Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00622 Erythranthe guttata HOM05D003182 ORTHO05D189880 6.5e-102 374.0 183 100.0
DCAR_011207 Daucus carota HOM05D003182 ORTHO05D003829 3.8e-25 119.0 185 42.2
Dinv35057 Davidia involucrata HOM05D003182 ORTHO05D003829 3.8e-25 119.0 187 41.7
CSS0022412 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 4.9e-25 118.6 187 40.6
Rhsim08G0055300 Rhododendron simsii HOM05D003182 ORTHO05D003829 1.9e-24 116.7 186 40.3
Prupe.3G283700 Prunus persica HOM05D003182 ORTHO05D003829 2.4e-24 116.3 185 38.4
Actinidia35739 Actinidia chinensis HOM05D003182 ORTHO05D003829 4.2e-24 115.5 188 38.3
Haze_14666 Corylus avellana HOM05D003182 ORTHO05D003829 7.1e-24 114.8 191 40.3
Nitab4.5_0003337g0070 Nicotiana tabacum HOM05D003182 ORTHO05D003829 7.1e-24 114.8 186 41.4
Oeu018700.3 Olea europaea HOM05D003182 ORTHO05D003829 7.1e-24 114.8 186 42.5
SGA_v2.0_scaffold205G41704 Striga asiatica HOM05D003182 ORTHO05D003829 1.6e-23 113.6 188 39.9
Eucgr.J02205 Eucalyptus grandis HOM05D003182 ORTHO05D003829 2.7e-23 112.8 187 40.6
Migut.O00621 Erythranthe guttata HOM05D003182 ORTHO05D189614 3.5e-23 112.5 61 90.2
PGR083G0239 Punica granatum HOM05D003182 ORTHO05D003829 3.5e-23 112.5 185 38.9
TAR622G1170 Trochodendron aralioides HOM05D003182 ORTHO05D003829 3.5e-23 112.5 185 41.6
Migut.H00124 Erythranthe guttata HOM05D003182 ORTHO05D003829 4.6e-23 112.1 188 39.4
COL.COLO4_28945 Corchorus olitorius HOM05D003182 ORTHO05D003829 6.0e-23 111.7 187 37.4
vmacro18240 Vaccinium macrocarpon HOM05D003182 ORTHO05D003829 7.9e-23 111.3 189 37.0
GSVIVG01032486001 Vitis vinifera HOM05D003182 ORTHO05D003829 1.0e-22 110.9 185 38.4
MBI16_g36058_MAGBIO Magnolia biondii HOM05D003182 ORTHO05D003829 1.3e-22 110.5 188 41.0
Peaxi162Scf00129g01034 Petunia axillaris HOM05D003182 ORTHO05D003829 1.3e-22 110.5 186 38.7
Solyc02g086900.4 Solanum lycopersicum HOM05D003182 ORTHO05D003829 1.3e-22 110.5 186 41.4
Sopen02g031670 Solanum pennellii HOM05D003182 ORTHO05D003829 1.3e-22 110.5 186 41.4
SGA_v2.0_scaffold135G34859 Striga asiatica HOM05D003182 ORTHO05D003829 1.3e-22 110.5 179 40.2
Cc07_g02310 Coffea canephora HOM05D003182 ORTHO05D003829 2.3e-22 109.8 185 41.1
FAN02G2729 Fragaria x ananassa HOM05D003182 ORTHO05D003829 2.3e-22 109.8 187 38.0
MD09G1034800 Malus domestica HOM05D003182 ORTHO05D003829 2.3e-22 109.8 185 39.5
CAN.G206.33 Capsicum annuum HOM05D003182 ORTHO05D003829 5.1e-22 108.6 186 39.8
FAN09G2145 Fragaria x ananassa HOM05D003182 ORTHO05D003829 5.1e-22 108.6 187 38.5
