007953 2.0e-53 212.6 142 66.9
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 2.0e-53 212.6 145 68.3
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 2.0e-53 212.6 142 69.7
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 3.4e-53 211.8 143 69.2
Solyc10g049650.3 Solanum lycopersicum HOM05D005641 ORTHO05D007953 4.5e-53 211.5 140 67.9
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 5.9e-53 211.1 148 66.9
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 7.7e-53 210.7 124 76.6
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 7.7e-53 210.7 120 78.3
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 1.3e-52 209.9 124 73.4
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 1.7e-52 209.5 146 67.1
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 3.8e-52 208.4 146 66.4
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 5.0e-52 208.0 146 65.8
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 6.5e-52 207.6 127 71.7
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 8.5e-52 207.2 142 66.2
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 8.5e-52 207.2 121 74.4
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 1.4e-51 206.5 148 67.6
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 1.9e-51 206.1 148 67.6
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 1.9e-51 206.1 120 72.5
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 3.2e-51 205.3 146 65.1
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 3.2e-51 205.3 139 70.5
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 4.2e-51 204.9 127 70.9
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 5.5e-51 204.5 141 68.1
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 5.5e-51 204.5 146 64.4
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 2.1e-50 202.6 145 64.1
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 2.7e-50 202.2 146 67.1
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 2.7e-50 202.2 135 68.9
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 6.1e-50 201.1 138 67.4
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 1.0e-49 200.3 147 67.3
Nitab4.5_0001259g0120 Nicotiana tabacum HOM05D005641 ORTHO05D007953 1.4e-49 199.9 135 65.9
Peaxi162Scf00083g00163 Petunia axillaris HOM05D005641 ORTHO05D007953 1.4e-49 199.9 137 65.7
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.8e-49 199.5 146 65.8
Duzib052G0024 Durio zibethinus HOM05D005641 ORTHO05D007953 2.3e-49 199.1 149 62.4
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 2.3e-49 199.1 137 68.6
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 2.3e-49 199.1 143 65.7
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 3.0e-49 198.7 141 66.0
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 3.0e-49 198.7 137 69.3
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 3.9e-49 198.4 136 67.6
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 5.1e-49 198.0 141 65.2
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 5.1e-49 198.0 145 63.4
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 8.8e-49 197.2 137 64.2
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 8.8e-49 197.2 135 66.7
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 1.5e-48 196.4 141 65.2
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 1.5e-48 196.4 141 65.2
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 1.5e-48 196.4 138 64.5
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 2.0e-48 196.1 139 65.5
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 2.6e-48 195.7 136 66.2
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 3.3e-48 195.3 141 65.2
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 5.7e-48 194.5 136 66.9
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 7.4e-48 194.1 146 65.8
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 9.7e-48 193.7 116 76.7
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 2.8e-47 192.2 145 64.8
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 1.4e-46 189.9 151 60.9
Zm00001eb137960 Zea mays HOM05D005641 ORTHO05D007953 9.1e-46 187.2 126 65.9
Os12g0508266 Oryza sativa ssp. japonica HOM05D005641 ORTHO05D007953 2.6e-45 185.7 126 64.3
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 2.6e-45 185.7 148 60.8
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 2.6e-45 185.7 148 60.8
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 5.9e-45 184.5 145 60.0
Hund12610 Selenicereus undatus HOM05D005641 ORTHO05D007953 7.7e-45 184.1 130 63.1
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 8.5e-44 180.6 146 58.9
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 3.2e-43 178.7 146 59.6
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 9.4e-43 177.2 164 54.3
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 1.2e-42 176.8 136 57.4
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 6.1e-42 174.5 140 63.6
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-41 173.3 109 68.8
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 1.3e-39 166.8 142 60.6
SalBow3G4250 Salvia bowleyana HOM05D005641 ORTHO05D007953 1.8e-38 162.9 86 80.2
Pp3c6_20250 Physcomitrium patens HOM05D005641 ORTHO05D007953 2.6e-32 142.5 118 53.4
Ca_24352_v3 Cicer arietinum L. HOM05D005641 ORTHO05D007953 5.7e-32 141.4 80 75.0
SMO119G0506 Selaginella moellendorffii HOM05D005641 ORTHO05D007953 9.7e-32 140.6 117 53.0
arahy.Tifrunner.gnm1.ann1.C5GEYC Arachis hypogaea HOM05D005641 ORTHO05D007953 2.8e-31 139.0 145 56.6
Hma1.2p1_1023F.1_g248900 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 1.3e-28 130.2 75 76.0
Peaxi162Scf00003g02633 Petunia axillaris HOM05D005641 ORTHO05D007953 2.7e-26 122.5 142 46.5
CBR_g32245 Chara braunii HOM05D005641 ORTHO05D007953 3.6e-26 122.1 116 45.7
RcHm_v2.0_Chr6g0253251 Rosa chinensis HOM05D005641 ORTHO05D007953 4.7e-26 121.7 98 53.1
Lj9A326T79 Lonicera japonica HOM05D005641 ORTHO05D007953 2.6e-24 115.9 74 67.6
Psat4g227920 Pisum sativum HOM05D005641 ORTHO05D007953 6.3e-23 111.3 134 45.5
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 4.5e-21 105.1 120 47.5
FvH4_2g04050 Fragaria vesca HOM05D005641 ORTHO05D035713 4.5e-21 105.1 90 52.2
RcHm_v2.0_Chr6g0253401 Rosa chinensis HOM05D005641 ORTHO05D035713 1.0e-20 104.0 90 51.1
Lj9A326T80 Lonicera japonica HOM05D005641 ORTHO05D007953 5.0e-20 101.7 60 70.0
Prupe.8G141500 Prunus persica HOM05D005641 ORTHO05D007953 2.5e-19 99.4 89 47.2
RcHm_v2.0_Chr6g0253291 Rosa chinensis HOM05D005641 ORTHO05D007953 5.5e-19 98.2 93 44.1
RcHm_v2.0_Chr6g0253371 Rosa chinensis HOM05D001615 ORTHO05D001493 4.4e-16 88.6 99 43.4
RcHm_v2.0_Chr6g0253261 Rosa chinensis HOM05D005641 ORTHO05D007953 1.8e-14 83.2 92 43.5
RcHm_v2.0_Chr6g0253341 Rosa chinensis HOM05D005641 ORTHO05D007953 5.4e-14 81.6 99 37.4
Lalb_Chr16g0376281 Lupinus albus HOM05D005641 ORTHO05D007953 6.6e-12 74.7 56 62.5
Nitab4.5_0007768g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 1.9e-11 73.2 61 55.7
RcHm_v2.0_Chr6g0253281 Rosa chinensis HOM05D005641 ORTHO05D007953 2.8e-10 69.3 67 47.8
Zm00001eb264710 Zea mays HOM05D005641 ORTHO05D007953 8.9e-09 64.3 61 54.1
Nitab4.5_0013410g0010 Nicotiana tabacum HOM05D005641 ORTHO05D007953 4.4e-08 62.0 61 50.8
Cfa004644 Carpinus fangiana HOM05D005641 ORTHO05D002074 2.9e-07 59.3 39 66.7
FAN24G2128 Fragaria x ananassa HOM05D005641 ORTHO05D208318 4.1e-06 55.5 64 40.6
Nitab4.5_0003335g0050 Nicotiana tabacum HOM05D002499 ORTHO05D002812 9.2e-06 54.3 61 36.1


User provided reference genes

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