Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00657 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.1e-47 192.2 107 100.0
Migut.G01101 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.1e-47 192.2 107 100.0
Migut.O00629 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.1e-47 192.2 107 100.0
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 5.8e-26 120.9 136 61.0
Migut.G00827 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.4e-24 115.5 142 61.3
Migut.G01155 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.6e-23 112.8 139 59.0
Migut.G00825 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.7e-23 112.1 164 53.0
Migut.G01100 Erythranthe guttata HOM05D008132 ORTHO05D005763 7.4e-21 104.0 120 60.0
Migut.G01099 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.5e-18 96.3 158 48.1
MSTRG.4386 Avicennia marina HOM05D008132 ORTHO05D005763 3.0e-14 82.0 112 46.4
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 1.5e-13 79.7 129 47.3
Oeu022673.1 Olea europaea HOM05D008132 ORTHO05D005763 1.8e-11 72.8 158 41.8
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 2.4e-11 72.4 134 46.3
CiPaw.03G275800 Carya illinoinensis HOM05D052008 ORTHO05D005763 4.0e-11 71.6 111 45.9
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 2.0e-10 69.3 115 51.3
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 2.0e-10 69.3 115 51.3
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 2.6e-10 68.9 136 42.6
MSTRG.9644 Avicennia marina HOM05D008132 ORTHO05D005763 4.5e-10 68.2 137 38.7
MSTRG.9649 Avicennia marina HOM05D008132 ORTHO05D005763 5.8e-10 67.8 118 44.9
MSTRG.9648 Avicennia marina HOM05D008132 ORTHO05D005763 1.0e-09 67.0 111 48.6
Cc00_g35190 Coffea canephora HOM05D008132 ORTHO05D005763 6.5e-09 64.3 72 59.7
MSTRG.4268 Avicennia marina HOM05D008132 ORTHO05D005763 8.4e-09 63.9 138 41.3
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 1.1e-08 63.5 122 42.6
Nn1g09275 Nelumbo nucifera HOM05D008132 ORTHO05D005763 1.1e-08 63.5 135 43.7
Actinidia09763 Actinidia chinensis HOM05D008132 ORTHO05D005763 1.4e-08 63.2 149 38.9
Thecc.01G186700 Theobroma cacao HOM05D008132 ORTHO05D005763 2.5e-08 62.4 120 42.5
MD09G1118600 Malus domestica HOM05D008132 ORTHO05D005763 3.2e-08 62.0 124 45.2
COL.COLO4_04943 Corchorus olitorius HOM05D008132 ORTHO05D005763 5.5e-08 61.2 124 41.9
Thecc.01G236900 Theobroma cacao HOM05D008132 ORTHO05D005763 9.3e-08 60.5 130 40.0
MD09G1118100 Malus domestica HOM05D008132 ORTHO05D005763 2.1e-07 59.3 124 46.0
PGR042G0640 Punica granatum HOM05D008132 ORTHO05D005763 2.1e-07 59.3 115 47.8
Gorai.006G083000 Gossypium raimondii HOM05D008132 ORTHO05D005763 3.5e-07 58.5 134 39.6
PGR042G2058 Punica granatum HOM05D008132 ORTHO05D005763 4.6e-07 58.2 127 44.9
GSVIVG01030407001 Vitis vinifera HOM05D008132 ORTHO05D005763 4.6e-07 58.2 167 37.1
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 1.3e-06 56.6 132 42.4
CsaV3_7G002960 Cucumis sativus L. HOM05D016168 ORTHO05D005763 1.8e-06 56.2 120 47.5
Nitab4.5_0000037g0280 Nicotiana tabacum HOM05D008132 ORTHO05D005763 1.8e-06 56.2 112 42.0
SGA_v2.0_scaffold308G48098 Striga asiatica HOM05D002768 ORTHO05D002993 1.8e-06 56.2 86 58.1
ClCG02G002460 Citrullus lanatus HOM05D016168 ORTHO05D005763 2.3e-06 55.8 124 47.6
Gohir.A07G085700 Gossypium hirsutum HOM05D008132 ORTHO05D005763 2.3e-06 55.8 118 43.2
CANSAT64G2794 Cannabis sativa HOM05D008132 ORTHO05D005763 3.9e-06 55.1 122 38.5
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 5.1e-06 54.7 131 43.5
Eucgr.A01080 Eucalyptus grandis HOM05D008132 ORTHO05D005763 6.7e-06 54.3 141 36.2
Glyma.20G011500 Glycine max HOM05D021502 ORTHO05D005763 8.7e-06 53.9 107 37.4
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 8.7e-06 53.9 133 36.8
Nitab4.5_0000037g0290 Nicotiana tabacum HOM05D008132 ORTHO05D005763 8.7e-06 53.9 111 40.5
Prupe.3G205800 Prunus persica HOM05D008132 ORTHO05D005763 8.7e-06 53.9 117 45.3


User provided reference genes

Program Settings