Lalb_Chr02g0160081 Lupinus albus HOM05D003182 ORTHO05D003829 5.1e-22 108.6 185 39.5
Nitab4.5_0005176g0070 Nicotiana tabacum HOM05D003182 ORTHO05D003829 5.1e-22 108.6 211 37.0
CiPaw.03G037600 Carya illinoinensis HOM05D003182 ORTHO05D003829 6.7e-22 108.2 188 36.7
Migut.D00177 Erythranthe guttata HOM05D003182 ORTHO05D189300 6.7e-22 108.2 59 89.8
Lj2g0017775 Lotus japonicus HOM05D003182 ORTHO05D003829 6.7e-22 108.2 185 40.5
FAN14G0389 Fragaria x ananassa HOM05D003182 ORTHO05D003829 8.7e-22 107.8 187 36.9
FAN14G5751 Fragaria x ananassa HOM05D003182 ORTHO05D003829 8.7e-22 107.8 187 36.9
Lalb_Chr02g0160261 Lupinus albus HOM05D003182 ORTHO05D003829 1.1e-21 107.5 185 37.8
FvH4_6g50610 Fragaria vesca HOM05D003182 ORTHO05D003829 1.5e-21 107.1 187 38.0
RcHm_v2.0_Chr2g0171401 Rosa chinensis HOM05D003182 ORTHO05D003829 1.9e-21 106.7 187 36.9
Duzib147G1033 Durio zibethinus HOM05D003182 ORTHO05D003829 3.3e-21 105.9 185 38.9
Manes.15G182900 Manihot esculenta HOM05D003182 ORTHO05D003829 3.3e-21 105.9 185 37.8
Phvul.004G016800 Phaseolus vulgaris HOM05D003182 ORTHO05D003829 3.3e-21 105.9 185 38.9
FAN05G3372 Fragaria x ananassa HOM05D003182 ORTHO05D003829 4.3e-21 105.5 187 37.4
Glyma.19G009400 Glycine max HOM05D003182 ORTHO05D003829 4.3e-21 105.5 185 39.5
QL02p076707 Quercus lobata HOM05D003182 ORTHO05D003829 4.3e-21 105.5 185 38.9
Ciclev10017499m.g Citrus clementina HOM05D003182 ORTHO05D003829 5.6e-21 105.1 186 38.2
Medtr6g007210 Medicago truncatula HOM05D003182 ORTHO05D003829 5.6e-21 105.1 185 38.9
Glyma.13G169200 Glycine max HOM05D003182 ORTHO05D003829 7.4e-21 104.8 185 38.9
Migut.L01410 Erythranthe guttata HOM05D003182 ORTHO05D003829 9.6e-21 104.4 188 37.8
ATR0730G138 Amborella trichopoda HOM05D003182 ORTHO05D003829 1.3e-20 104.0 190 39.5
Sc16g0005420 Simmondsia chinensis HOM05D003182 ORTHO05D003829 1.3e-20 104.0 185 38.9
CsaV3_3G042400 Cucumis sativus L. HOM05D003182 ORTHO05D003829 1.6e-20 103.6 187 35.8
arahy.Tifrunner.gnm1.ann1.5NVD8S Arachis hypogaea HOM05D003182 ORTHO05D003829 2.1e-20 103.2 190 36.8
unitig_62.g23158 Utricularia gibba HOM05D003182 ORTHO05D003829 2.1e-20 103.2 187 36.4
THA.LOC104805399 Tarenaya hassleriana HOM05D003182 ORTHO05D003829 2.8e-20 102.8 186 39.2
unitig_8.g3167 Utricularia gibba HOM05D003182 ORTHO05D003829 2.8e-20 102.8 188 37.8
Gohir.A11G067400 Gossypium hirsutum HOM05D003182 ORTHO05D003829 3.7e-20 102.4 185 35.7
Sed0022900 Sechium edule HOM05D003182 ORTHO05D003829 3.7e-20 102.4 187 34.2
Potri.009G147800 Populus trichocarpa HOM05D003182 ORTHO05D003829 4.8e-20 102.1 187 36.9
