Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 4.5e-258 894.0 436 100.0
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.3e-244 849.4 440 95.5
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 2.4e-195 685.6 425 77.9
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 2.7e-194 682.2 435 76.8
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.1e-179 633.6 433 70.9
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 3.9e-177 625.2 434 71.2
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 3.3e-176 622.1 418 71.8
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 6.2e-175 617.8 415 69.9
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 5.2e-174 614.8 422 69.4
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.4e-173 612.1 412 70.4
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 3.4e-173 612.1 427 68.1
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 4.4e-173 611.7 412 70.4
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 5.8e-173 611.3 419 69.5
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 2.2e-172 609.4 414 69.3
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 6.4e-172 607.8 437 68.0
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 8.3e-172 607.4 435 68.5
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 3.2e-171 605.5 429 67.6
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 3.2e-171 605.5 420 68.6
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 5.4e-171 604.7 421 67.5
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 7.1e-171 604.4 429 67.8
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 7.1e-171 604.4 439 67.4
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 1.6e-170 603.2 414 70.0
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.7e-170 602.4 432 66.4
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 4.6e-170 601.7 434 66.4
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 4.6e-170 601.7 414 68.6
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 6.0e-170 601.3 443 66.6
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 6.0e-170 601.3 435 67.4
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 7.8e-170 600.9 437 67.0
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 7.8e-170 600.9 420 68.3
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.3e-169 600.1 439 65.1
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.3e-169 600.1 435 66.4
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 1.3e-169 600.1 421 67.9
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.7e-169 599.7 415 68.9
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.7e-169 599.7 432 66.2
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 2.3e-169 599.4 414 68.8
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 3.0e-169 599.0 435 65.3
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 1.1e-168 597.0 433 65.6
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.9e-168 596.3 432 65.3
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.3e-168 595.1 442 65.8
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 9.5e-168 594.0 416 67.5
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.6e-167 593.2 413 69.2
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 1.6e-167 593.2 419 66.3
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 2.8e-167 592.4 411 68.9
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 2.8e-167 592.4 410 67.1
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 6.2e-167 591.3 441 65.3
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 8.1e-167 590.9 448 64.1
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 8.1e-167 590.9 442 65.8
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 1.1e-166 590.5 415 68.4
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 2.4e-166 589.3 432 64.4
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 5.2e-166 588.2 434 64.7
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 8.9e-166 587.4 435 65.7
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 8.9e-166 587.4 410 67.8
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.5e-165 586.6 424 65.8
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 2.6e-165 585.9 437 65.2
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 2.6e-165 585.9 435 65.7
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 5.8e-165 584.7 420 65.0
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 1.7e-164 583.2 434 66.4
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 2.2e-164 582.8 434 65.0
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 8.4e-164 580.9 414 67.4
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.4e-163 580.1 418 64.8
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 1.9e-163 579.7 419 67.8
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.9e-163 579.7 408 67.2
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 2.4e-163 579.3 412 67.0
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 4.2e-163 578.6 419 67.8
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.2e-163 578.6 418 64.8
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 5.4e-163 578.2 436 64.4
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 2.1e-162 576.2 414 67.9
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 2.1e-162 576.2 414 65.9
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 2.7e-162 575.9 459 62.1
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 3.5e-162 575.5 419 66.8
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 4.6e-162 575.1 450 62.9
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 7.8e-162 574.3 419 66.6
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 1.0e-161 573.9 419 66.8
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 1.7e-161 573.2 414 66.9
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 1.7e-161 573.2 414 67.1
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 3.0e-161 572.4 419 66.6
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 3.0e-161 572.4 414 67.1
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 8.7e-161 570.9 420 66.0
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 1.5e-160 570.1 434 62.7
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 1.9e-160 569.7 415 66.3
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 2.5e-160 569.3 413 65.6
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 3.3e-160 568.9 415 65.8
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 4.3e-160 568.5 414 66.7
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 5.6e-160 568.2 407 65.6
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 7.3e-160 567.8 415 66.7
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.1e-159 566.2 414 65.5
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 2.8e-159 565.8 414 66.4
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 3.6e-159 565.5 435 63.2
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 3.6e-159 565.5 414 66.7
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 4.8e-159 565.1 415 66.7
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 4.8e-159 565.1 415 66.7
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 6.2e-159 564.7 408 65.7
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 1.8e-158 563.1 432 61.8
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 1.7e-156 556.6 418 63.6
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 2.4e-155 552.7 421 62.0
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.0e-153 545.8 415 63.1
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 3.0e-153 545.8 415 63.1
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.0e-149 533.1 438 58.2
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.9e-148 528.5 444 59.2
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 5.4e-147 525.0 412 61.9
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 7.1e-147 524.6 414 59.7
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 1.6e-146 523.5 410 62.4
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.7e-146 522.7 414 59.4
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.5e-146 522.3 444 58.1
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 1.9e-144 516.5 406 61.3
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 7.4e-144 514.6 434 60.4
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 2.1e-143 513.1 414 59.2
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 2.1e-143 513.1 415 61.4
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 4.0e-142 508.8 415 58.6
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 6.9e-142 508.1 416 59.9
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 9.3e-139 497.7 446 56.7
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.2e-138 497.3 448 55.8
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 6.0e-138 495.0 426 54.0
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 4.3e-136 488.8 415 56.4
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 9.6e-136 487.6 354 67.5
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.8e-134 483.4 410 58.3
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 9.0e-134 481.1 426 52.6
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.2e-127 459.9 391 56.0
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 2.7e-122 443.0 432 50.7
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 2.2e-119 433.3 405 54.3
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 5.0e-108 395.6 306 63.1
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 5.7e-104 382.1 409 47.7
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 9.7e-104 381.3 409 45.7
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 2.4e-102 376.7 424 44.1
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 7.7e-101 371.7 278 63.7
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 5.0e-100 369.0 298 57.7
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.2e-99 365.9 343 52.2
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.1e-94 349.7 429 45.5
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 4.5e-93 345.9 431 46.4
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 2.9e-92 343.2 409 46.0
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 1.2e-80 304.7 224 63.8
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.4e-78 297.7 288 50.7
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 1.8e-78 297.4 238 60.9
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 7.0e-78 295.4 269 57.2
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 7.8e-53 212.2 136 69.1
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.1e-52 209.5 312 39.4
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.8e-49 201.1 136 66.2
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 1.2e-45 188.3 161 59.6
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.3e-44 184.9 129 62.8
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 1.3e-42 178.3 110 69.1
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 1.9e-38 164.5 145 57.2
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 4.6e-37 159.8 160 56.9
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 1.1e-35 155.2 126 63.5
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 5.6e-35 152.9 402 27.1
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.6e-34 151.4 228 41.7
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 2.4e-30 137.5 138 55.1
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 1.6e-21 108.2 79 65.8
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 5.7e-19 99.8 92 57.6
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.8e-18 97.4 80 61.2
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 3.7e-18 97.1 67 70.1
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 8.2e-18 95.9 81 56.8
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-16 90.9 82 56.1
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-16 90.9 80 58.8
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.2e-15 87.8 85 51.8
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.2e-15 87.8 150 32.7
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-13 82.0 61 70.5
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 2.3e-12 77.8 68 57.4
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 3.7e-10 70.5 59 59.3
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 8.2e-10 69.3 128 34.4
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.1e-09 68.9 60 56.7
SEGI_22616 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.2e-06 57.4 76 35.5
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 7.2e-06 56.2 39 59.0


User provided reference genes

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