Cpa.g.sc39.93 Carica papaya HOM05D003182 ORTHO05D003829 6.2e-20 101.7 187 35.8
arahy.Tifrunner.gnm1.ann1.L7KCN6 Arachis hypogaea HOM05D003182 ORTHO05D003829 8.2e-20 101.3 197 35.5
TWI56G0688 Tripterygium wilfordii HOM05D003182 ORTHO05D003829 8.2e-20 101.3 190 36.8
VMungo0464G0504 Vigna mungo HOM05D003182 ORTHO05D003829 8.2e-20 101.3 186 36.6
Thhalv10027741m.g Eutrema salsugineum HOM05D003182 ORTHO05D003829 1.8e-19 100.1 188 35.6
GSVIVG01020236001 Vitis vinifera HOM05D003182 ORTHO05D003829 1.8e-19 100.1 185 34.6
CANSAT64G2540 Cannabis sativa HOM05D003182 ORTHO05D003829 2.4e-19 99.8 187 35.8
Thecc.02G248300 Theobroma cacao HOM05D003182 ORTHO05D003829 3.1e-19 99.4 193 38.9
TPR.G2315 Trifolium pratense HOM05D003182 ORTHO05D003829 3.1e-19 99.4 185 37.8
Cpa.g.sc69.27 Carica papaya HOM05D003182 ORTHO05D003829 4.0e-19 99.0 185 35.1
Gohir.D11G071300 Gossypium hirsutum HOM05D003182 ORTHO05D003829 4.0e-19 99.0 187 34.2
Gorai.007G076600 Gossypium raimondii HOM05D003182 ORTHO05D003829 4.0e-19 99.0 187 34.2
Sp7g01670 Schrenkiella parvula HOM05D003182 ORTHO05D003829 4.0e-19 99.0 185 35.7
AT5G40270 Arabidopsis thaliana HOM05D003182 ORTHO05D003829 5.3e-19 98.6 186 35.5
A04p13190 Brassica napus HOM05D003182 ORTHO05D003829 5.3e-19 98.6 185 35.7
C04p46940 Brassica napus HOM05D003182 ORTHO05D003829 5.3e-19 98.6 185 35.7
BolC4t26288H Brassica oleracea HOM05D003182 ORTHO05D003829 5.3e-19 98.6 185 35.7
BraA04t16978Z Brassica rapa HOM05D003182 ORTHO05D003829 5.3e-19 98.6 185 35.7
Dinv15303 Davidia involucrata HOM05D003182 ORTHO05D003829 5.3e-19 98.6 185 36.8
Carub.0007s3536 Capsella rubella HOM05D003182 ORTHO05D003829 6.9e-19 98.2 186 35.5
MELO3C009954.2 Cucumis melo HOM05D003182 ORTHO05D003829 6.9e-19 98.2 186 36.6
Oeu003450.3 Olea europaea HOM05D003182 ORTHO05D003829 6.9e-19 98.2 209 33.0
Lj3C1051T18 Lonicera japonica HOM05D003182 ORTHO05D003829 9.0e-19 97.8 193 35.8
Cc11_g14640 Coffea canephora HOM05D003182 ORTHO05D003829 1.2e-18 97.4 189 37.6
Sabra09G0114000 Salix brachista HOM05D003182 ORTHO05D003829 2.6e-18 96.3 187 34.8
Sabra09G0116500 Salix brachista HOM05D003182 ORTHO05D003829 2.6e-18 96.3 187 34.8
SalBow2G3598 Salvia bowleyana HOM05D003182 ORTHO05D003829 2.6e-18 96.3 192 34.9
AL7G49710 Arabidopsis lyrata HOM05D003182 ORTHO05D003829 4.5e-18 95.5 185 34.1
Nitab4.5_0001631g0010 Nicotiana tabacum HOM05D003182 ORTHO05D003829 4.5e-18 95.5 192 32.8
Hund25344 Selenicereus undatus HOM05D003182 ORTHO05D003829 4.5e-18 95.5 194 34.5
Actinidia08167 Actinidia chinensis HOM05D003182 ORTHO05D003829 1.0e-17 94.4 190 34.2
CARHR261820 Cardamine hirsuta HOM05D003182 ORTHO05D003829 1.0e-17 94.4 185 34.1
Gohir.A03G140101 Gossypium hirsutum HOM05D003182 ORTHO05D003829 1.0e-17 94.4 189 34.9
PGSC0003DMG402000497 Solanum tuberosum HOM05D003182 ORTHO05D003829 1.0e-17 94.4 247 32.4
AUR62005374 Chenopodium quinoa HOM05D003182 ORTHO05D003829 1.3e-17 94.0 188 36.7
Nitab4.5_0000113g0300 Nicotiana tabacum HOM05D003182 ORTHO05D003829 1.3e-17 94.0 189 33.3
Sabra08G0144400 Salix brachista HOM05D003182 ORTHO05D003829 1.3e-17 94.0 193 36.3
EL10Ac4g08569 Beta vulgaris HOM05D003182 ORTHO05D003829 1.7e-17 93.6 188 36.2
SGA_v2.0_scaffold165G38249 Striga asiatica HOM05D003182 ORTHO05D003829 1.7e-17 93.6 199 32.7
Ah.04g163460 Amaranthus hybridus HOM05D003182 ORTHO05D003829 2.9e-17 92.8 187 34.8
CSS0021280 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 2.9e-17 92.8 189 35.4
Haze_12174 Corylus avellana HOM05D003182 ORTHO05D003829 3.8e-17 92.4 189 34.4
Potri.008G190200 Populus trichocarpa HOM05D003182 ORTHO05D003829 4.9e-17 92.0 188 36.2
Aa31LG9G1350 Aethionema arabicum HOM05D003182 ORTHO05D003829 6.5e-17 91.7 186 33.3
THA.LOC104825287 Tarenaya hassleriana HOM05D003182 ORTHO05D003829 6.5e-17 91.7 224 33.5
Aqoxy3G02981 Aquilegia oxysepala HOM05D003182 ORTHO05D003829 8.4e-17 91.3 214 31.8
Hma1.2p1_0867F.1_g230210 Hydrangea macrophylla HOM05D003182 ORTHO05D003829 8.4e-17 91.3 185 36.8
Nitab4.5_0018380g0010 Nicotiana tabacum HOM05D003182 ORTHO05D003829 8.4e-17 91.3 186 32.8
Peaxi162Scf00338g00024 Petunia axillaris HOM05D003182 ORTHO05D003829 8.4e-17 91.3 186 31.7
AUR62014036 Chenopodium quinoa HOM05D003182 ORTHO05D003829 2.5e-16 89.7 188 35.6
ECA233G4670 Erigeron canadensis HOM05D003182 ORTHO05D003829 2.5e-16 89.7 189 35.4
Hund05992 Selenicereus undatus HOM05D003182 ORTHO05D003829 2.5e-16 89.7 191 36.1
CAN.G376.8 Capsicum annuum HOM05D003182 ORTHO05D003829 4.2e-16 89.0 186 31.2
CiPaw.05G150700 Carya illinoinensis HOM05D003182 ORTHO05D003829 4.2e-16 89.0 186 33.9
Gohir.D02G162900 Gossypium hirsutum HOM05D003182 ORTHO05D003829 4.2e-16 89.0 186 33.9
Gorai.005G182900 Gossypium raimondii HOM05D003182 ORTHO05D003829 4.2e-16 89.0 186 33.9
HanXRQChr12g0368591 Helianthus annuus HOM05D003182 ORTHO05D003829 5.5e-16 88.6 185 34.1
Atru.chr11.2016 Acer truncatum HOM05D003182 ORTHO05D003829 7.1e-16 88.2 189 34.9
Mapoly0016s0133 Marchantia polymorpha HOM05D003182 ORTHO05D003829 7.1e-16 88.2 189 32.8
Psat2g106920 Pisum sativum HOM05D003182 ORTHO05D003829 7.1e-16 88.2 190 31.6
Duzib248G0927 Durio zibethinus HOM05D003182 ORTHO05D003829 9.3e-16 87.8 189 33.9
Oeu043063.1 Olea europaea HOM05D003182 ORTHO05D003829 1.2e-15 87.4 179 35.8
Atru.chr11.2009 Acer truncatum HOM05D003182 ORTHO05D003829 1.6e-15 87.0 190 33.2
Sc11g0001200 Simmondsia chinensis HOM05D003182 ORTHO05D003829 1.6e-15 87.0 188 34.6
SEGI_37434 Sequoiadendron giganteum HOM05D003182 ORTHO05D003829 2.1e-15 86.7 188 34.0
FAN07G1249 Fragaria x ananassa HOM05D003182 ORTHO05D003829 3.5e-15 85.9 185 33.0
Nn3g16899 Nelumbo nucifera HOM05D003182 ORTHO05D003829 4.6e-15 85.5 184 35.3
AT5G40290 Arabidopsis thaliana HOM05D003182 ORTHO05D003829 1.3e-14 84.0 181 31.5
Manes.12G029366 Manihot esculenta HOM05D003182 ORTHO05D003829 1.3e-14 84.0 188 34.0
CSS0050117 Camellia sinensis var. sinensis HOM05D003182 ORTHO05D003829 1.8e-14 83.6 185 31.9
Ca_04599_v3 Cicer arietinum L. HOM05D003182 ORTHO05D003829 2.3e-14 83.2 188 33.0
FAN22G1320 Fragaria x ananassa HOM05D003182 ORTHO05D003829 2.3e-14 83.2 185 31.9
BcaB06g27467 Brassica carinata HOM05D003182 ORTHO05D003829 3.9e-14 82.4 218 29.4
vmacro01182 Vaccinium macrocarpon HOM05D003182 ORTHO05D003829 3.9e-14 82.4 185 31.4
Zm00001eb334290 Zea mays HOM05D003182 ORTHO05D003829 6.7e-14 81.6 187 29.9
EL10Ac6g13670 Beta vulgaris HOM05D003182 ORTHO05D003829 1.5e-13 80.5 189 33.3
FAN12G1714 Fragaria x ananassa HOM05D003182 ORTHO05D003829 1.9e-13 80.1 185 29.7
MD16G1092000 Malus domestica HOM05D003182 ORTHO05D003829 1.9e-13 80.1 187 33.2
Sopen05g001610 Solanum pennellii HOM05D003182 ORTHO05D003829 2.5e-13 79.7 189 29.1
TWI18G0345 Tripterygium wilfordii HOM05D003182 ORTHO05D003829 2.5e-13 79.7 183 30.1
AL7G49680 Arabidopsis lyrata HOM05D003182 ORTHO05D003829 3.3e-13 79.3 177 32.2
arahy.Tifrunner.gnm1.ann1.P43H24 Arachis hypogaea HOM05D003182 ORTHO05D003829 3.3e-13 79.3 198 31.8
FvH4_4g34540 Fragaria vesca HOM05D003182 ORTHO05D003829 4.3e-13 79.0 185 30.8
TAR374G1615 Trochodendron aralioides HOM05D003182 ORTHO05D003829 5.7e-13 78.6 110 48.2
RhsimUnG0091000 Rhododendron simsii HOM05D003182 ORTHO05D003829 7.4e-13 78.2 185 30.3
Ah.02g129910 Amaranthus hybridus HOM05D003182 ORTHO05D003829 9.7e-13 77.8 187 31.6
TPR.G13577 Trifolium pratense HOM05D003182 ORTHO05D003829 9.7e-13 77.8 185 31.4
arahy.Tifrunner.gnm1.ann1.3N6FKX Arachis hypogaea HOM05D003182 ORTHO05D003829 1.6e-12 77.0 189 31.2
Os01g0109300 Oryza sativa ssp. japonica HOM05D003182 ORTHO05D003829 2.2e-12 76.6 185 30.8
Prupe.1G254300 Prunus persica HOM05D003182 ORTHO05D003829 2.2e-12 76.6 190 30.0
RcHm_v2.0_Chr4g0443921 Rosa chinensis HOM05D003182 ORTHO05D003829 2.8e-12 76.3 190 29.5
Ciclev10031446m.g Citrus clementina HOM05D003182 ORTHO05D003829 3.7e-12 75.9 190 33.7
PSO063G3727 Papaver somniferum HOM05D003182 ORTHO05D003829 3.7e-12 75.9 189 32.3
PSO832G1777 Papaver somniferum HOM05D003182 ORTHO05D003829 4.8e-12 75.5 189 32.3
Rhsim12G0047300 Rhododendron simsii HOM05D003182 ORTHO05D003829 4.8e-12 75.5 185 30.8
Medtr5g034420 Medicago truncatula HOM05D003182 ORTHO05D003829 8.2e-12 74.7 187 28.9
MSTRG.24015 Avicennia marina HOM05D003182 ORTHO05D003829 1.8e-11 73.6 50 70.0
Lsat_1_v5_gn_8_157280 Lactuca sativa HOM05D003182 ORTHO05D003829 1.8e-11 73.6 110 46.4
Lalb_Chr05g0228151 Lupinus albus HOM05D003182 ORTHO05D003829 1.8e-11 73.6 189 30.2
DCAR_031100 Daucus carota HOM05D003182 ORTHO05D003829 2.4e-11 73.2 189 28.6
Pp3c17_2920 Physcomitrium patens HOM05D003182 ORTHO05D003829 4.1e-11 72.4 191 29.8
QL03p061347 Quercus lobata HOM05D003182 ORTHO05D003829 5.3e-11 72.0 188 29.3
COL.COLO4_36968 Corchorus olitorius HOM05D003182 ORTHO05D003829 6.9e-11 71.6 189 28.6
Hma1.2p1_0802F.1_g220380 Hydrangea macrophylla HOM05D003182 ORTHO05D003829 3.8e-09 65.9 68 50.0
Thecc.04G008600 Theobroma cacao HOM05D003182 ORTHO05D003829 6.5e-09 65.1 42 71.4
Lju41C35G6 Lonicera japonica HOM05D003182 ORTHO05D003829 8.5e-09 64.7 68 48.5
PGSC0003DMG400030991 Solanum tuberosum HOM05D003182 ORTHO05D003829 8.5e-09 64.7 44 63.6
Actinidia27785 Actinidia chinensis HOM05D003182 ORTHO05D003829 1.1e-08 64.3 141 31.9
arahy.Tifrunner.gnm1.ann1.ZL6HLN Arachis hypogaea HOM05D003182 ORTHO05D003829 1.9e-08 63.5 68 44.1
ClCG10G014240 Citrullus lanatus HOM05D003182 ORTHO05D003829 3.2e-08 62.8 42 66.7
Solyc05g005610.4 Solanum lycopersicum HOM05D003182 ORTHO05D022870 4.2e-08 62.4 104 33.7
Glyma.02G034400 Glycine max HOM05D003182 ORTHO05D003829 1.2e-07 60.8 43 62.8
HPP92_003804 Vanilla planifolia HOM05D003182 ORTHO05D003829 2.7e-07 59.7 70 44.3
PGR119G1400 Punica granatum HOM05D003182 ORTHO05D003829 6.1e-07 58.5 42 64.3
Atru.chr6.2291 Acer truncatum HOM05D003182 ORTHO05D003829 7.9e-07 58.2 63 47.6
DCAR_007091 Daucus carota HOM05D003182 ORTHO05D003829 7.9e-07 58.2 42 64.3
Actinidia01705 Actinidia chinensis HOM05D003182 ORTHO05D003829 3.0e-06 56.2 50 54.0
TAR623G1545 Trochodendron aralioides HOM05D000001 ORTHO05D011287 3.9e-06 55.8 33 78.8
CANSAT01G2334 Cannabis sativa HOM05D003182 ORTHO05D003829 5.1e-06 55.5 43 55.8
QL03p061290 Quercus lobata HOM05D003182 ORTHO05D003829 8.8e-06 54.7 50 50.0


User provided reference genes

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